Results for 1bdo-1-AS


1bdo-1-AS    : EISGHIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE : S66565
S66565       : YSSLPTVKSPMAGTFYRSPGPGEPPFIKVGDKVQKGQVLCIVEAMKLMNEIESDN.GTVVDIVAEM.QPVSLDTPLFVVQ : S66568
S66568       : SFTSSTQESYGLGTFYRSPGPGEPPFVKVGDKVQKGQVVCIIEAMKLMNEIEAEKSGTITELLAEDGKPVSVDTPLFTIV : DCOA_KLEPN
DCOA_KLEPN   : ASAPAAAAPAGAGTPVTAPLAGTIWKVLAGQTVAAGEVLLILEAMKMETEIRAAQAGTVRGIAVKAGDAVAVGDTLMTLA : MTCY7124
MTCY7124     : RKRGAHTGAAASGDAVTAPMQGTVVKFAVGQEVVAGDLVVVLEAMKMENPVTAHKDGTITGLAVEAGAAITQGTVLAEI. : PCCA_RAT
PCCA_RAT     : NKFMLEKVPKDTSSVLRSPKPGVVVAVSVGDMVAEGQEICVIEAMKMQNSMTAGKMGKVKLVHCKAGDTVGEGDLLVELE : ATTS1191
ATTS1191     : R.HFLLLKAPWLATFYRSPAPGEPPFIKVGDKVQKGQVLCIVEAMKLMNEIESDHTGTVVDIVAEDGKPVSLDTPLFVVQ : PYC_HUMAN
PYC_HUMAN    : EMHFHPKALKDVKGQIGAPMPGKVIDIKVGAKVAKGQPLCVLSAMKMETVVTSPMEGTVRKVHVTKDMTLEGDDLILEIE : PYC2_YEAST
PYC2_YEAST   : QSVAKPKADVHDTHQIGAPMAGVIIEVKVGSLVKKGESIAVLSAMKMEMVVSSPADGQVKDVFIKDGESVDASDLLVVLE : BCCP_PROFR
BCCP_PROFR   : RAAGGAGAGKAGEGEIPAPLAGTVSKILVGDTVKAGQTVLVLEAMKMETEINAPTDGKVEKVLVKERDAVQGGQGLIKI. : PYC1_YEAST
PYC1_YEAST   : ETVTKSKADMHDPLHIGAPMAGVIVEVKVGSLIKKGQPVAVLSAMKMEMIISSPSDGQVKEVFVSDGENVDSSDLLVLLE : DUR1_YEAST
DUR1_YEAST   : VKPDEEEDFPEGAEIVYSEYSGRFWKSIAGDVIEAGQGLLIIEAMKAEMIISAPKSGKIIKICHGNGDMVDSGDIVAVIE : ODP2_HAEIN
ODP2_HAEIN   : DQSIINVEGDKASMEVPAPEAGVVKEILVGDKVSTGTPMLVLEAAGAAPAADEPTAP....VADAPTAPVVATAPTAS.. : S16989
S16989       : DDTLLEVQNDKSVEEIPSPVTGTVKNIVVGTVANVGDVLIEIDAPGHEDNDAAPAAP.AQEQTPAQPAAVPTTEAA.... : MCU620574
MCU620574    : GQSLYFVETDKVNSEIPAPVAGKIAVINIGQEIKVGDVVMEIEDG.SDTSATSEP......KAETKSEAKVEVVEENA.. : ODP2_ACHLA
ODP2_ACHLA   : GETLVIVETDKVNAELPSPVDGTIVSLGAGEEIHVGQIIVTIDDG.TGTPAAAPAP..AQVSAPTPAPAAAPQVAAPAA. : CELF27D92
CELF27D92    : LQYMKEKAKVDLSTVVLSPMPGAIKNVNVGDMVSEGQELVVMEAMKMQNSLHAGKTGRVKAVNVKVGATVDEGEVLVELE : REU51439
REU51439     : GAAVRRKAEPGNAAHVGAPMPGVISRVFVGQAVNAGDVLVSIEAMKMETAIHAEKDGTIAEVLVKAGDQIDAKDLLAVYG : CED20232
CED20232     : EIVTRPRALPGVRGHIGAPMPGDVLELKIGDKVTKKQPLFVLSAMKMEMVIDSPIAGTVKAIHAPQGTKCSAGDLVVEVE : D83706
D83706       : AVVEHIKADRTNPNHIAATMPGTVVKVLVGEKVDKGDHLMVTEAMKMETTVQAPFAGVVKDIYVKSGDAIQAGDLLMELS : F64453
F64453       : LKRKKEVITAEMEGAVTSPFRGMVTKIKVGDKVKKGDVIVVLEAMKMEHPIESPVEGTVERILIDEGDAVNVGDVIMIIK : CGU350231
CGU350231    : R.RAGGAKAGVSGDAVAAPMQGTVIKVNVGAEVNEGDTVVVLEAMKMENPVKAHKSGTVTGLTVAAGEGVNKGVVLLEIK : BCCP_STRMU
BCCP_STRMU   : SQTPSPAATASAANTMPAPMPGTILKVLVGDTVSENQPLMILEAMKMENEIVAGMAGTVSAIHVSSGQTVDAGDNLITI. : ATU12536
ATU12536     : QHRTSSETSSHPPGTIVAPMAGLVVKVLVEAKVDQGQPILVLEAMKMEHVVKAPSSGSIQDLKVKAGQQVSDGSALFRIK : MRU8798011
MRU8798011   : .............MEIKSKMPGSIIEVKVGDNLEAGSLILIMEALKMKQEIRSQEGGVVKELKVNTGDRVSPGQVLAIIE : LPOADAGEN
LPOADAGEN    : KIERSSVNNKIGPGDITVAIPGSIIAIHVGDEVKAGQAVLVIEAMKMETEIKAPANGVVAEILCQKGDKVTPGQVLIRVE : BCCP_PORPU
BCCP_PORPU   : STNYATIVSPMVGTFYHSPAPGEKIFVQVGDIVKCNQTVCIIEAMKLMNEIEAEIEGIIIEILVKNGDIVDCGQALMKVE : GMU40666
GMU40666     : KSSLPPLKSPMAGTFYRSPAPGEPSFVKVGDKVKKGQVVCIIEAMKLMNEIEADQSGTIVEIVAEDAKSVSVDTPLFVIQ : BCCP_PSEAE
BCCP_PSEAE   : KLNGNVVRSPMVGTFYRAASPTSANFVEVGQSVKKGDILCIVEAMKMMNHIEAEVSGTIESILVENGQPVEFDQPLFTIV : S74334
S74334       : DQKWTAIVSPMVGTFYRAPAPDEPPFVEVGDAVSKGQGVCIIEAMKLMNEIEAEVAGQVMEIVVENGEPVEYGQTLMWIK : BCCP_ANASP
BCCP_ANASP   : DQKLAEVASPMVGTFYRAPAPGEAVFVEVGDRIRQGQTVCIIEAMKLMNEIEADVSGQVIEILVQNGEPVEYNQPLMRIK : SPU592354
SPU592354    : GEKFLEITAPMVGTFYRAPAPEEPPFVNVGDRIQVGQTVCILEAMKLMNELESEVTGEVVEILVQNGEPVEFNQPLFRLR : BCCP_BACSU
BCCP_BACSU   : DENLHKITSPMVGTFYASSSPEAGPYVTAGSKVNENTVVCIVEAMKLFIEIEAEVKGEIVEVLVENGQLVEYGQPLFLVK : S35195
S35195       : DQHQH.LRAPSVGVFYRAPEPGADPFVAEGDTIRPGQQVGIVEAMKLMIPVKSEIHGRVVEVLKANGDSVEYDEALFAVV : XYNC_FIBSU

             : 77--------87--------97--------107-------117-------127-------137-------147------- :
OrigSeq      : EISGHIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE :OrigSeq
cons         : --------------EE-------EEEEEE--------EEEEEHHHHHHHHH-------EEEEEE----------EEEEE- :cons
dsc          : -------------EEE-------EEEEEE--------EEEEHHHHHHHHH--------EEEEEE----------EEEEE- :dsc
mul          : ---------------E-------EEEEEE--------EEHHHHHHHHHHHHHH-----HH-EEH-----------EEEE- :mul
nnssp        : ------------------------EEEE---------EEEEEHHHHHHHHH-------EEEEEE----------EEEEEE :nnssp
phd          : --------------EEE------EEEEEEEEEEE---EEEEEE------EEE-----EEEEEEE-----E----EEEEE- :phd
pred         : ---EEE-------EEE-------EEEEE---------EEEEHHHHHHHHHHHH-----EEEEEE---------------- :pred
zpred        : HH-----------EEEE-----EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHEEEEH-----EEHHHHHHHHH :zpred

access       : EEEEEEBBBEEBBBBBBBEBEE-BBBBEBBEEBEEBEBBBBBEBBEB-BEBEBEEEEEBBBBBBEEEEEBEBBEBBBEBE : access

PHD Rel      : 99765113577764154469972799984235745966898741554213552798769999853797111473267759 : PHD Rel
Pred Rel     : 00877570998886668999998678667997678965800788808898807777665699958999777888750000 : Predator Rel

dssp         : ----EEEE----EEEE---------------EE----EEEEEEE--EEEEEE----EEEEEE------EE----EEEEE- :dssp
define       : ---EEEEEE---EEEEE----------------------EEEE---EEEEEEE-------EEEE---------EEEEEEE :define
stride       : ----EEEEE---EEEE--------------EEE---EEEEEEEE--EEEEEEE---EEEEEE-----EEE---EEEEEE- :stride

Q3 values for 1bdo-1-AS  View SS in Rasmol

	dssp	define	stride
phd	70.00	61.25	65.00
dsc	62.50	60.00	55.00
pred	57.50	58.75	51.25
mul	51.25	51.25	45.00
nnssp	61.25	61.25	53.75
zpred	28.75	28.75	26.25
cons	62.50	60.00	55.00