Results for 1bbpa


1bbpa        : NVYHDGACPEVKPVDNFDWSNYHGKWWEVAKYPNSVEKYGKCGWAEYTPEGKSVKVSNYHVIHGKEYFIEGTAYPVGDSKIGKIYHKLTYGGVTKENVFNVLSTDNKNYIIGYYCKYDEDKKGHQDFVWVLSRSKVLTGEAKTAVENYLIGSPVVDSQKLVYSDFSEAACKVN : APD_HUMAN
APD_HUMAN    : QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFEN.GRCIQANYSLMNGKIKVLNQELADGTVNQIEGEATPVNLT..EPAKLEVKFSWFMPSAPYWILATDYENYALVYSCTC.IIQLFHVDFAWILARNPNLPPETVDSLKNILTS.NNIDVKKMTVTD..QVNCPKL : BLC_ECOLI
BLC_ECOLI    : ACSSPTPPRGVTVVNNFDAKRYLGTWYEIARFDHRFERGLEKVTATYSLRDGGLNVINKGYDRGMWQQSEGKAYFTGAP..TRAALKVSFFGPFYGG.YNVIALDR.EYRHALVCGP......DRDYLWILSRTPTISDEVKQEMLAVATR.EGFDVSKFIWVQ..QP...GS : APOD_MOUSE
APOD_MOUSE   : QNFHLGKCPSPPVQENFDVKKYLGRWYEIEKIPASFEK.GNCIQANYSLMNGNIEVLNKELPDGTMNQVKGEAKQSNVS..EPAKLEVQFFPLMPPAPYWILATDYENYALVYSCTT.FFWLFHVDFVWILGRNPYLPPETITYLKDILTS.NGIDIEKMTTTD..QANCPDF : S22400
S22400       : DIFYPGYCPEVKPVDDFDLSAFAGAWHEIAKLPLENENEGKCTVAEYKYDGKKASVYNSFVINGVKEYMEGDLEIAPDAKQGKYVMTFKFGPRVVVQVPWVLATDYKNYAINYNCNYHPDKKAHSIHAWVLSRNKVLEGNTKEVVDNVLKTSHLIDASKFMSNEFSEAACQYS : LAZA_SCHAM
LAZA_SCHAM   : SAQETMGCADRTAINDFNATLYMGKWYEYAKMGSMYEEGGVCVTAEYSMSSNNITVVNSMKTTHEVNTTTGWAEFASEL..TDGKLSVHFPNSPSVGNYWILSTDYDNYSIVWSCVKRPDSAASTEISWILLRSRNSSNMTLERVEDELKN.LQLDLNKYTKTEQSAKYCAGA : S37731
S37731       : GCLG..MPESVKPVSDFELNNYLGKWYEVARLDHSFERGLSQVTAEYRVRDGGISVLNRGYEKGEWKEAEGKAYFVNGS..TDGYLKVSFFGPFYGS.YVVFELDRENYSYAFVSGP......NTEYLWLLSRTPTVERGILDKFIEMSKE.RGFDTNRLIYVQ..LQ..... : CRA2_HOMGA
CRA2_HOMGA   : SFVTAGKCASVANQDNFDLRRYAGRWYQTHIIENAYQPVTRCIHSNYEYSDYGFKVTTAGFPNDEYLKIDFKVYPTKEF...PAAHMLIDAPSVFAAPYEVIETDYETYSCVYSCIT..TDNYKSEFAFVFSRTPQTSGPAVEKTAAVFNK.NGVEFSKFVPVS.HTAECVYR : GALGALL
GALGALL      : SAVHEGKCPDFKPVDNFNLTAYQGVWYEISKTPNDAEKNGKCGQAEYKLEGEVVKVKNSHVVDGVQKYVEGTAKFAEDAKSAKLLVTLTYGAVNRESPLNVIATDYQNYAIAYTCKYDEKSKSHNDSIWILSRAKKLEGDAKTAVDNYLKEAKEIDASKLVQTDFSEEACKFT : MTFAZU1

             : 2---------12--------22--------32--------42--------52--------62--------72--------85--------95--------105-------115-------125-------135-------145-------155-------166-------176 :
OrigSeq      : NVYHDGACPEVKPVDNFDWSNYHGKWWEVAKYPNSVEKYGKCGWAEYTPEGKSVKVSNYHVIHGKEYFIEGTAYPVGDSKIGKIYHKLTYGGVTKENVFNVLSTDNKNYIIGYYCKYDEDKKGHQDFVWVLSRSKVLTGEAKTAVENYLIGSPVVDSQKLVYSDFSEAACKVN :OrigSeq
cons         : -------------------------EEEEEE----------EEEEEEE-----EEEEE-------EEEE---EEE--------EEEEEEE--------EEEEEE----EEEEEEEE----------EEEEEE--------HHHHHHHHHH------EEE-------------- :cons
dsc          : -------------------------EEHHH-------------EEEEE-----EEEEE------HHHHH---EEE------HHEEEEEE-----EEEEEEEE-------EEEEEE-----------EEEEEE---------EEHHHHHHH------HHH-------------- :dsc
mul          : -------------------H------HHHHH------------EEE-------EEEE-----------HH-HH---------HHHEEEEE--------EEEEE-------EEEEEE----------HEEEE---------HHHHHHHHHH---------E-E----------- :mul
nnssp        : --------------------------EE-------------EEEEEEE-----EEEEE-------EEEE---EEE-------EEEEEEEE---------EEE------EEEEEEEE----------EEEEEE--------HHHHHHHHHH----------------------- :nnssp
phd          : -----------------HHHHHH--EEEEEE----------EEEEEEEE----EEEE--------EEEE---EEEE-------EEEEEEE--------EEEEEE---EEEEEEEEE---------EEEEEEE-------HHHHHHHHHHH------EEEEEEE---------- :phd
pred         : ------------------------EEEEEEE------------EEEEE----EEEEE----------------------------EEEEE--------EEEEEE----EEEEEE------------EEEEEE--------HHHHHHHHHH----------------------- :pred
zpred        : EE--------EEEEEEHHH-----HHHEH-----HHH----HEEEEEE-----EEEEEE--------HHHHHHHHHH-----HHHEEEEE---------EEEEE----EEEEEEE----------HHEEEEE--------HHHHHHHHHH---HHHHHEEE------------ :zpred


access       : EEEEEEE-EE-E--EEBEBEE-BBEB-EBBEBEEEBEEE-EBB-BEBEBEEEEBEBBBEEB-EEE-E-BEEEBEB-EE-EE-EB-BEB-BB--B-EBBBBBBB-E-EEBBBBBBBE-EEEEE---EBBBBBBE-EE-EEEB-E-BEEBBEE-EE-EBEEBB--EBEEE-BEEE : access

PHD Rel      : 98667766667877761154553313566632424147881566777546872578614436874121123313316887654378887435367776388873672157898742685766432267877448778632789999986268765312454415761121389 : PHD Rel
Pred Rel     : 00899999900788996666666655888869797979687666666679977999787788988666676867778897668755555779788888668897999856787667777986777559006589888877777777778687687877866777777767000 : Predator Rel


dssp         : -EEEE-------------HHH--EEEEEEEE---------EEEEEEEEE----EEEEEEEEE--EEEEEEEEEEE-------EEEEEEEE--EEEEEEEEEEEE----EEEEEEEEEE----EEEEEEEEEE------HHHHHHHHHHHHH-----HHH-EE----HHHH--- :dssp
define       : EEEE-----EEEEEEEEE-----EEEEE---------------EEEEEEE--EEEEEEE----EEEEEEEE-----------EEEEEEE--EEEEEEEEEE-------EEEEEEEEEE-----EEEEEEEEEE-EEEEEHHHHHHHHHHHHH------EEEEEEEHHHHHH-- :define
stride       : -EEEE-------------HHH--EEEEEEEE---------EEEEEEEEEE--EEEEEEEEEE--EEEEEEEEEEE-------EEEEEEEE--EEEEEEEEEEEE----EEEEEEEEEE----EEEEEEEEEE------HHHHHHHHHHHHH-----HHH-EE----HHH---- :stride


Q3 values for 1bbpa  View SS in Rasmol

	dssp	define	stride
phd	74.57	58.38	73.99
dsc	67.63	57.80	67.05
pred	66.47	58.38	67.05
mul	60.69	53.18	60.12
nnssp	71.10	61.85	70.52
zpred	57.23	54.34	56.65
cons	74.57	58.96	73.99