3 Dee - Database of Protein Domain Definitions


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The current cluster is formed at a score of 2.173

Ascend tree (bring in more domains)

Classes% of representative set
undefined 40.00
Small proteins 10.00
Alpha and beta (a+b) 10.00
All beta 40.00
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 40.00 0.63
Small proteins
Rubredoxin-like from SCOP 10.00 0.87
Alpha and beta (a+b)
"histone-like" proteins from arhaea from 3Dee 10.00 0.52
All beta
SH3-like barrel from SCOP 40.00 1.79

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1sso-1 [seq. related domains] Alpha and beta (a+b) "histone-like" proteins from arhaea
1pht-1 [seq. related domains] All beta SH3-like barrel
1bib-3 [seq. related domains] All beta SH3-like barrel
1nlpc-1 [seq. related domains] All beta SH3-like barrel
1psf-1 [seq. related domains] All beta SH3-like barrel
1ihwb-1 [seq. related domains] undefined undefined
1vif-1 [seq. related domains] undefined undefined
1bb9-1 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

1acmd-2 [seq. related domains] Small proteins Rubredoxin-like
2rel-1 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.


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