Results for 1ayab-1-GJB


1ayab-1-GJB    : MRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLN : SRK4_SPOLA
SRK4_SPOLA     : AEEWFFGQVKRVDAEKQLMMPNNLGSFLIRDSDTTPGDFSLSVRDIDRVRHYRIKKLEN.GTYFVTRRFQSIQELVAYYTQQADGLCVNLKGPCMVMEKQA : MLAPRO
MLAPRO         : KHSWYHGPVSRNAAE..YLLSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASD.GKLYVSSEFNTLAELVHHHSTVADGLITTLHYPAPKRNK.N : RNU21683
RNU21683       : KMPWFHGNISRDESEQTVLIGKTNGKFLIRARD.NNGSFALCLLHEGKVLHYRIDRDKT.GKLSIPEGFDTLWQLVEHYSYKPDGLLRVLTVPCQKIGVSN : XXXSRC
XXXSRC         : AEEWFFAKITRRDSERMLLALNRRGTFVVRESETTKGAYCLSVLDCDNTKHYKIRKLDS.GGFYITSRFATLQQLVQSYGKHADGLCHTLTDVCPVLKPLS : NCK_HUMAN
NCK_HUMAN      : GNPWYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKET..VYCIGQRFSTMEELVEHYKKAPI...........FTS... : RNU09583
RNU09583       : AEPWFFGAIKRADAEKQLLYSNQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDE.GGFFLTRRFSTLNEFVNYYTTTSDGLCVKLEKPCLKIQVKT : HSU50041
HSU50041       : VPCWNHGNITRSKAEELLSRTK.DGSFLVRASESISRAYALCVLYRNCVYTYRILPNEDDFTVQASEGFTKLDQLIEFYKKEN.GLVTHLQYPVPLEEETG : BLK_MOUSE
BLK_MOUSE      : VEKWFFRTISRKDAERQLLAPNKAGSFLIRESESNKGAFSLSVKDITTQKHYKIRSLDN.GGYYISPRFPTLQALVQHYSKKGDGLCQKLTLPCVNLAPWA : FER_HUMAN
FER_HUMAN      : EQDWYHGAIPRIEAQELLKKQ...GDFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVDN.MYRFEGTGFSNIPQLIDHHYTTKQVITKKSGVVLLNPIP.K : CTK_RAT
CTK_RAT        : LMPWFHGKISGQEAIQQLQPPD..GLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRD..GHLTIDEAFCNLMDMVEHYTRDKGAICTKLVKPKRKQGA.. : HSVAVONCO
HSVAVONCO      : VHLWYAGPMERAGAESILANR.SDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEG..LYRITEKFRGLTELVEFYQQNSLDCFKSLDTTLQFPFK.E : PTNB_RAT
PTNB_RAT       : SRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLPELVQYYMEHHGQLKEKNGDVIELKYPLN : MMU46854
MMU46854       : AEPWYQGEMSRKEAE..ALLRD..GDFLVRKSTTNPGSFVLTGMHNGQAKHLLLVDPE..GTIRTKDRFDSISHLINYHLESSLPIVSAGSELCLQQP... : NRL_2PLDA
NRL_2PLDA      : SKEWYHASLTRAQAEHMLMRVR.DGAFLVRKRN.EPNSYAISFRAEGKIKHCRVQQEGQ.TVMLGNSEFDSLVDLISYYEKHPLYRKMKLRYPINEENS.. : A57463
A57463         : DAEWYWGDISREEVNDKLRDM..DGTFLVRDASTMQGDYTLTLRKGGNNKLIKIYHRDG..KYGFSEPFTSVVELINHYHHESLQYNPKLDVKLTYPVSFQ : NRL_1TCEA
NRL_1TCEA      : GEPWFHGKLSRREAE..ALLQN..GDFLVRESTTTPGQYVLTGSQSGQPKHLLLVDPE..GVVRTKDHFESVSHLISYHMDNHLPIISAGSELCLQQP... : CSK_CHICK
CSK_CHICK      : LMPWFHGKITREQAERLLYPPT..GLFLVRESTNYPGDYTLCVSCEGKVEHYRIIYSS..SKLSIDEEFENLMQLVEHYTTDADGLCSRLIKPKVMEGT.. : PTN6_MOUSE
PTN6_MOUSE     : MVRWFHRDLSGPDAETLLKGRGVPGSFLARPSRKNQGDFSLSVRVDDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGILQDRDGTIIHLKYPLN : I49199
I49199         : TQHWFHGRISREESHRIIKQQLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQTFFTLDFSDLIQLVDFYQLNKGVLPCKLKHHCIRVA... : PIP5_RAT
PIP5_RAT       : SKPWYYDRLSRGEAEDMLMRIR.DGAFLIRKRE.GTDSYAITFRARGKVKHCRINRDGR.HFVLGTSAFESLVELVSYYEKHALYRKMRLRYPVTPELLDI : GRB2_CHICK
GRB2_CHICK     : PHPWFFGKIPRAKAEEMLGKQRHDGAFLIRESESAPGDFSLSVKFGNDVQQFKVLRDGA.GKYLLWVVFNSLNELVDYHRSTSVNQQIFLRDIEQVPQ.DP : MMU37017
MMU37017       : AYPWFAGNMERQQTDNLLKSHS..GTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDS..WIHITEAFESLLELVEYYQCHSLESFKQLDTTLKFPYK.. : DVU22356
DVU22356       : ...WFHGNLSGKEAEKLILERGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRWQDKKYDVGGGESFATLSELIEHYKRH..PMVETCGTVVHLRQPFN : CRKL_HUMAN
CRKL_HUMAN     : RSAWYMGPVSRQEAQTRLQGQ.RHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPN.RRFKIGDQFDHLPALLEFYKIHYLDTTTLIEPAPRYPSPPN : A56040
A56040         : DQPWYFSGISRAQAQQLLLSPNAPGAFLIRPSESSIGGYSLSVRAQAKVCHYRICMAPS.GSLYLQEGFPSLDALLAYYKTNWKLIQNPLLQPCIPQIPLV : GTPA_HUMAN
GTPA_HUMAN     : TNQWYHGKLDRTIAEERLRQAK.SGSYLIRESDRRPGSFVLSFLSQMNVNHFRIIAMCG..DYYIGGRFSSLSDLIGYYSHVSCKG.EKLLYPVAPPEPRR : CELF28B12
CELF28B12      : RQYNFYYRVNGEKAEELLKEYE.DGDFLLRYSESNPQNFSISVRVAEDKLHIKVTKYESDLSIFEDERFGSITELAEFYMEFPEKLREKNGLFLELKKPYV : HUMGRB14R
HUMGRB14R      : SQPWFHHKISRDEAQRLIIQQLVDGVFLVRDSQSNPKTFVLSMSHGQKIKHFQIIPVEDDGEMFHTLDFTDLIQLVEFYQLNKGVLPCKLKHYCARIA... : S37577
S37577         : KQIWYHGAISRGDAENLLRLC..ECSYLVRNSQTSKHDYPLSLRSNQGFMHMKLAKTKE..KYVLGQNFDSVPEVIHYYTTR..KLPIKGAEHLSLLYP.. : A53970
A53970         : DQEWFHPNTTKEQAEQGLYR.LEIGSFLVRPSVQSINAFVISFTINRKIKHCRIMQEG..CLYGIDTMFESLVSLINYYTRNPLNVKLSHPVSQELLRQGH : HSU52518
HSU52518       : PHPWYSGRISRQLAEEILMKRNHLGAFLIRESESSPGEFSVSVNYGDQVQHFKVLREAS.GKYFLWEEFNSLNELVDFYRTTTIKRQIFLRDEEPLLKSSA : SEM5_CAEEL
SEM5_CAEEL     : ECNWYLGKITRNDAEVLLKKPVRDGHFLVRQCESSPGEFSISVRFQDSVQHFKVLRDQN.GKYYLWAVFNSLNELVAYHRTASVTHTILLS...DMNV.NP : DRK_DROME
DRK_DROME      : NHDWYYGRITRADAEKLLSN.KHEGAFLIRISESSPGDFSLSVKCPDGVQHFKVLRDAQ.SKFFLWVVFNSLNELVEYHRTASVSQDVKLR..DMIP..VP : DMU57816
DMU57816       : GKSWYYGAITRSQCDTVLNGHGHDGDFLIRDSETNMGDYSVSLKAPGRNKHFRVHVEQN..MYCIGQRFHSLDQLVDHYQRAPI...........YTN... : B46243
B46243         : GREWYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGRNKHFKVQLVDS..VYCIGQRFHSMDELVEHYKKAPI...........FTS... : CSW_DROME
CSW_DROME      : SRRWFHPTISGIEAEKLLQEQGFDGSFLARLSSSNPGAFTLSVRRGNEVTHIKIQNNGDFFDLYGGEKFATLPELVQYYMEN.GELKEKNGQAIELKQPLI : ABL1_CAEEL
ABL1_CAEEL     : KYTWYHGKISRSDSE..AILGGITGSFLVRESETSIGQYTISVRHDGRVFHYRINVDNT.EKMFITQEFRTLGELVHHHSVHADGLICLLMYPASKKDKNA : ABL_DROME
ABL_DROME      : KHSWYHGPISRNAAE..YLLSGINGSFLVRESESSPGQRSISLRYEGRVYHYRISEDPD.GKVFVTQEFNTLAELVHHHSVPHEGLITPLLYPAPKQNK.E : SRC1_DROME
SRC1_DROME     : SEDWFFENVLRKEADKLLLAENPRGTFLVRPSEHNPNGYSLSVKDWEDGKHYRIKPLDN.GGYYIATNFPSLQALVMAYSKNALGLCHILSRPCPKPQPEL : AB003358
AB003358       : TEEWFFKDLTRKDAERQLLAPNNPGAFLIRESETSKGSYSLSIRDCDPQKHYKIRTLDN.GGYYISPRFTSINEMIQHYQKQADGLCRKLDKPCFSPKPWD : D42125
D42125         : AEPWYFRKIKRIEAEKKLLLPNEHGAFLIRDSESRHNDYSLSVRDGDTVKHYRIRQLDE.GGFFIARRFRTLQELVEHYSKDSDGLCVNLCKPCVQIEKRT : STK_HYDAT
STK_HYDAT      : AEEWYFGDVKRAEAEKRLMVRLPSGTFLIRKAETAVGNFSLSVRDGDSVKHYRVRKLDT.GGYFITTRFNSLYELVQHYTKDADGLVCALTLPCPKDKPIA : CET01E82
CET01E82       : NQPWFSATADKEKAEELLSLVE.DGAFLIRTSSTDSSVYVLSLKVDGEFWHYRLKRDGR..IFVVNQKFENLNQIVEFYANREFGISLRFPVNEKDISHCY : DMU37773
DMU37773       : PMKWYHGNLSREVADELLKQGYEDGTFLVRESRTAAGDFVLSLFCQGEVCHYQVRRHGGEAFFSIDDKLHGLETLVDYYQQAANGLPTKLTVPLIRDLPNT : HT16_HYDAT
HT16_HYDAT     : ALLWYHGKITREVAVQVLLRKGRDGFFLIRDCGNAPEDYVLSMMFRSQILHFQINCLGD.NKFSIDNGFQGLDMLISYYKVISDGLPCKLVDFCVGKIALY : 

               : 3---------13--------23--------33--------43--------53--------63--------73--------83--------93--------1 :
OrigSeq        : MRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLN :OrigSeq
cons           : ----------HHHHHHHHHH------EEEEE-------EEEEEE----EEEEEEE-------EEE---HHHHHHHHHHHHH-------------------- :cons
dsc            : ----------HHHHHHHHHH-----EEEEE--------EEEEEE-----EEEEEE------EEEE---HHHHHHHHHH----------------------- :dsc
mul            : ------------HHHHHHHH------EEEE--------EEEEE-------EEEEE-------EEH----HHHHHHHHH--------H-------------- :mul
nnssp          : ----------HHHHHHHHHH------EEEE--------EEEEEEE---EEEEEEE----------------HHHHHHHHH--------------------- :nnssp
phd            : ----------HHHHHHHHHH------EEEEE-------EEEEEE----EEEEEEEE------EEE---HHHHHHHHHHHHH-----EE------------- :phd
pred           : ---------HHHHHHHHHHH-----EEEEEE-------EEEEEE------EEEEE-----EEEE----HHHHHHHHHHHHH-------------------- :pred
zpred          : -----------HHHHHHHHH-----EEEEE--------EEEEE-----HHEEEEE-------EEE------HHHHHHHH---------------------- :zpred

access : EEEBBBBEBEEEEBEEBBEEEE-EBBBBBEEEEE-EEEBBBBBEBEEEBEBBEBBEEEEEBEBBBBE-BEBBBEBBEBBBE-BEEBBBEBE-BBBBEEEEE : access PHD Rel : 98411255664999999997166884579865789893789997276247999986369961531243235899999774132441211344455557899 : PHD Rel Pred Rel : 00607877768799999987799907888059999990658987777655556877999766677978688889999868777787769988665699000 : Predator Rel

dssp : ----E-----HHHHHHHHHH-----EEEEEE-------EEEEEEE--EEEEEEEEE----EE------E--HHHHHHHHHH----EEE----EE---EE-- :dssp define : ---------HHHHHHHHHHHH---------------EEEEEEEE---EEEEEEEEE---------EEEE-HHHHHHHHHHHHH-EEEE--EEEEEEEEEEE :define stride : ----E-----HHHHHHHHHHH----EEEEEE-------EEEEEEE--EEEEEEEEE----EE------E--HHHHHHHHHH-----EE----E----EE-- :stride
Q3 values for 1ayab-1-GJB View SS in Rasmol dssp define stride phd 83.17 67.33 84.16 dsc 77.23 59.41 78.22 pred 81.19 61.39 82.18 mul 71.29 57.43 72.28 nnssp 84.16 66.34 85.15 zpred 76.24 58.42 77.23 cons 80.20 64.36 81.19