3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 2.132

Ascend tree (bring in more domains)

Classes% of representative set
undefined 28.57
Small proteins 42.86
All beta 28.57
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 28.57 0.31
Small proteins
Ligand-binding domain of low-density lipoprotein receptor from SCOP 14.29 0.87
Ovomucoid/PCI-1 like inhibitors from SCOP 14.29 0.87
Rubredoxin-like from SCOP 14.29 0.87
All beta
P-loop containing nucleotide triphosphate hydrolases small insert from 3Dee 28.57 0.89

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1ajj-1 [seq. related domains] Small proteins Ligand-binding domain of low-density lipoprotein receptor
1zip-2 [seq. related domains] All beta P-loop containing nucleotide triphosphate hydrolases small insert
1ankb-2 [seq. related domains] All beta P-loop containing nucleotide triphosphate hydrolases small insert
1iro-1 [seq. related domains] Small proteins Rubredoxin-like
1ryt-2 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

1tih-1 [seq. related domains] Small proteins Ovomucoid/PCI-1 like inhibitors
1dar-3 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.

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