3Dee - Database of Protein Domain Definitions

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You have supplied PDB code 1jdb

Class Ligase
Compound Mol_id: 1; Molecule: Carbamoyl Phosphate Synthetase; Chain: B, C, E, F, H, I, K, L; Ec: 6.3.5.5; Biological_unit: Alpha-4/BETA-4 Tetramer; Mol_id: 2; Molecule: Glutamine; Chain: 1, 2, 3, 4, 5, 6, 7, 8; Engineered: Yes
Author J.B.Thoden,H.M.Holden,G.Wesenberg,F.M.Raushel,I.Rayment
Model type XRAY
Resolution 2.100000

[PDB file header]

Domain Definitions

Default Definition

This definition is from UDE Wed Jul 21 10:49:45 BST 1999

[View domains]

Domain Segment FROM TO See Domain Enter Classification
1jdbb-1 1 B:0:- B:116:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbb-2 1 B:117:- B:385:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbb-3 1 B:386:- B:522:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbb-4 1 B:523:- B:661:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbb-5 1 B:662:- B:936:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbb-6 1 B:937:- B:1056:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee

[Show alternative domain definitions for this chain]

Domain Definitions

Default Definition

This definition is from UDE Thu Jul 15 19:53:00 BST 1999

[View domains]

Domain Segment FROM TO See Domain Enter Classification
1jdbc-1 1 C:2:- C:152:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbc-2 1 C:153:- C:380:- Rasmol Enter
Class (from SCOP) : Alpha and beta (a/b)
Fold (from SCOP) : Class I glutamine amidotransferases

[Show alternative domain definitions for this chain]
Domain definitions do not exist for this chain (non-protein or < 20 residues long)
Domain definitions do not exist for this chain (non-protein or < 20 residues long)

Domain Definitions

Default Definition

This definition is from UDE Wed Jul 21 10:56:53 BST 1999

[View domains]

Domain Segment FROM TO See Domain Enter Classification
1jdbe-1 1 E:0:- E:116:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbe-2 1 E:117:- E:385:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbe-3 1 E:386:- E:522:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbe-4 1 E:523:- E:661:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbe-5 1 E:662:- E:936:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbe-6 1 E:937:- E:1056:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee

[Show alternative domain definitions for this chain]

Domain Definitions

Default Definition

This definition is from UDE Thu Jul 15 20:03:18 BST 1999

[View domains]

Domain Segment FROM TO See Domain Enter Classification
1jdbf-1 1 F:2:- F:152:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbf-2 1 F:153:- F:381:- Rasmol Enter
Class (from SCOP) : Alpha and beta (a/b)
Fold (from SCOP) : Class I glutamine amidotransferases

[Show alternative domain definitions for this chain]
Domain definitions do not exist for this chain (non-protein or < 20 residues long)
Domain definitions do not exist for this chain (non-protein or < 20 residues long)

Domain Definitions

Default Definition

This definition is from UDE Wed Jul 21 10:58:55 BST 1999

[View domains]

Domain Segment FROM TO See Domain Enter Classification
1jdbh-1 1 H:0:- H:116:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbh-2 1 H:117:- H:385:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbh-3 1 H:386:- H:522:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbh-4 1 H:523:- H:661:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbh-5 1 H:662:- H:936:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbh-6 1 H:937:- H:1056:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee

[Show alternative domain definitions for this chain]

Domain Definitions

Default Definition

This definition is from UDE Thu Jul 15 20:05:58 BST 1999

[View domains]

Domain Segment FROM TO See Domain Enter Classification
1jdbi-1 1 I:2:- I:152:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbi-2 1 I:153:- I:380:- Rasmol Enter
Class (from SCOP) : Alpha and beta (a/b)
Fold (from SCOP) : Class I glutamine amidotransferases

[Show alternative domain definitions for this chain]
Domain definitions do not exist for this chain (non-protein or < 20 residues long)
Domain definitions do not exist for this chain (non-protein or < 20 residues long)

Domain Definitions

Default Definition

This definition is from UDE Wed Jul 21 11:00:09 BST 1999

[View domains]

Domain Segment FROM TO See Domain Enter Classification
1jdbk-1 1 K:0:- K:116:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbk-2 1 K:117:- K:385:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbk-3 1 K:386:- K:522:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbk-4 1 K:523:- K:661:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbk-5 1 K:662:- K:936:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbk-6 1 K:937:- K:1056:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee

[Show alternative domain definitions for this chain]

Domain Definitions

Default Definition

This definition is from UDE Thu Jul 15 20:07:57 BST 1999

[View domains]

Domain Segment FROM TO See Domain Enter Classification
1jdbl-1 1 L:2:- L:152:- Rasmol Enter
Class No class name in SCOP or 3Dee
Fold No fold name in SCOP or 3Dee
1jdbl-2 1 L:153:- L:380:- Rasmol Enter
Class (from SCOP) : Alpha and beta (a/b)
Fold (from SCOP) : Class I glutamine amidotransferases

[Show alternative domain definitions for this chain]
Domain definitions do not exist for this chain (non-protein or < 20 residues long)
Domain definitions do not exist for this chain (non-protein or < 20 residues long)

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