3Dee - Database of Protein Domain Definitions

SCOP-like Classification

Membrane and cell surface proteins and peptides

Fold number of domains in representative set number of domains in representative set as a % number of domains in entire database number of domains in entire database as a %

Influenza hemagglutinin (stalk) from 3Dee 1 0.06 37 0.20

Membrane all-alpha from SCOP 2 0.12 36 0.19

Porins from 3Dee 3 0.17 40 0.21

Toxins' membrane translocation domains from SCOP 3 0.17 10 0.05

Variant surface glycoprotein (N-terminal domain) I from 3Dee 1 0.06 2 0.01

Variant surface glycoprotein (N-terminal domain) II from 3Dee 1 0.06 2 0.01

Total 11 0.64 127 0.67

Fold	number of domains in representative set	number of domains in representative set as a %	number of domains in entire database	number of domains in entire database as a %
Influenza hemagglutinin (stalk) from 3Dee	1	0.06	37	0.20
Membrane all-alpha from SCOP	2	0.12	36	0.19
Porins from 3Dee	3	0.17	40	0.21
Toxins' membrane translocation domains from SCOP	3	0.17	10	0.05
Variant surface glycoprotein (N-terminal domain) I from 3Dee	1	0.06	2	0.01
Variant surface glycoprotein (N-terminal domain) II from 3Dee	1	0.06	2	0.01
Total	11	0.64	127	0.67