/homes/fmmarquesmadeira/Projects/jabaws/binaries/src/ViennaRNA/H/subopt.h File Reference
RNAsubopt and density of states declarations. More...
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Functions | |
| SOLUTION * | subopt (char *seq, char *structure, int delta, FILE *fp) |
| Returns list of subopt structures or writes to fp. | |
| SOLUTION * | subopt_par (char *seq, char *structure, paramT *parameters, int delta, int is_constrained, int is_circular, FILE *fp) |
| Returns list of subopt structures or writes to fp. | |
| SOLUTION * | subopt_circ (char *seq, char *sequence, int delta, FILE *fp) |
| Returns list of circular subopt structures or writes to fp. | |
Variables | |
| int | subopt_sorted |
| Sort output by energy. | |
| double | print_energy |
| printing threshold for use with logML | |
| int | density_of_states [MAXDOS+1] |
| The Density of States. | |
Detailed Description
RNAsubopt and density of states declarations.
