3 Dee - Database of Protein Domain Definitions
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The current cluster is formed at a score of 3.036
Ascend tree (bring in more domains)
Classes
% of representative set
undefined
10.00
Membrane and cell surface proteins and peptides
20.00
All alpha
70.00
Breakdown into folds
% of cluster
% of class
undefined
undefined from 3Dee
10.00
0.16
Membrane and cell surface proteins and peptides
Toxins' membrane translocation domains
from SCOP
20.00
18.18
All alpha
Globin-like
from SCOP
70.00
3.45
It is formed by merging the following clusters
Cluster 1
Descend tree into cluster 1
1sgk-2
[
seq. related domains
]
Membrane and cell surface proteins and peptides
Toxins' membrane translocation domains
1lbeb-1
[
seq. related domains
]
undefined
undefined
Cluster 2
Descend tree into cluster 2
1allb-1
[
seq. related domains
]
All alpha
Globin-like
1a0zd-1
[
seq. related domains
]
All alpha
Globin-like
2hbg-1
[
seq. related domains
]
All alpha
Globin-like
1ash-1
[
seq. related domains
]
All alpha
Globin-like
1fslb-1
[
seq. related domains
]
All alpha
Globin-like
1vhbb-1
[
seq. related domains
]
All alpha
Globin-like
2hbib-1
[
seq. related domains
]
All alpha
Globin-like
1colb-1
[
seq. related domains
]
Membrane and cell surface proteins and peptides
Toxins' membrane translocation domains
View superpositions of "checked" domains
Enter PDB code - optionally suffixing the code with the chain id.
3dee@compbio.dundee.ac.uk