3 Dee - Database of Protein Domain Definitions

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The current cluster is formed at a score of 4.424

Ascend tree (bring in more domains)

Classes% of representative set
undefined 50.00
Alpha and beta (a+b) 50.00
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 50.00 0.47
Alpha and beta (a+b)
Histidine-containing phosphocarrier proteins (HPr) from SCOP 16.67 0.52
KH-domain from SCOP 16.67 0.52
Ribosomal protein L7/12, C-terminal fragment from SCOP 16.67 0.52

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1jem-1 [seq. related domains] Alpha and beta (a+b) Histidine-containing phosphocarrier proteins (HPr)
1ctf-1 [seq. related domains] Alpha and beta (a+b) Ribosomal protein L7/12, C-terminal fragment
5aop-1 [seq. related domains] undefined undefined
5aop-3 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

1vih-1 [seq. related domains] Alpha and beta (a+b) KH-domain
2fmr-1 [seq. related domains] undefined undefined

View superpositions of "checked" domains

Enter PDB code - optionally suffixing the code with the chain id.

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