3 Dee - Database of Protein Domain Definitions


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The current cluster is formed at a score of 2.189

Ascend tree (bring in more domains)

Classes% of representative set
undefined 30.77
Alpha and beta (a+b) 7.69
All beta 61.54
Breakdown into folds% of cluster % of class
undefined
undefined from 3Dee 30.77 0.63
Alpha and beta (a+b)
Cell cycle regulatory proteins from SCOP 7.69 0.52
All beta
Crystallins/protein S from 3Dee 15.38 0.89
Double-stranded beta-helix, jelly-roll domain from 3Dee 7.69 0.45
alpha-Amylase inhibitor from 3Dee 7.69 0.45
alpha-Amylases, beta-sheet domain from 3Dee 30.77 1.79

It is formed by merging the following clusters

Cluster 1

Descend tree into cluster 1

1dktb-1 [seq. related domains] Alpha and beta (a+b) Cell cycle regulatory proteins
2ait-1 [seq. related domains] All beta alpha-Amylase inhibitor
1vjs-3 [seq. related domains] All beta alpha-Amylases, beta-sheet domain
6taa-2 [seq. related domains] All beta alpha-Amylases, beta-sheet domain
1dhka-2 [seq. related domains] All beta alpha-Amylases, beta-sheet domain
1pamb-2 [seq. related domains] All beta alpha-Amylases, beta-sheet domain
2snwb-1 [seq. related domains] undefined undefined
2amg-2 [seq. related domains] undefined undefined

Cluster 2

Descend tree into cluster 2

1a5db-2 [seq. related domains] All beta Crystallins/protein S
1prs-2 [seq. related domains] All beta Crystallins/protein S
1wapv-1 [seq. related domains] All beta Double-stranded beta-helix, jelly-roll domain
1wkt-1 [seq. related domains] undefined undefined
1ag4-1 [seq. related domains] undefined undefined

Enter PDB code - optionally suffixing the code with the chain id.


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