3 Dee - Database of Protein Domain Definitions

[Search] [HELP]

The current cluster is formed at a score of 8.044

Ascend tree (bring in more domains)

Classes% of representative set
Peptides 75.00
All alpha 25.00
Breakdown into folds% of cluster % of class
Peptides
Simple helix from 3Dee 75.00 6.12
All alpha
Oligomers of long helices from 3Dee 25.00 0.49

It is formed by merging the following clusters

Cluster 0

All domains in cluster 0 sub-divide into single membered clusters

3mra-1 [seq. related domains] Peptides Simple helix

Cluster 1

Descend tree into cluster 1

1hup-1 [seq. related domains] All alpha Oligomers of long helices
2nr1-1 [seq. related domains] Peptides Simple helix
2mag-1 [seq. related domains] Peptides Simple helix

View superpositions of "checked" domains

Enter PDB code - optionally suffixing the code with the chain id.

3dee@compbio.dundee.ac.uk