\hypertarget{PS__dot_8h_source}{
\section{/homes/fmmarquesmadeira/Projects/jabaws/binaries/src/ViennaRNA/H/PS\_\-dot.h}
}


\begin{footnotesize}\begin{alltt}
00001 \textcolor{preprocessor}{#ifndef \_\_VIENNA\_RNA\_PACKAGE\_PS\_DOT\_H\_\_}
00002 \textcolor{preprocessor}{}\textcolor{preprocessor}{#define \_\_VIENNA\_RNA\_PACKAGE\_PS\_DOT\_H\_\_}
00003 \textcolor{preprocessor}{}
00004 \textcolor{preprocessor}{#include "\hyperlink{data__structures_8h}{data_structures.h}"}
00005 \textcolor{preprocessor}{#include "\hyperlink{plot__layouts_8h}{plot_layouts.h}"}
00006 
00007 \textcolor{preprocessor}{#ifdef \_\_GNUC\_\_}
00008 \textcolor{preprocessor}{}\textcolor{preprocessor}{#define DEPRECATED(func) func \_\_attribute\_\_ ((deprecated))}
00009 \textcolor{preprocessor}{}\textcolor{preprocessor}{#else}
00010 \textcolor{preprocessor}{}\textcolor{preprocessor}{#define DEPRECATED(func) func}
00011 \textcolor{preprocessor}{}\textcolor{preprocessor}{#endif}
00012 \textcolor{preprocessor}{}
00019 \textcolor{comment}{/* write PostScript drawing of structure to file with annotation */}
00020 \textcolor{keywordtype}{int} PS\_rna\_plot\_snoop\_a(\textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
00021                         \textcolor{keywordtype}{char} *structure,
00022                         \textcolor{keywordtype}{char} *ssfile,
00023                         \textcolor{keywordtype}{int} *relative\_access,
00024                         \textcolor{keyword}{const} \textcolor{keywordtype}{char} *seqs[]);
00025 
00038 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a0873c7cc4cd7a11c9a2cea19dde7e9c9}{PS_rna_plot}(\textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
00039                 \textcolor{keywordtype}{char} *structure,
00040                 \textcolor{keywordtype}{char} *file);
00041 
00060 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a47856b2504b566588785597b6ebb8271}{PS_rna_plot_a}(\textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
00061                   \textcolor{keywordtype}{char} *structure,
00062                   \textcolor{keywordtype}{char} *file,
00063                   \textcolor{keywordtype}{char} *pre,
00064                   \textcolor{keywordtype}{char} *post);
00065 
00066 \textcolor{keywordtype}{int} PS\_rna\_plot\_a\_gquad(\textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
00067                         \textcolor{keywordtype}{char} *structure,
00068                         \textcolor{keywordtype}{char} *ssfile,
00069                         \textcolor{keywordtype}{char} *pre,
00070                         \textcolor{keywordtype}{char} *post);
00071 
00084 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a70834bc8c0aad4fe6824ff76ccb8f329}{gmlRNA}( \textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
00085             \textcolor{keywordtype}{char} *structure,
00086             \textcolor{keywordtype}{char} *ssfile,
00087             \textcolor{keywordtype}{char} option);
00088 
00099 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_add368528755f9a830727b680243541df}{ssv_rna_plot}( \textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
00100                   \textcolor{keywordtype}{char} *structure,
00101                   \textcolor{keywordtype}{char} *ssfile);
00102 
00111 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_ae7853539b5df98f294b4af434e979304}{svg_rna_plot}( \textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
00112                   \textcolor{keywordtype}{char} *structure,
00113                   \textcolor{keywordtype}{char} *ssfile);
00114 
00123 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a2f6d5953e6a323df898896b8d6614483}{xrna_plot}(\textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
00124               \textcolor{keywordtype}{char} *structure,
00125               \textcolor{keywordtype}{char} *ssfile);
00126 
00127 \textcolor{keywordtype}{int} PS\_color\_dot\_plot(\textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
00128                       \hyperlink{structcpair}{cpair} *pi,
00129                       \textcolor{keywordtype}{char} *filename);
00130 
00131 \textcolor{keywordtype}{int} PS\_color\_dot\_plot\_turn( \textcolor{keywordtype}{char} *seq,
00132                             \hyperlink{structcpair}{cpair} *pi,
00133                             \textcolor{keywordtype}{char} *filename,
00134                             \textcolor{keywordtype}{int} winSize);
00135 
00155 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a00ea223b5cf02eb2faae5ff29f0d5e12}{PS_dot_plot_list}( \textcolor{keywordtype}{char} *seq,
00156                       \textcolor{keywordtype}{char} *filename,
00157                       \hyperlink{structplist}{plist} *pl,
00158                       \hyperlink{structplist}{plist} *mf,
00159                       \textcolor{keywordtype}{char} *comment);
00160 
00161 \textcolor{keywordtype}{int} PS\_dot\_plot\_turn( \textcolor{keywordtype}{char} *seq,
00162                       \textcolor{keyword}{struct} \hyperlink{structplist}{plist} *pl,
00163                       \textcolor{keywordtype}{char} *filename,
00164                       \textcolor{keywordtype}{int} winSize);
00165 
00166 \textcolor{keywordtype}{int} PS\_color\_aln( \textcolor{keyword}{const} \textcolor{keywordtype}{char} *structure,
00167                   \textcolor{keyword}{const} \textcolor{keywordtype}{char} *filename,
00168                   \textcolor{keyword}{const} \textcolor{keywordtype}{char} *seqs[],
00169                   \textcolor{keyword}{const} \textcolor{keywordtype}{char} *names[]);
00170 
00174 \textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_aab48d4dac655d688abe921389ac2847c}{aliPS_color_aln}(\textcolor{keyword}{const} \textcolor{keywordtype}{char} *structure,
00175                     \textcolor{keyword}{const} \textcolor{keywordtype}{char} *filename, 
00176                     \textcolor{keyword}{const} \textcolor{keywordtype}{char} *seqs[],
00177                     \textcolor{keyword}{const} \textcolor{keywordtype}{char} *names[]); 
00178 
00179 
00195 DEPRECATED(\textcolor{keywordtype}{int} \hyperlink{PS__dot_8h_a689a97a7e3b8a2df14728b8204d9d57b}{PS_dot_plot}( \textcolor{keywordtype}{char} *\textcolor{keywordtype}{string},
00196                             \textcolor{keywordtype}{char} *file));
00197 \textcolor{preprocessor}{#endif}
\end{alltt}\end{footnotesize}
