MsaWSThompson, J.D., Higgins, D.G. and Gibson, T.J. (1994) "CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice." Nucleic Acids Research, 22 4673-4680http://www.compbio.dundee.ac.uk/JalviewWS/services/ClustalWSClustalW Multiple Sequence AlignmentRegoPlease cite the Vamsas project.http://www.compbio.dundee.ac.uk/JalviewWS/services/RegoGetterRegoGetterRegistryThe Vamsas Registry Servicehttp://www.compbio.dundee.ac.uk/JalviewWS/services/ServiceRegistryVamsasRegistrySecStrPredCuff J. A and Barton G.J (2000) Application of enhanced multiple sequence alignment profiles to improve protein secondary structure prediction, Proteins 40:502-511http://www.compbio.dundee.ac.uk/JalviewWS/services/jpredJNet Secondary Structure PredictionMsaWSKatoh, K., K. Kuma, K., Toh, H., and Miyata, T. (2005) "MAFFT version 5: improvement in accuracy of multiple sequence alignment." Nucleic Acids Research, 33 511-518http://www.compbio.dundee.ac.uk/JalviewWS/services/MafftWSMAFFT Multiple Sequence AlignmentMsaWSEdgar, Robert C. (2004), MUSCLE: multiple sequence alignment with high accuracy and high throughput, Nucleic Acids Research 32(5), 1792-97.http://www.compbio.dundee.ac.uk/JalviewWS/services/MuscleWSMuscle Multiple Sequence AlignmentSecStrPredCole, C and Barton G.J (2007) to be publishedhttp://www.compbio.dundee.ac.uk/JalviewWS/services/jpred3JPred3 Secondary Structure Prediction