\hypertarget{stringdist_8h}{
\section{/homes/fmmarquesmadeira/Projects/jabaws/binaries/src/ViennaRNA/H/stringdist.h File Reference}
\label{stringdist_8h}\index{/homes/fmmarquesmadeira/Projects/jabaws/binaries/src/ViennaRNA/H/stringdist.h@{/homes/fmmarquesmadeira/Projects/jabaws/binaries/src/ViennaRNA/H/stringdist.h}}
}


Functions for String Alignment.  
Include dependency graph for stringdist.h:\nopagebreak
\begin{figure}[H]
\begin{center}
\leavevmode
\includegraphics[width=215pt]{stringdist_8h__incl}
\end{center}
\end{figure}
\subsection*{Functions}
\begin{DoxyCompactItemize}
\item 
\hyperlink{structswString}{swString} $\ast$ \hyperlink{stringdist_8h_a3125991b3a403b3f89230474deb3f22e}{Make\_\-swString} (char $\ast$string)
\begin{DoxyCompactList}\small\item\em Convert a structure into a format suitable for \hyperlink{stringdist_8h_a89e3c335ef17780576d7c0e713830db9}{string\_\-edit\_\-distance()}. \item\end{DoxyCompactList}\item 
float \hyperlink{stringdist_8h_a89e3c335ef17780576d7c0e713830db9}{string\_\-edit\_\-distance} (\hyperlink{structswString}{swString} $\ast$T1, \hyperlink{structswString}{swString} $\ast$T2)
\begin{DoxyCompactList}\small\item\em Calculate the string edit distance of T1 and T2. \item\end{DoxyCompactList}\end{DoxyCompactItemize}


\subsection{Detailed Description}
Functions for String Alignment. 

\subsection{Function Documentation}
\hypertarget{stringdist_8h_a3125991b3a403b3f89230474deb3f22e}{
\index{stringdist.h@{stringdist.h}!Make\_\-swString@{Make\_\-swString}}
\index{Make\_\-swString@{Make\_\-swString}!stringdist.h@{stringdist.h}}
\subsubsection[{Make\_\-swString}]{\setlength{\rightskip}{0pt plus 5cm}{\bf swString}$\ast$ Make\_\-swString (char $\ast$ {\em string})}}
\label{stringdist_8h_a3125991b3a403b3f89230474deb3f22e}


Convert a structure into a format suitable for \hyperlink{stringdist_8h_a89e3c335ef17780576d7c0e713830db9}{string\_\-edit\_\-distance()}. 
\begin{DoxyParams}{Parameters}
\item[{\em string}]\end{DoxyParams}
\begin{DoxyReturn}{Returns}

\end{DoxyReturn}
\hypertarget{stringdist_8h_a89e3c335ef17780576d7c0e713830db9}{
\index{stringdist.h@{stringdist.h}!string\_\-edit\_\-distance@{string\_\-edit\_\-distance}}
\index{string\_\-edit\_\-distance@{string\_\-edit\_\-distance}!stringdist.h@{stringdist.h}}
\subsubsection[{string\_\-edit\_\-distance}]{\setlength{\rightskip}{0pt plus 5cm}float string\_\-edit\_\-distance ({\bf swString} $\ast$ {\em T1}, \/  {\bf swString} $\ast$ {\em T2})}}
\label{stringdist_8h_a89e3c335ef17780576d7c0e713830db9}


Calculate the string edit distance of T1 and T2. 
\begin{DoxyParams}{Parameters}
\item[{\em T1}]\item[{\em T2}]\end{DoxyParams}
\begin{DoxyReturn}{Returns}

\end{DoxyReturn}
