\hypertarget{structpf__paramT}{
\section{pf\_\-paramT Struct Reference}
\label{structpf__paramT}\index{pf\_\-paramT@{pf\_\-paramT}}
}


The datastructure that contains temperature scaled Boltzmann weights of the energy parameters.  
Collaboration diagram for pf\_\-paramT:\nopagebreak
\begin{figure}[H]
\begin{center}
\leavevmode
\includegraphics[width=152pt]{structpf__paramT__coll__graph}
\end{center}
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\subsection*{Data Fields}
\begin{DoxyCompactItemize}
\item 
\hypertarget{structpf__paramT_aef40322e7ca1adbd9b438aeda0352e8f}{
double \hyperlink{structpf__paramT_aef40322e7ca1adbd9b438aeda0352e8f}{pf\_\-scale}}
\label{structpf__paramT_aef40322e7ca1adbd9b438aeda0352e8f}

\begin{DoxyCompactList}\small\item\em Scaling factor to avoid over-\//underflows. \item\end{DoxyCompactList}\item 
\hypertarget{structpf__paramT_aa0e11e9f1f6e212640baf40d7195a014}{
double \hyperlink{structpf__paramT_aa0e11e9f1f6e212640baf40d7195a014}{temperature}}
\label{structpf__paramT_aa0e11e9f1f6e212640baf40d7195a014}

\begin{DoxyCompactList}\small\item\em Temperature used for loop contribution scaling. \item\end{DoxyCompactList}\item 
double \hyperlink{structpf__paramT_a3d2af9040acfa08295efb50f0219149d}{alpha}
\begin{DoxyCompactList}\small\item\em Scaling factor for the thermodynamic temperature. \item\end{DoxyCompactList}\item 
\hypertarget{structpf__paramT_a43ec875779c5e7c8bf5fa7e837ec6d09}{
\hyperlink{structmodel__detailsT}{model\_\-detailsT} \hyperlink{structpf__paramT_a43ec875779c5e7c8bf5fa7e837ec6d09}{model\_\-details}}
\label{structpf__paramT_a43ec875779c5e7c8bf5fa7e837ec6d09}

\begin{DoxyCompactList}\small\item\em Model details to be used in the recursions. \item\end{DoxyCompactList}\end{DoxyCompactItemize}


\subsection{Detailed Description}
The datastructure that contains temperature scaled Boltzmann weights of the energy parameters. 

\subsection{Field Documentation}
\hypertarget{structpf__paramT_a3d2af9040acfa08295efb50f0219149d}{
\index{pf\_\-paramT@{pf\_\-paramT}!alpha@{alpha}}
\index{alpha@{alpha}!pf_paramT@{pf\_\-paramT}}
\subsubsection[{alpha}]{\setlength{\rightskip}{0pt plus 5cm}double {\bf pf\_\-paramT::alpha}}}
\label{structpf__paramT_a3d2af9040acfa08295efb50f0219149d}


Scaling factor for the thermodynamic temperature. This allows for temperature scaling in Boltzmann factors independently from the energy contributions. The resulting Boltzmann factors are then computed by $ e^{-E/(\alpha \cdot K \cdot T)} $ 

The documentation for this struct was generated from the following file:\begin{DoxyCompactItemize}
\item 
/homes/fmmarquesmadeira/Projects/jabaws/binaries/src/ViennaRNA/H/\hyperlink{data__structures_8h}{data\_\-structures.h}\end{DoxyCompactItemize}
