3 Dee - Database of Protein Domain Definitions
[
Search
] [
HELP
]
The current cluster is formed at a score of 3.655
Ascend tree (bring in more domains)
Classes
% of representative set
undefined
8.33
Alpha and beta (a/b)
91.67
Breakdown into folds
% of cluster
% of class
undefined
undefined from 3Dee
8.33
0.16
Alpha and beta (a/b)
Periplasmic binding protein-like II Domain I
from 3Dee
66.67
2.92
Sugar phosphatases alpha/beta C terminal domain
from 3Dee
25.00
1.09
It is formed by merging the following clusters
Cluster 1
Descend tree into cluster 1
1ah5-1
[
seq. related domains
]
Alpha and beta (a/b)
Periplasmic binding protein-like II Domain I
1wdna-1
[
seq. related domains
]
Alpha and beta (a/b)
Periplasmic binding protein-like II Domain I
1inp-2
[
seq. related domains
]
Alpha and beta (a/b)
Sugar phosphatases alpha/beta C terminal domain
1fsab-2
[
seq. related domains
]
Alpha and beta (a/b)
Sugar phosphatases alpha/beta C terminal domain
1awbb-2
[
seq. related domains
]
Alpha and beta (a/b)
Sugar phosphatases alpha/beta C terminal domain
Cluster 2
Descend tree into cluster 2
1sbp-1
[
seq. related domains
]
Alpha and beta (a/b)
Periplasmic binding protein-like II Domain I
1oibb-1
[
seq. related domains
]
Alpha and beta (a/b)
Periplasmic binding protein-like II Domain I
1poy4-1
[
seq. related domains
]
Alpha and beta (a/b)
Periplasmic binding protein-like II Domain I
1a7lc-1
[
seq. related domains
]
Alpha and beta (a/b)
Periplasmic binding protein-like II Domain I
1amf-1
[
seq. related domains
]
Alpha and beta (a/b)
Periplasmic binding protein-like II Domain I
1blf-1
[
seq. related domains
]
Alpha and beta (a/b)
Periplasmic binding protein-like II Domain I
1al3-1
[
seq. related domains
]
undefined
undefined
View superpositions of "checked" domains
Enter PDB code - optionally suffixing the code with the chain id.
3dee@compbio.dundee.ac.uk