3Dee - Database of Protein Domain Definitions

You have supplied PDB code 1ppb

Class	Hydrolase(Serine Proteinase)
Compound	Alpha-thrombin (E.C.3.4.21.5) Complex With D-phe-pro-arg Chloromethylketone (Ppack) With Chloromethylketone Replaced By A Methylene Group
Author	W.Bode
Model type	XRAY
Resolution	1.920000

[PDB file header]

Domain Definitions

Default Definition

This definition is from UDE Tue Aug 3 16:42:01 BST 1999

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Domain Segment FROM TO See Domain Enter Classification

1ppbl-1 1 L:1:H L:11:- Rasmol Enter

2 H:23:- H:121:-

3 H:234:- H:247:-

Class (from SCOP) : All beta
(from 3Dee) : All beta

Fold (from SCOP) : Trypsin-like serine proteases
(from 3Dee) : Trypsin-like serine proteases Domain I

1ppbl-2 1 L:12:- L:15:- Rasmol Enter

2 H:16:- H:22:-

3 H:122:- H:233:-

Class (from SCOP) : All beta
(from 3Dee) : All beta

Fold (from SCOP) : Trypsin-like serine proteases
(from 3Dee) : Trypsin-like serine proteases Domain II

Domain	Segment	FROM	TO	See Domain	Enter Classification
1ppbl-1	1	L:1:H	L:11:-	Rasmol	Enter
2	H:23:-	H:121:-
3	H:234:-	H:247:-
Class	(from SCOP) : All beta (from 3Dee) : All beta
Fold	(from SCOP) : Trypsin-like serine proteases (from 3Dee) : Trypsin-like serine proteases Domain I
1ppbl-2	1	L:12:-	L:15:-	Rasmol	Enter
2	H:16:-	H:22:-
3	H:122:-	H:233:-
Class	(from SCOP) : All beta (from 3Dee) : All beta
Fold	(from SCOP) : Trypsin-like serine proteases (from 3Dee) : Trypsin-like serine proteases Domain II

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Domain Definitions

Default Definition

This definition is from UDE Tue Aug 3 16:42:01 BST 1999

[View domains]

Domain Segment FROM TO See Domain Enter Classification

1ppbh-1 1 L:1:H L:11:- Rasmol Enter

2 H:23:- H:121:-

3 H:234:- H:247:-

Class (from SCOP) : All beta
(from 3Dee) : All beta

Fold (from SCOP) : Trypsin-like serine proteases
(from 3Dee) : Trypsin-like serine proteases Domain I

1ppbh-2 1 L:12:- L:15:- Rasmol Enter

2 H:16:- H:22:-

3 H:122:- H:233:-

Class (from SCOP) : All beta
(from 3Dee) : All beta

Fold (from SCOP) : Trypsin-like serine proteases
(from 3Dee) : Trypsin-like serine proteases Domain II

Domain	Segment	FROM	TO	See Domain	Enter Classification
1ppbh-1	1	L:1:H	L:11:-	Rasmol	Enter
2	H:23:-	H:121:-
3	H:234:-	H:247:-
Class	(from SCOP) : All beta (from 3Dee) : All beta
Fold	(from SCOP) : Trypsin-like serine proteases (from 3Dee) : Trypsin-like serine proteases Domain I
1ppbh-2	1	L:12:-	L:15:-	Rasmol	Enter
2	H:16:-	H:22:-
3	H:122:-	H:233:-
Class	(from SCOP) : All beta (from 3Dee) : All beta
Fold	(from SCOP) : Trypsin-like serine proteases (from 3Dee) : Trypsin-like serine proteases Domain II

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Domain Definitions

Default Definition

This definition is from DOMAK

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Domain Segment FROM TO See Domain Enter Classification

1ppbi-1 1 I:1:- I:3:- Rasmol Enter

Class (from SCOP) : All beta
(from 3Dee) : All beta

Fold (from SCOP) : Trypsin-like serine proteases
(from 3Dee) : Trypsin-like serine proteases Domain II

Domain	Segment	FROM	TO	See Domain	Enter Classification
1ppbi-1	1	I:1:-	I:3:-	Rasmol	Enter
Class	(from SCOP) : All beta (from 3Dee) : All beta
Fold	(from SCOP) : Trypsin-like serine proteases (from 3Dee) : Trypsin-like serine proteases Domain II

[Show alternative domain definitions for this chain]

3dee@compbio.dundee.ac.uk