3Dee - Database of Protein Domain Definitions

You have supplied PDB code 1avf

Class	Aspartyl Protease
Compound	Mol_id: 1; Molecule: Gastricsin; Chain: P, A, Q, J; Synonym: Pepsinogen C; Ec: 3.4.23.3; Other_details: Aspartic Proteinase Activation Intermediate
Author	A.R.Khan,M.M.Cherney,N.I.Tarasova,M.N.G.James
Model type	XRAY
Resolution	2.360000

[PDB file header]

Domain Definitions

Default Definition

This definition is from UDE Fri Apr 23 17:04:31 BST 1999

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Domain Segment FROM TO See Domain Enter Classification

1avfp-1 1 P:1:- P:21:- Rasmol Enter

Class No class name in SCOP or 3Dee

Fold No fold name in SCOP or 3Dee

Domain	Segment	FROM	TO	See Domain	Enter Classification
1avfp-1	1	P:1:-	P:21:-	Rasmol	Enter
Class	No class name in SCOP or 3Dee
Fold	No fold name in SCOP or 3Dee

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Domain Definitions

Default Definition

This definition is from AUTO.1 produced automatically by alignment with 1htrb

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Domain Segment FROM TO See Domain Enter Classification

1avfa-1 1 A:2:- A:171:- Rasmol Enter

Class (from SCOP) : All beta
(from 3Dee) : All beta

Fold (from SCOP) : Acid proteases
(from 3Dee) : Acid proteases Domain I

1avfa-2 1 A:172:- A:329:- Rasmol Enter

Class (from SCOP) : All beta
(from 3Dee) : All beta

Fold (from SCOP) : Acid proteases
(from 3Dee) : Acid proteases Domain II

Domain	Segment	FROM	TO	See Domain	Enter Classification
1avfa-1	1	A:2:-	A:171:-	Rasmol	Enter
Class	(from SCOP) : All beta (from 3Dee) : All beta
Fold	(from SCOP) : Acid proteases (from 3Dee) : Acid proteases Domain I
1avfa-2	1	A:172:-	A:329:-	Rasmol	Enter
Class	(from SCOP) : All beta (from 3Dee) : All beta
Fold	(from SCOP) : Acid proteases (from 3Dee) : Acid proteases Domain II

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Domain Definitions

Default Definition

This definition is from UDE Fri Apr 23 17:05:04 BST 1999

[View domains]

Domain Segment FROM TO See Domain Enter Classification

1avfq-1 1 Q:1:- Q:22:- Rasmol Enter

Class No class name in SCOP or 3Dee

Fold No fold name in SCOP or 3Dee

Domain	Segment	FROM	TO	See Domain	Enter Classification
1avfq-1	1	Q:1:-	Q:22:-	Rasmol	Enter
Class	No class name in SCOP or 3Dee
Fold	No fold name in SCOP or 3Dee

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Domain Definitions

Default Definition

This definition is from AUTO.1 produced automatically by alignment with 1htrb

[View domains]

Domain Segment FROM TO See Domain Enter Classification

1avfj-1 1 J:2:- J:171:- Rasmol Enter

Class (from SCOP) : All beta
(from 3Dee) : All beta

Fold (from SCOP) : Acid proteases
(from 3Dee) : Acid proteases Domain I

1avfj-2 1 J:172:- J:329:- Rasmol Enter

Class (from SCOP) : All beta
(from 3Dee) : All beta

Fold (from SCOP) : Acid proteases
(from 3Dee) : Acid proteases Domain II

Domain	Segment	FROM	TO	See Domain	Enter Classification
1avfj-1	1	J:2:-	J:171:-	Rasmol	Enter
Class	(from SCOP) : All beta (from 3Dee) : All beta
Fold	(from SCOP) : Acid proteases (from 3Dee) : Acid proteases Domain I
1avfj-2	1	J:172:-	J:329:-	Rasmol	Enter
Class	(from SCOP) : All beta (from 3Dee) : All beta
Fold	(from SCOP) : Acid proteases (from 3Dee) : Acid proteases Domain II

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