Results for 1cem-1-GJB


1cem-1-GJB    : AGVPFNTKYPYGPTSIADNQSEVTAMLKAEWEDWKSKRITSNGAGGYKRVQRDASTNYDTVSEGMGYGLLLAVCFNEQALFDDLYRYVKSHFNGNGLMHWHIDANNNVTSHDGGDGAATDADEDIALALIFADKQWGSSGAINYGQEARTLINNLYNHCVEHGSYVLKPGDRWGGSSVTNPSYFAPAWYKVYAQYTGDTRWNQVADKCYQIVEEVKKYNNGTGLVPDWCTASGTPASGQSYDYKYDATRYGWRTAVDYSWFGDQRAKANCDMLTKFFARDGAKGIVDGYTIQGSKISNNHNASFIGPVAAASMTGYDLNFAKELYRETVAVKDSEYYGYYGNSLRLLTLLYITGNFPNPLSDL : GUN2_CLOJO
GUN2_CLOJO    : KGFPYNATYPYGAYSLADSQSSANNLLKSEWEQWKSAHITSNGARGYKRVQRDASTNYDTVSEGLGYGMLLAVYFGEQQLFDDLYRYVKVFLNSNGLMSWRIDANGNIMGQN.AIGAATDADEDIAVSLVFAHKKWGTSGGFNYQTEAKNYINNIYNKMVEPGTYVLKPGDMWGGSDVTNPSYFAPAWYRIFADFTGNSGWINVANKCYEIADKAR..NSNTGLVPDWCTANGTPASGQGYDFYYDAIRYQWRTAIDYSWYGTAKAKTHCDAISNFFKNIGYPNIKDGYTLSGSQISANHTATFVSCAAAAAMTGTDATYAKNIYNECVKVKDTGNYTYFGNTLRMMILLYTTGNFPNLYSDI : GUNY_ERWCH
GUNY_ERWCH    : MGKPMWRCWALMLMVFSASATAANG.....WEIYKSRFMT...TDGRIQDTG...NKNVSHTEGQGFAMLMAVHYDDRIAFDNLWNWTQSHLRNTTLFYWRYDPSAANPVVD..KNNASDGDVLIAWALLKAGNKWQDNR...YLQASDSIQKAIIASNIIQGRTVMLPGA.YGFNVILNPSYFLFPAWRDFANRSHLQVWRQLIDDSLSLVGEMR..FGQVGLPTDWAALNAAPATAWPSRFSYDAIRIPL.....YLYWYDAKTTALVPFQLYWRNYLTTPAWVDVLSSN.TATYNMQGGLLAVRDLTMGNLD........GLSDLPGAS....EDYYSSSLRLLVMLAR.GK........ : GUB_BACCI
GUB_BACCI     : KNFPQHTTYTSGSIKNHVTQSAMDSSVKAKWDSWKSAYLKTAGTGKYYVKYQ...SNGDTVSEAHGYGMLATVIMAAQTYFDGLYQYYKAHPSANNLMAWKNSSFQNIEGAD....SATDGDMDIAYSLLLADKQWGSSGSINYLQAGKDIINAIMQSDVNQSQWTLRLGD.WATDNATRPSDFMLNHLKAFQAATGDARWANVIDKTYTIINSLYSYSSSTGLLPDFVVLSGKPASGANGSYDYNSCRTPWRIATDYLMTGDSRALNQLNQMNSWISASGNPNVKDGYKLNGTVTGSGGSGAFYAPFGVSAMTSVNQNWLNSVWTKTAGSS...NEGYYEDSIKLFSMIVMSGNWWTY.... : GUN_BACSP
GUN_BACSP     : EKFPQQVNYSGILKPNHVSQESLNNAVKNYYNDWKKKYLKSSLPGGYYVKGEITGFRPLGTSEGQGYGMIITVLMAAQTIYDGLFKTARAFKSSINLMGWVADDKKAQGHFD....SATDGDLDIAYSLLLAHKQWGSSGKINYLKEAQNMITKGIKASNVTKNNGLNLGD.WGDKFDTRPSDWMMSHLRAFYEFTGDKTWLNVIDNLYNTYTNFTNYSPKTGLISDFVVKNPQPAPSKYDSYYYNASRVPLRIVMDYAMYGEKRGKVISDKVATWIKSKGNPKIVDGYKLDGTNIGDYPTAVYVSPFIAAGTTNKNQEWVNSGWDWMKNKK....ESYFSDSYNLLTMLFLTGNWWKPIPDE : B48939

              : 33--------43--------53--------63--------73--------83--------93--------103-------113-------123-------133-------143-------153-------163-------173-------183-------193-------203-------213-------223-------233-------243-------253-------263-------273-------283-------293-------303-------313-------323-------333-------343-------353-------363-------373-------383-------393 :
OrigSeq       : AGVPFNTKYPYGPTSIADNQSEVTAMLKAEWEDWKSKRITSNGAGGYKRVQRDASTNYDTVSEGMGYGLLLAVCFNEQALFDDLYRYVKSHFNGNGLMHWHIDANNNVTSHDGGDGAATDADEDIALALIFADKQWGSSGAINYGQEARTLINNLYNHCVEHGSYVLKPGDRWGGSSVTNPSYFAPAWYKVYAQYTGDTRWNQVADKCYQIVEEVKKYNNGTGLVPDWCTASGTPASGQSYDYKYDATRYGWRTAVDYSWFGDQRAKANCDMLTKFFARDGAKGIVDGYTIQGSKISNNHNASFIGPVAAASMTGYDLNFAKELYRETVAVKDSEYYGYYGNSLRLLTLLYITGNFPNPLSDL :OrigSeq
cons          : -------------------HHHHHHHHHHHHHHHHHHHEE------EEEEE-----------------EEEEEHHHHHHHHHHHHHHHHH-------EEEEE-------------------HHHHHHHHHHHHH---------HHHHHHHHHHHHHH-------EEE----------------HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH---------------------------EE------HHHHHHHHHE-------HHHHHHHHHHH----------EE------------EEEEE--EE-----HHHHHHHHHHEEE-----------HHHHHHEEEE------------ :cons
dsc           : -------------------HHHHHHHHHHHHHHHHHHH---------EEEE---------HHHHH---EEEHHHHHHHHHHHHHHHHHHH--------EEE--------------------HHHHHHHHHHHHH--------HHHHHHHHHHHHHH--------------------------HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH------------EE------------EEE-HH--HHHHHHHHHHH--------HHHHHHHHHH------------------------HHHHHHHHH---HHHHHHHHHHHHEEEE-----EEE--HHHHHHHHHH------------ :dsc
mul           : --------------------------HHHH-HH--H-------------------------------HHHHHHHHHHHHHHHH-HHE-----------HH----------------------HHHHHHHHHH--------------H--HHHHH----------EEEE----------------HHHHHHHHHH-------HHH------HHHH-------------------------------------EEEEEEEE-------HHHHHHHHHHH--------E----------------EEEEE------------------H------------------HHHHHH-E----------- :mul
nnssp         : -------------------HHHHHHHHHHHHHHH----EE-------EEE------------------EEEEE----HHHHHHHHHHHHH-------EEEE---------------------HHHHHHHHHH-----------HHHHHHHHHHHHHH-------EEE-------------------HHHHHHH-------HHHHHHHHHHHHHHH----------------------------EE-------EEEE---------HHHHHHHHHHHHHH----------EE-----------EEE------------HHHHHHHHHHHEE----------------EEEEE------------ :nnssp
phd           : -------------------HHHHHHHHHHHHHHHHHHHEEE-----EEEEE-----------------EEEEEHHHHHHHHHHHHHHHHHHH----EEEEEE-------------------HHHHHHHHHHHHHH---------HHHHHHHHHHHHHH-----EEEE----------------HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH----------------------------------HHHHHHHHHEE------HHHHHHHHHH--------E--EE---EE-------EEEEE--EE-----HHHHHHHHHHEE----------HHHHHHHHEEEEEE---------- :phd
pred          : --------------------HHHHHHHHHHHHHHHH----------EEEEEE------------------EEE---HHHHHHHHHHHHHH-------EEEEE--------------------HHHHHHHHHHH----------HHHHHHHHHHHHHH-------EEE------------------HHHHHHHHHH------------HHHHHHHH------------EEE---------------------HHHHHHH------HHHHHHHHHHHHHH------------------------EEE-------------HHHHHHHHHH---------------HHHHHEEE------------ :pred
zpred         : -------EE----------HHHHH-----HHHHHHH----------EEEEE---------EEE---HHEEEEHHHHHHHEEHHHHHEEEE------EEEEE----------------HHHHHHHHHHHHHHHH----------EEHHHHHHEEEEE--EE----EEEEE--------------EEEHHHHHHE-------EEEEE---EEEEEEE-------EEEEEEEEE-----EEE--EEEEEEEEE-------EE-HHHHHHHHEEEEHEEEE-------EEEEEE-----------EEEEEEHHHHHE------------HHH--------------HHHEEEEEE------------ :zpred


access        : EE-EEBBBBBBBBBBBBBBEEBBEEBBEBEBEEBEEE-BEBEBEEE--BBBEEBBEE--BBBEB-B-BBBBBBBBBBEBBBEEBBEBBEBBBEBBBBBBB-BEBEEBBBB-EEBEEBBEEBE-BBBBBBBBBEEEBEEEEBBBBBEEBEEBBEBBBBBBBEEBEBBB-BEE-BBBEEBE-BB-BBBBBBEBBBEBEEEE-BBEBBEEBBEBBEEB-E-BEEEBBBBEBBBBEEEEBEEEEBEBB-EBB-BBB-BBBBBBBBBEEEBEBBBEBBBEBBE-EE-EEBBEBBEBEBEBBBEE-BBBBBBBBBBBBBEE-E-EBBEEBBEEBBE-EEEEE-BBB-EBBEBBBBBBBBEEBBEBBEEE : access

PHD Rel       : 999853325555423454246799899998999865532424788627774156677774431223321233211146889999999998721453167763355665467897654123147899999999875266787442588999999986421224515324575435455679542247999999994344147688888999999998626888333421122589887888754332332222232121111112321024567864321578753014221541231377731365322120266332577654543111258885321144434521232113565566899 : PHD Rel
Pred Rel      : 008999900009977880667777999999985550655699999867688078889776779966666076666778776768888776799999665887899998888899998899777889989907777999997755667788897756866787876568899988997700999777888777786799655557777888777775689999678877657999999999677788867666566555566977765676678877757999778777777887077899875776676655669697767687755575769999967789789977777669990000000 : Predator Rel


dssp          : -------------------HHHHHHHHHHHHHHHHHHHEE--------EE---HHH---EEHHHHHHHHHHHHH---HHHHHHHHHHHH--E-----E--EE-----E---------EHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHE------E--E----E--EE-HHH--HHHHHHHHHHH---HHHHHHHHHHHHHHHH-------------E-------------E---HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH---HHH----E-----E------HHHHHHHHHHHHH---HHHHHHHHHHHHH----HHH--HHHHHHHHHHHHH----------- :dssp
define        : ---------------------HHHHHHHHHHHHHHHHHH---------EEEEE----EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---EEEEEEEE-----------EEEEHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH-------EEEE---------------HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH------EEEEE---------------------HHHHHHHHHH----HHHHHHHHHHHHHHHHH----EEEE--------EEEEE----HHHHHHHHH---HHHHHHHHHHHHHHEEEE----HHHHHHHHHHHHHHHH--------- :define
stride        : -------------------HHHHHHHHHHHHHHHHHHHEE--------EE---HHH---EEHHHHHHHHHHHHHH--HHHHHHHHHHHHH-EE---EEE-EEE---EE--------EEHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHEE----EE--E--E-E--EE-HHH--HHHHHHHHHHH--HHHHHHHHHHHHHHHHHH------------E-----E-------E----HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH---------E-----E--------HHHHHHHHHH----HHHHHHHHHHHHH----HHH-HHHHHHHHHHHHHHH---------- :stride


Q3 values for 1cem-1-GJB  View SS in Rasmol

	dssp	define	stride
phd	71.90	72.45	73.28
dsc	77.13	74.66	77.41
pred	70.80	68.87	69.42
mul	60.06	59.50	58.40
nnssp	68.32	64.46	67.49
zpred	53.17	54.27	52.07
cons	72.45	71.35	73.55