3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 3.309

Ascend tree (bring in more domains)

Classes% of representative set
undefined 33.33
Alpha and beta (a/b) 33.33
All alpha 33.33
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 33.33 0.16
Alpha and beta (a/b)
DNA/RNA polymerases Domain III from 3Dee 33.33 0.36
All alpha
Trp repressor from SCOP 33.33 0.49

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

1ktq-4 [seq. related domains] Alpha and beta (a/b) DNA/RNA polymerases Domain III

Cluster 1

Descend tree into cluster 1

1jhga-1 [seq. related domains] All alpha Trp repressor
2ezl-1 [seq. related domains] undefined undefined

View superpositions of "checked" domains

Enter PDB code - optionally suffixing the code with the chain id.

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