3Dee - Database of Protein Domain Definitions

You have supplied PDB code 1afv

Class	Complex (Viral Capsid/IMMUNOGLOBULIN)
Compound	Mol_id: 1; Molecule: Human Immunodeficiency Virus Type 1 Capsid Protein; Chain: A, B; Fragment: Amino-terminal Domain Residues 1 - 151; Synonym: Hiv-1 Ca, Hiv Ca, Hiv P24, P24; Engineered: Yes; Mol_id: 2; Molecule: Antibody Fab25.3 Fragment; Chain: H, K, L, M; Fragment: Light Chain Residues 1 - 217, Heavy Chain Residues 1 - 220; Synonym: Fab, Fab Light Chain, Fab Heavy Chain
Author	C.Momany,L.C.Kovari,A.J.Prongay,W.Keller,R.K.Gitti, b.M.Lee,A.E.Gorbalenya,L.Tong,J.Mcclure,L.S.Ehrlich, m.F.Summers,C.Carter,M.G.Rossmann
Model type	XRAY
Resolution	3.700000

[PDB file header]

Domain Definitions

Default Definition

This definition is from AUTO.1 produced automatically by alignment with 1gds

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Domain Segment FROM TO See Domain Enter Classification

1afva-1 1 A:1:- A:151:- Rasmol Enter

Class No class name in SCOP or 3Dee

Fold No fold name in SCOP or 3Dee

Domain	Segment	FROM	TO	See Domain	Enter Classification
1afva-1	1	A:1:-	A:151:-	Rasmol	Enter
Class	No class name in SCOP or 3Dee
Fold	No fold name in SCOP or 3Dee

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Domain Definitions

Default Definition

This definition is from AUTO.1 produced automatically by alignment with 1gds

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Domain Segment FROM TO See Domain Enter Classification

1afvb-1 1 B:1:- B:151:- Rasmol Enter

Class No class name in SCOP or 3Dee

Fold No fold name in SCOP or 3Dee

Domain	Segment	FROM	TO	See Domain	Enter Classification
1afvb-1	1	B:1:-	B:151:-	Rasmol	Enter
Class	No class name in SCOP or 3Dee
Fold	No fold name in SCOP or 3Dee

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Domain Definitions

Default Definition

This definition is from AUTO.1 produced automatically by alignment with 8fabc

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Domain Segment FROM TO See Domain Enter Classification

1afvl-1 1 L:3:- L:110:- Rasmol Enter

Class (from SCOP) : All beta

Fold (from SCOP) : Immunoglobulin-like beta-sandwich

1afvl-2 1 L:111:- L:215:- Rasmol Enter

Class (from SCOP) : All beta

Fold (from SCOP) : Immunoglobulin-like beta-sandwich

Domain	Segment	FROM	TO	See Domain	Enter Classification
1afvl-1	1	L:3:-	L:110:-	Rasmol	Enter
Class	(from SCOP) : All beta
Fold	(from SCOP) : Immunoglobulin-like beta-sandwich
1afvl-2	1	L:111:-	L:215:-	Rasmol	Enter
Class	(from SCOP) : All beta
Fold	(from SCOP) : Immunoglobulin-like beta-sandwich

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Domain Definitions

Default Definition

This definition is from AUTO.1 produced automatically by alignment with 1igch

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Domain Segment FROM TO See Domain Enter Classification

1afvh-1 1 H:1:- H:121:- Rasmol Enter

Class (from SCOP) : All beta

Fold (from SCOP) : Immunoglobulin-like beta-sandwich

1afvh-2 1 H:122:- H:220:- Rasmol Enter

Class (from SCOP) : All beta

Fold (from SCOP) : Immunoglobulin-like beta-sandwich

Domain	Segment	FROM	TO	See Domain	Enter Classification
1afvh-1	1	H:1:-	H:121:-	Rasmol	Enter
Class	(from SCOP) : All beta
Fold	(from SCOP) : Immunoglobulin-like beta-sandwich
1afvh-2	1	H:122:-	H:220:-	Rasmol	Enter
Class	(from SCOP) : All beta
Fold	(from SCOP) : Immunoglobulin-like beta-sandwich

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Domain Definitions

Default Definition

This definition is from AUTO.1 produced automatically by alignment with 8fabc

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Domain Segment FROM TO See Domain Enter Classification

1afvm-1 1 M:3:- M:110:- Rasmol Enter

Class (from SCOP) : All beta

Fold (from SCOP) : Immunoglobulin-like beta-sandwich

1afvm-2 1 M:111:- M:215:- Rasmol Enter

Class (from SCOP) : All beta

Fold (from SCOP) : Immunoglobulin-like beta-sandwich

Domain	Segment	FROM	TO	See Domain	Enter Classification
1afvm-1	1	M:3:-	M:110:-	Rasmol	Enter
Class	(from SCOP) : All beta
Fold	(from SCOP) : Immunoglobulin-like beta-sandwich
1afvm-2	1	M:111:-	M:215:-	Rasmol	Enter
Class	(from SCOP) : All beta
Fold	(from SCOP) : Immunoglobulin-like beta-sandwich

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Domain Definitions

Default Definition

This definition is from AUTO.1 produced automatically by alignment with 1igch

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Domain Segment FROM TO See Domain Enter Classification

1afvk-1 1 K:1:- K:121:- Rasmol Enter

Class (from SCOP) : All beta

Fold (from SCOP) : Immunoglobulin-like beta-sandwich

1afvk-2 1 K:122:- K:220:- Rasmol Enter

Class (from SCOP) : All beta

Fold (from SCOP) : Immunoglobulin-like beta-sandwich

Domain	Segment	FROM	TO	See Domain	Enter Classification
1afvk-1	1	K:1:-	K:121:-	Rasmol	Enter
Class	(from SCOP) : All beta
Fold	(from SCOP) : Immunoglobulin-like beta-sandwich
1afvk-2	1	K:122:-	K:220:-	Rasmol	Enter
Class	(from SCOP) : All beta
Fold	(from SCOP) : Immunoglobulin-like beta-sandwich

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