3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 1.026

Ascend tree (bring in more domains)

Classes% of representative set
undefined 7.69
Alpha and beta (a/b) 92.31
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 7.69 0.16
Alpha and beta (a/b)
Cytidine deaminase from SCOP 15.38 0.73
Ribonuclease H-like motif from SCOP 76.92 3.65

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

2itg-1 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
1kvc-1 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
1hlua-1 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
1hjrd-1 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
1hkbb-3 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
1vsj-1 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
1bcmb-1 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
2yhx-3 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
1dkgd-1 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
1hmva-5 [seq. related domains] Alpha and beta (a/b) Ribonuclease H-like motif
1hmva-4 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

1af2a-2 [seq. related domains] Alpha and beta (a/b) Cytidine deaminase
1af2a-1 [seq. related domains] Alpha and beta (a/b) Cytidine deaminase

Enter PDB code - optionally suffixing the code with the chain id.

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