3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 7.446

Ascend tree (bring in more domains)

Classes% of representative set
Peptides 87.50
All alpha 12.50
Breakdown into folds% of cluster % of class
Peptides
Simple helix from 3Dee 62.50 10.20
Transmembrane helical fragments from 3Dee 25.00 4.08
All alpha
Oligomers of long helices from 3Dee 12.50 0.49

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1hup-1 [seq. related domains] All alpha Oligomers of long helices
2nr1-1 [seq. related domains] Peptides Simple helix
1pei-1 [seq. related domains] Peptides Simple helix
3mra-1 [seq. related domains] Peptides Simple helix
2mag-1 [seq. related domains] Peptides Simple helix
1btt-1 [seq. related domains] Peptides Transmembrane helical fragments

Cluster 2

Descend tree into cluster 2

1cdlg-1 [seq. related domains] Peptides Simple helix
1btr-1 [seq. related domains] Peptides Transmembrane helical fragments

View superpositions of "checked" domains

Enter PDB code - optionally suffixing the code with the chain id.

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