3Dee - Database of Protein Domain Definitions

You have supplied chain D for PDB code 1urp

Class	Transport
Compound	Mol_id: 1; Molecule: D-ribose-binding Protein; Chain: A, B, C, D; Engineered: Yes; Biological_unit: Monomer
Author	A.J.Bjorkman,S.L.Mowbray
Model type	XRAY
Resolution	2.300000

[PDB file header]

Domain Definitions

Default Definition

This definition is from AUTO.1 produced automatically by alignment with 2gbp

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Domain Segment FROM TO See Domain Enter Classification

1urpd-1 1 D:1:- D:103:- Rasmol Enter

2 D:236:- D:270:-

Class (from SCOP) : Alpha and beta (a/b)
(from 3Dee) : Alpha and beta (a/b)

Fold (from SCOP) : Periplasmic binding protein-like I
(from 3Dee) : Periplasmic binding protein-like I Domain I

1urpd-2 1 D:104:- D:235:- Rasmol Enter

2 D:271:- D:271:-

Class (from SCOP) : Alpha and beta (a/b)
(from 3Dee) : Alpha and beta (a/b)

Fold (from SCOP) : Periplasmic binding protein-like I
(from 3Dee) : Periplasmic binding protein-like I Domain II

Domain	Segment	FROM	TO	See Domain	Enter Classification
1urpd-1	1	D:1:-	D:103:-	Rasmol	Enter
2	D:236:-	D:270:-
Class	(from SCOP) : Alpha and beta (a/b) (from 3Dee) : Alpha and beta (a/b)
Fold	(from SCOP) : Periplasmic binding protein-like I (from 3Dee) : Periplasmic binding protein-like I Domain I
1urpd-2	1	D:104:-	D:235:-	Rasmol	Enter
2	D:271:-	D:271:-
Class	(from SCOP) : Alpha and beta (a/b) (from 3Dee) : Alpha and beta (a/b)
Fold	(from SCOP) : Periplasmic binding protein-like I (from 3Dee) : Periplasmic binding protein-like I Domain II

[Show alternative domain definitions for this chain]

3dee@compbio.dundee.ac.uk