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You have supplied chain B for PDB code 1ber

Class Complex (Gene-regulatory Protein/DNA)
Compound Mol_id: 1; Molecule: Dna (5'-d(*Gp*Cp*Gp*Ap*Ap*Ap*Ap*Gp*Tp*Gp*Tp*Gp*Ap*C)-3'); Chain: C, E; Engineered: Yes; Mol_id: 2; Molecule: Dna (5'-d(*Ap*Tp*Ap*Tp*Gp*Tp*Cp*Ap*Cp*Ap*Cp*Tp*Tp*Tp*Tp*Cp*G)- 3'); Chain: D, F; Engineered: Yes; Mol_id: 3; Molecule: Catabolite Gene Activator; Chain: A, B
Author G.Parkinson,C.Wilson,A.Gunasekera,Y.W.Ebright,R.H.Ebright, h.M.Berman
Model type XRAY
Resolution 2.500000

[PDB file header]

Domain Definitions

Default Definition

This definition is from AUTO.1 produced automatically by alignment with 3gapb

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Domain Segment FROM TO See Domain Enter Classification
1berb-1 1 B:19:- B:134:- Rasmol Enter
Class (from SCOP) : All beta
(from 3Dee) : All beta
Fold (from SCOP) : Double-stranded beta-helix
(from 3Dee) : Double-stranded beta-helix, jelly-roll domain
1berb-2 1 B:135:- B:205:- Rasmol Enter
Class (from SCOP) : All alpha
Fold (from SCOP) : DNA-binding 3-helical bundle

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