3Dee - Database of Protein Domain Definitions

[Search] [HELP]

You have supplied chain L for PDB code 5gds

Class Complex (Serine Protease/INHIBITOR)
Compound Mol_id: 1; Molecule: Alpha-thrombin; Chain: L, H; Ec: 3.4.21.5; Mol_id: 2; Molecule: Hirunorm V; Chain: I; Engineered: Yes
Author G.De simone,A.Lombardi,S.Galdiero,F.Nastri,R.Della morte, n.Staiano,C.Pedone,M.Bolognesi,V.Pavone
Model type XRAY
Resolution 2.100000

[PDB file header]

Domain Definitions

Default Definition

This definition is from UDE.2 Thu Jul 1 12:12:11 BST 1999

[View domains]

Domain Segment FROM TO See Domain Enter Classification
5gdsl-1 1 L:1:H L:11:- Rasmol Enter
2 H:24:- H:121:-
3 H:234:- H:247:-
Class (from SCOP) : All beta
(from 3Dee) : All beta
Fold (from SCOP) : Trypsin-like serine proteases
(from 3Dee) : Trypsin-like serine proteases Domain I
5gdsl-2 1 L:12:- L:15:- Rasmol Enter
2 H:16:- H:23:-
3 H:122:- H:233:-
Class (from SCOP) : All beta
(from 3Dee) : All beta
Fold (from SCOP) : Trypsin-like serine proteases
(from 3Dee) : Trypsin-like serine proteases Domain II

[Show alternative domain definitions for this chain]


Enter PDB code - optionally suffixing the code with the chain id.


3dee@compbio.dundee.ac.uk