Results for 8abp


8abp         : NLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDDQFVNAKGKPMDTVPLVMLAATKIGERQGQELYKEMQKRGWDVKESAVMAITANELDTARRRTTGSMDALKAAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQHPEVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGINGVDAVSELSKAQATGFYGSLLPSPDVHGYKSSEMLYNWVAKDVEPPKFTEVTDVVLITRDNFKEELEKKGLGGK : D9083116
D9083116     : NLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDDQFVNAKGKPMDTVPLVMMAATKIGERQGQELYKEMQKRGWDVKESAVMAITANELDTARRRTTGSMDALKAAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQHPEVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGINGVDAVSELSKAQATGFYGSLLPSPDVHGYKSSEMLYNWVAKDVEPPKFTEVTDVVLITRDNFKEELEKKGLGGK : ARAF_ECOLI
ARAF_ECOLI   : NLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDDQFVNAKGKPMDTVPLVMMAATKIGERQGQELYKEMQKRGWDVKESAVMAITANELDTARRRTTGSMDALKAAGFPEKQIYEVPTKSNDIPGAFDAANSMLVQHPEVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGINGVDAVSELSKAQATGFYGSLLPSPDLHGYKSSEMLYNWVAKDVEPPKFTEVTDVVLITRDNFKEELEKKGLGGK : RNPA_CAVPO

             : 2---------12--------22--------32--------42--------52--------62--------72--------82--------92--------102-------112-------122-------132-------142-------152-------162-------172-------182-------192-------202-------212-------222-------232-------242-------252-------262-------272-------282-------292-------302-- :
OrigSeq      : NLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDDQFVNAKGKPMDTVPLVMLAATKIGERQGQELYKEMQKRGWDVKESAVMAITANELDTARRRTTGSMDALKAAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQHPEVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGINGVDAVSELSKAQATGFYGSLLPSPDVHGYKSSEMLYNWVAKDVEPPKFTEVTDVVLITRDNFKEELEKKGLGGK :OrigSeq
cons         : ---EEEEE-------HHHHHHHHHHH------EEEEEEE----HHHHHHHHHHH----EEEEE-------HHHHHHHH----EEEEE---HH---------EEEEHHHHHHHHHHHHHHHHHHHHH----HHHHHHHEEHH--HHHHHH----HHHHHHH------EEEEE----------HHHHHHHH------EEEEEEE----EE-EEEEE-----HHHHHHEEE-----HHHHHHHHHHHHH----------------HHHHHHHHH---------EE-EEEEEE--HHHHHHHHHH---- :cons
dsc          : ----EEE--------HHHHHHHHHHHHHHHHHEEEEEE-----HHHHHHHHHHH----EEEEE--------EEEE------EEEEE----HH---------EEEEHHHHHHHHHHHHHHHHHHHHH----HHHHHHHEEHHHHHHHHHH----HHHHHHH---------------------HHHHHHHH-------EEEEEE------------HHHHHHHHHHHEEE------HHHHHHH----EEEEEE-----------HHHHHHHHH------------EEEEE---HHHHHHHHH----- :dsc
mul          : --HHHEEE-------HHHHHHHHH----HHHHHH--EE-----H-HHHHHHHHH-----EEEE-------HHHHHH------EEEE----HHH-------EEH--HHHHHHH-HHH-HHHHHHH----HHHHHHH---E---HHHH---------HHHHHHHHH--EEEEE----------HHH-HHHHHH----HHHEEE------------------HHHH-EEEE-------HHHHHHH---------------------EEHHHHHHH--H---HHHHHHEEEEE----HHHHHHH----- :mul
nnssp        : ---EEEEE-------HHHHHHHHHHH------EEEEEE-----HHHHHHHHHHH----EEEEE------HHHHHHHHH----EEEEE----------------EEEHHHHH--HHHHHHHHHHHHH---------EEE-----HHHHHHHHH-HHHHHHH-------EEE-----------HHHHHHHHH------EEEEEE-----EE---------------EEEE-----HHHHHHHHHHH------------------HHHHHHHHHH------------EEEE---HHHHHHHH------ :nnssp
phd          : ---EEEEE-------HHHHHHHHHHH------EEEEEEE-----HHHHHHHHHHH----EEEE-------HHHHHHHH----EEEEE--HHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH--HHHHHH-----HHHHHHH-----EEEEE-------HHHHHHHHHHH------EEEEEEEE---EE-EEEEE-----HHHHHHHHH----HHHHHHHHHHHHHH---------------HHHHHHHHHH---------EE-EEEEEE---HHHHHHHHH---- :phd
pred         : ---EEEEE--------HHHHHHHHH-----EEEEEEEEE-----HHHHHHHHHH----EEEEEE--------EEEE-----EEEEEEE--EEE--------EEEEEEEHHHHHHHHHHHHHHHHHH-----EEEEEEEEHHHHHHHEEE----------------EEEEEE----------HHHHHHHEEE----EEEEEEE----EEEEEEEEE------EEEEEEEE----HHHHHHHHHHHHH------------------HHHHHHH-------EEEEEEEEEEEE--HHHHHHHHH---- :pred
zpred        : HHHHHEEE------HHHHHHHHHHHHHHHHHHHHEEEE---HHHHHHHHHHHHHHH--EEEEEE-----HHHHHHHHHHHHEEEEEHHHHHHH-----EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----EHHHHHHHHHHHHEEEE------EEEHHHHHHHHHHHHHHHHHHEEE-----EEEEEEEEEHHHHHHHHEEEEEEE--EEHHHHHHHHHEEEEE------EEE-----EEEHHHHHHH------HHHHHHEEEEHHHHHHHHHHHHHHH-- :zpred


access       : E-EB-BBBEEEEEE--EEEBEBBEEBEEEBBBEBBEBBBEEEEEBBEBBEBBBBEEBEBBBBB-EEEEBBBBBBBEBEE-EBEBBBB-EEBBEBEEEE-E-BBBBBBBBEEBEEEEBEEBBEEBEEEE-EBEEBBBBBBBBEEBEEBEEE-EE-BEBBEBBE-EEE-B-EB-EE-EEBEEBBEBBBBBBBE-EEBEBBBBBBBE-BBBBBBBEBEEEEEBEBBEBBBBBBEBBEBBEEBBEBEBEEBBBBBBEEEE-EB-EBBEBBBEBBBEE-EEEEB-EBBBBBBBB-EEBEEEBEEEEEEEE : access

PHD Rel      : 99346754499785236677778852411341257898679733235899999834881788629933437887787358936887432455268999861378889998862433289999998427555899998887431112422245727999993899765787457689852025788865148841138899862483332234422344311235643155743279999999862112410587675565438999998617899998624227899725543899999853999 : PHD Rel
Pred Rel     : 00880000009099668806876767976565709090000005558098898699998000009999766800959790060000676667579990998588059798888856769909000699867007780078769977067577965867586009706000089890999605676777660958860999008099966065660079885707800080800778478999976677760909997878000587779756689099060078000007006900997700000 : Predator Rel


dssp         : -EEEEEEE-----HHHHHHHHHHHHHHHHH-EEEEEEE---HHHHHHHHHHHHH----EEEEE---HHHHHHHHHHHHH---EEEEE----E-----E-----EEEE-HHHHHHHHHHHHHHHHHHH---HHHEEEEEEE----HHHHHHHHHHHHHHHHH---HHHEEEEE-----HHHHHHHHHHHH-------EEEEE---HHHHHHHHHHHHH----HHHEEEEEE--HHHHHHH-------EEEEEE--HHHHHHHHHHHHHHHHHH------EEEE---EEEE---HHHHHHH------ :dssp
define       : EEEEEEEEE---HHHHHHHHHHHHHHHHHHHEEEEEEE--HHHHHHHHHHHHHHHH---EEEE-----HHHHHHHHHHHHEEEE----EEEEE--------EEEEE-HHHHHHHHHHHHHHHHHHHHH------EEEEE----HHHHHHHHHHHHHHHHHHH----EEEEEEEE--HHHHHHHHHHHHHHHH-----EEEEEEHHHHHHHHHHHHHHHH----EEEEEE-HHHHHHHHHHH--------EEEEEHHHHHHHHHHHHHHHHHH-EEEEEEEEEEEEEEEEE-HHHHHHHHHH---- :define
stride       : --EEEEEE-----HHHHHHHHHHHHHHHHH--EEEEEE---HHHHHHHHHHHHHH---EEEE----HHHHHHHHHHHHHH--EEEEE----E-----E-----EEEE-HHHHHHHHHHHHHHHHHHH---HHHEEEEEEE----HHHHHHHHHHHHHHHHH---HHHEEEEE-----HHHHHHHHHHHHH------EEEEE---HHHHHHHHHHHHHH---HHHEEEEEE----HHHHHH------EEEEEE--HHHHHHHHHHHHHHHHHH------EEEE---EEEE--HHHHHHHHH----- :stride


Q3 values for 8abp  View SS in Rasmol

	dssp	define	stride
phd	65.90	59.02	65.25
dsc	66.56	58.69	67.54
pred	60.00	56.39	59.02
mul	56.72	51.80	57.05
nnssp	71.15	63.93	71.15
zpred	58.03	56.07	60.00
cons	68.52	60.33	68.52