\hypertarget{group__subopt__zuker}{
\section{Suboptimal structures according to Zuker et al. 1989}
\label{group__subopt__zuker}\index{Suboptimal structures according to Zuker et al. 1989@{Suboptimal structures according to Zuker et al. 1989}}
}


Collaboration diagram for Suboptimal structures according to Zuker et al. 1989:\nopagebreak
\begin{figure}[H]
\begin{center}
\leavevmode
\includegraphics[width=252pt]{group__subopt__zuker}
\end{center}
\end{figure}
\subsection*{Functions}
\begin{DoxyCompactItemize}
\item 
\hyperlink{structSOLUTION}{SOLUTION} $\ast$ \hyperlink{group__subopt__zuker_ga0d5104e3ecf119d8eabd40aa5fe47f90}{zukersubopt} (const char $\ast$string)
\begin{DoxyCompactList}\small\item\em Compute Zuker type suboptimal structures. \item\end{DoxyCompactList}\item 
\hypertarget{group__subopt__zuker_ga6d98a9450d1affadf144ac79f543da8c}{
\hyperlink{structSOLUTION}{SOLUTION} $\ast$ \hyperlink{group__subopt__zuker_ga6d98a9450d1affadf144ac79f543da8c}{zukersubopt\_\-par} (const char $\ast$string, \hyperlink{structparamT}{paramT} $\ast$parameters)}
\label{group__subopt__zuker_ga6d98a9450d1affadf144ac79f543da8c}

\begin{DoxyCompactList}\small\item\em Compute Zuker type suboptimal structures. \item\end{DoxyCompactList}\end{DoxyCompactItemize}


\subsection{Function Documentation}
\hypertarget{group__subopt__zuker_ga0d5104e3ecf119d8eabd40aa5fe47f90}{
\index{subopt\_\-zuker@{subopt\_\-zuker}!zukersubopt@{zukersubopt}}
\index{zukersubopt@{zukersubopt}!subopt_zuker@{subopt\_\-zuker}}
\subsubsection[{zukersubopt}]{\setlength{\rightskip}{0pt plus 5cm}{\bf SOLUTION}$\ast$ zukersubopt (const char $\ast$ {\em string})}}
\label{group__subopt__zuker_ga0d5104e3ecf119d8eabd40aa5fe47f90}


Compute Zuker type suboptimal structures. Compute Suboptimal structures according to M. Zuker, i.e. for every possible base pair the minimum energy structure containing the resp. base pair. Returns a list of these structures and their energies.


\begin{DoxyParams}{Parameters}
\item[{\em string}]RNA sequence \end{DoxyParams}
\begin{DoxyReturn}{Returns}
List of zuker suboptimal structures 
\end{DoxyReturn}
