Results for 1bncb-1-AS


1bncb-1-AS    : MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETIRLMG : A57710
A57710        : PIHSVLVANNGMAAVKFMRSIREKAILLVAMATPEDLNAEHIRIADQFLEVPGGTNNNNYANVQLIVEIAERTRVSAVWPGWGHASENPELPDALMEKGIIFLGPPSAAMGALG : HFA1_YEAST
HFA1_YEAST    : VISKILIANNGIAAVKEMRSIREKIIQFVVMATPDDLNSEYIRMADQYVQVPGGTNNNNYANIDLILDVAEQTDVDAVWAGWGHASENPCLPELLASSQILFIGPPGRAMRSLG : ATU12536
ATU12536      : CIEKILVANRGEIACRIMRTAKRLGIQTVAVYSDADRDSLHVKSADEADRIGPPAKRLSYLSGVTIMEAAARTGAQAIHPGYGFLSESSDFAQLCEDSGLTFIGPPASAIRDMG : S74380
S74380        : QFAKILIANRGEIALRIIHSCEELGIPTVAVHSTIDRHALHVQLANESVCIGPPPSNKSYLNIPNIIAAALTRNATAIHPGYGFLAENARFAEICADHQITFIGPSPEAITAMG : ACCC_PSEAE
ACCC_PSEAE    : MLEKVLIANRGEIALRILRACKELGIKTVAVHSTADRELMHLSLADESVCIGPAPATQSYLQIPAIIAAAEVTGATAIHPGYGFLAENADFAEQIERSGFTFVGPTAEVIRLMG : TOBBCSO
TOBBCSO       : RAEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSNQSYLVIPNVLSAAISRGCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRVMG : PCCA_RAT
PCCA_RAT      : TFDKILIANRGEIACRVIKTCRKMGIRTVAIHSDVDASSVHVKMADEAVCVGPAPTSKSYLNMDAIMEAIKKTGAQAVHPGYGFLSENKEFAKCLAAEDVTFIGPDTHAIQAMG : PYC1_YEAST
PYC1_YEAST    : K.NKILVANRGEIPIRIFRTAHELSMQTVAIYSHEDRLSTHKQKADEAYVIGEVTPVGAYLAIDEIISIAQKHQVDFIHPGYGFLSENSEFADKVVKAGITWIGPPAEVIDSVG : S71006
S71006        : PLRKVLVANRGEIAVRVIRACRDVGVGSVAVYAEPDVDAVFVRLADEAFGLGGSTAAESYLDIGKVIDAAQRSGADAVHPGYGFLSENADFAQAVLDAGLVWVGPSPEAIRVLG : PYC_MOUSE
PYC_MOUSE     : PIKKVMVANRGEIAIRVFRACTELGIRTVAVYSEQDTGQMHRQKADEAYLIGRGAPVQAYLHIPDIIKVAKENGVDAVHPGYGFLSERADFAQACQDAGVRFIGPSPEVVRKMG : COAC_CHICK
COAC_CHICK    : VIEKVLIANNGIAAVKCMRSIRERAIRFVVMVTPEDLNAEYIKMADHYVPVPGGPNNNNYANVELILDIAKRIPVQAVWAGWGHASENPKLPELLHKNGIAFMGPPSQAMWALG : MTCY7124
MTCY7124      : RISKVLVANRGEIAVRVIRAARDAGLPSVAVYAEPDAESPHVRLADEAFALGGQTSAESYLDFAKILDAAAKSGANAIHPGYGFLAENADFAQAVIDAGLIWIGPSPQSIRDLG : BNACCG8
BNACCG8       : PIHRILVATNGMAAVKFIRSVREKSISLVAMATPEDMNAEHIRIADQFMQVPGGTNNNNYANVHLIVEMAEATGVDAVWPGWGHASENPELPDALKAKGVIFLGPTAASMLALG : ACCC_BACSU
ACCC_BACSU    : MIKKLLIANRGEIAVRIIRACRELGIETVAVYSEADKDALHVQMADEAFCIGPKASKDSYLNVTNIVSVAKLTGTDAIHPGYGFLAENADFAELCEEVNVTFVGPSADAISKMG : S73055
S73055        : MFSKVLVANRGEIAIRAFRAAYELGVGTVAVYPYEDRNSQHRLKADESYQIGDIHPVHAYLSVDEIVATARRAGADAIYPGYGFLSENPDLAAACAAAGISFVGPSAEVLELAG : DUR1_YEAST
DUR1_YEAST    : LFDTVLIANRGEIAVRIIKTLKKLGIRSVAVYSDPDKYSQHVTDADVSVPLHGTTAAQTYLDMNKIIDAAKQTNAQAIIPGYGFLSENADFSDACTSAGITFVGPSGDIIRGLG : D64453
D64453        : MFNKVLIANRGEIAIRIIRACWELGIKTVAVYSEADKRSLHATLADEAYCIGPAPAAKSYLNIDAILNVAEKAKVDAIHPGYGFLAENAEFARAVKKAGFEFIGPNPDAIEAMG : CEF26D10
CEF26D10      : SIKRILVANNGLAAMKCLISIRSGVVSFVCIATEDEMASHYLKLADEIVMAPAGSNSKNFANCDVIIRLAVEAQVDAVYVGWGHASENPELCRRLELNNIIFIGPSEKSIIASG : ZMU19183
ZMU19183      : PIHSILVANNGMAAAKFMRSVREKAIQLIAMATPEDMNAEHIRIADQFVEVPGGTNNNNYANVQLIVGMAQKLGVSAVWPGWGHASENPELPDALTAKGIVFLGPPASSMNALG : A48757
A48757        : VIRKVLIANNGMAATKSILSMRERAIQFVAMATPEDLNAEFIRLADSFVEVPGGKNLNNYANVDVITRIAKEQGVDAVWPGWGHASENPKLPNALDKLGIKFIGPTGPVMSVLG : S60200
S60200        : VITKVLICNNGIAAVKEIRSIRERAIEFTVMATPEDLNADYIRMADQYVEVPGGSNNNNYANVDLIVDVAERAGVHAVWAGWGHASENPRLPESLAASKIIFIGPPGSAMRSLG : D78169
D78169        : VITSILIANNGIAAVKEIRSIRERAIKFTVMATPDDLNADYIRMADQYVEVPGGSNNNNYANVELIVDIAERMNVHAVWAGWGHASENPKLPEMLSASSIVFIGPPGSAMRSLG : BCCA_MYCTU
BCCA_MYCTU    : MFDTVLVANRGEIAVRVIRTLRRLGIRSVAVYSDPDVDARHVLEADAAVRLGPAPARESYLDIGKVLDAAARTGAQAIHPGYGFLAENADFAAACERARVVFLGPPARAIEVMG : CGU350231
CGU350231     : KITKVLVANRGEIAIRVFRAARDEGIGSVAVYAEPDADAPFVSYADEAFALGGQTSAESYLVIDKIIDAARKSGADAIHPGYGFLAENADFAEAVINEGLIWIGPSPESIRSLG : GMU34393
GMU34393      : .......ANRGETLLRVIRTCREMGIKTVAVYSTADKDSLHVRFADEAACIGKPAGVDSYLNIPHIMAAAEITNADAVHPGYGFLAENAKFSQICADHGIKFIGPTPDMINNMG : CELF27D92
CELF27D92     : KFDKILIANRGEIACRVIKTARAMGIKTVAVHSDVDSNSLHVKMADEAVCVGEAPTAKSYLRADRILQAVEDTGAQAVHPGYGFLSENTKFAAELEKAGAKFIGPNSKAILDMG : CEF32B6
CEF32B6       : PIQRVLVANRGEIAIRVQNTARKMGIETVAVFSDADRNSLFVKKADKAYHIGPPLAAESYLNMDKIINSALRSGAQAIHPGYGFLSENAGFAEKCAQAGLVFIGPPAQAIRDMG : D78170
D78170        : KFTKVLVANRSEIAIRVFRTAHELSMHTVAIYSYEDILSMHRQKADESYPIGKVSPVGAYLAIDEIVSIAKRTGANLVHPGYGFLSENAEFARKVNEAGMQFVGPSPEVIDSLG : PPPYC1
PPPYC1        : M.NKILVANRGEIPIRIFRTAHELSMNTVAIYSHEDRLSMHRLKADEAYVIGERSPVQAYLAIDEIIKIAVKHNVNMIHPGYGFCSENSEFARKVEENGILWVGPSDTVIDAVG : D83706
D83706        : RIRKVLVANRGEIAIRVFRACTELGIRTVAIYSKEDVGSYHRYKADEAYLVGEGKPIEAYLDIEGIIEIAKAHDVDAIHPGYGFFSENIQFAKRCREEGIIFFGPNENHLDMFG : MQSPYRCARB
MQSPYRCARB    : PIRSVLVANRGEIAIRVFRACNELGIRSVAVYSEQDKMHMHRQKADESYMVGKGAPVEAYLSIPEIIRVCKENDVDAVHPGYGFLSERSDFAQAVIDAGLRFIGPSPKVVQQMG : REU51439
REU51439      : PISKILVANRSEIAIRVFRAANELGIKTVAIWAEEDKLALHRFKADESYQVGRGGPIESYLSIDEVIRVAKLSGADAIHPGYGLLSESPEFVDACNKAGIIFIGPKADTMRQLG : CED20232
CED20232      : EFNKVMVANRGEIAIRVFRALTELNKTSVAIYAEQDKNSMHRLKADEAYLVGKGPPVAAYLTIDQIIETALKHNIDAIHPGYGFLSERSDFAAACQNAGIVFIGPSPDVMARMG : XYNC_FIBSU

              : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111- :
OrigSeq       : MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETIRLMG :OrigSeq
cons          : --EEEEE----HHHHHHHHHHHHH--EEEEEE----HHHHHHHHHHHHHH--------HHHHHHHHHHHHHHH---------------HHHHHHHHH---EEE----HHHH--- :cons
dsc           : --HHHHHH---HHHHHHHHHHHH--HHHHH---HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHH--EEE-----HHHH--- :dsc
mul           : H-HEEEE-----HHHHHHHHH----HEEEEEE------HHHHHHHHHHHEE-----------HHHHHHHHHH------------------HHHHHHH--EEEE------EEE-- :mul
nnssp         : ---EEEEE---HHHHHHHHHHHH----EEEEE----HHHHHHHHHH-EEE---------HHHHHHHHHHHHH----EE----------HHHHHHHHH---EEE----HHHHHHH :nnssp
phd           : --EEEEE----HHHHHHHHHHHHH--EEEEEE------HHHHHHHHHHHH--------HHHHHHHHHHHHHHH---------------HHHHHHHHH---EEE----------- :phd
pred          : ----EEE----HHHHHHHHHHHHH--EEEEEEE-----HHHHHHH--EEE-----------HHHHHHHHHHH-----------------HHHHHHHH--EEEE----------- :pred
zpred         : HHEEEEEHHHHHHHHHHHHHHH---HEEEEEE-HHHHHHHHHHHHHHHEE-------EEEEEEHHHHHHHHH---EEEEEEE---EHHHHHHHHHHH--EEEE-----EEEEEH :zpred


access        : EBEEBBBBEEBEBBBEBB-BBEEBBBEBBBBBBEEE-EBBBBEBBEEBBBBBEE-EBEBBBBBEBBBEBBEEBBBEBBBBB-BBBBEEBEBBEBBEEBBBBBBBEEBEBBEEBE : access

PHD Rel       : 932789716642578999999983755899971366414688754466551689752123657999999999476111168522344525999996527347749811211469 : PHD Rel
Pred Rel      : 007780056978787999999995065680066977777887785776667899999765668887889887776560899977669006789988676709009990677000 : Predator Rel


dssp          : ---EEEE---HHHHHHHHHHHHHH--EEEEEEE------HHHHH--EEEEEE----------HHHHHHHHHHH---EEE---------HHHHHHHHH---EE----HHHHHHHH :dssp
define        : ----------HHHHHHHHHHHHHHEEEEEEEEE-----HHHHHHH--EEEE----------HHHHHHHHHHHHEEEEEEE-------HHHHHHHHHHHHEEEE--HHHHHHHHH :define
stride        : ---EEEE---HHHHHHHHHHHHHH--EEEEEEE------HHHHH--EEEEEE---HHH----HHHHHHHHHHH---EEE---------HHHHHHHHHH--EE----HHHHHHH- :stride


Q3 values for 1bncb-1-AS  View SS in Rasmol

	dssp	define	stride
phd	75.44	66.67	72.81
dsc	59.65	57.89	58.77
pred	79.82	75.44	77.19
mul	71.93	64.04	69.30
nnssp	82.46	74.56	78.07
zpred	60.53	58.77	57.02
cons	77.19	68.42	74.56