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# /homes/fmmarquesmadeira/Projects/jabaws/binaries/src/ViennaRNA/H/dist_vars.h

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    00001 #ifndef __VIENNA_RNA_PACKAGE_DIST_VARS_H__
    00002 #define __VIENNA_RNA_PACKAGE_DIST_VARS_H__
    00003
    00015 extern int   edit_backtrack;
    00016
    00021 extern char *aligned_line[4];
    00022
    00029 extern int  cost_matrix;
    00030
    00031 /*  Global type defs for Distance-Package */
    00032
    00033 typedef struct {
    00034                  int  type;
    00035                  int  weight;
    00036                  int  father;
    00037                  int  sons;
    00038                  int  leftmostleaf;
    00039                } Postorder_list;
    00040
    00041 typedef struct {
    00042                  Postorder_list *postorder_list;
    00043                  int            *keyroots;
    00044                } Tree;
    00045
    00046 typedef struct {
    00047                  int    type;
    00048                  int    sign;
    00049                  float  weight;
    00050                } swString;
    00051 #endif