3 Dee - Database of Protein Domain Definitions
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The current cluster is formed at a score of 3.544
Ascend tree (bring in more domains)
Classes
% of representative set
undefined
66.67
Alpha and beta (a/b)
33.33
Breakdown into folds
% of cluster
% of class
undefined
undefined from 3Dee
66.67
0.63
Alpha and beta (a/b)
P-loop containing nucleotide triphosphate hydrolases
from SCOP
16.67
0.36
Type I DNA topoisomerase Rossmann-fold like domain from 3Dee
16.67
0.36
It is formed by merging the following clusters
Cluster 1
Descend tree into cluster 1
1ecl-1
[
seq. related domains
]
Alpha and beta (a/b)
Type I DNA topoisomerase Rossmann-fold like domain
1pdo-1
[
seq. related domains
]
undefined
undefined
1e2b-1
[
seq. related domains
]
undefined
undefined
1ad2-2
[
seq. related domains
]
undefined
undefined
Cluster 2
Descend tree into cluster 2
1gky-1
[
seq. related domains
]
Alpha and beta (a/b)
P-loop containing nucleotide triphosphate hydrolases
1delb-1
[
seq. related domains
]
undefined
undefined
View superpositions of "checked" domains
Enter PDB code - optionally suffixing the code with the chain id.
3dee@compbio.dundee.ac.uk