Results for 1cewi-1-DOMAK


1cewi-1-DOMAK    : GAPVPVDENDEGLQRALQFAMAEYNRASNDKYSSRVVRVISAKRQLVSGIKYILQVEIGRTTCPKSSGDLQSCEFHDEPEMAKYTTCTFVVYSIPWLNQIKLLESKCQ : KNL_RAT
KNL_RAT          : PGCPRNIPVDPELKEALGHSIAQLNAENNHTFYFKIDTVKKATSQVVAGTKYVIEFIARETKCSKESNAEL.TADCETKRLGQSLNCNANVYMRPWENMTSVIRRPPG : CYTC_HUMAN
CYTC_HUMAN       : GGPMDASVEEEGVRRALDFAVGEYNKASNDMYHSRALQVVRARKQIVAGVNYFLDVELGRTTCTKTQPNLDNCPFHDQPHLKRKAFCSFQIYAVPWQGTMTLSKSTCQ : CYTN_HUMAN
CYTN_HUMAN       : GGIYNADLNDEWVQRALHFAISEYNKATKDDYYRRPLRVLRARQQTVGGVNYFFDVEVGRTICTKSQPNLDTCAFHEQPELQKKQLCSFEIYEVPWENRRSLVKSRCQ : CYTC_RAT
CYTC_RAT         : GAPQEADASEEGVQRALDFAVSEYNKGSNDAYHSRAIQVVRARKQLVAGINYYLDVEMGRTTCTKSQTNLTNCPFHDQPHLMRKALCSFQIYSVPWKGTHTLTKSSCK : KNL2_BOVIN
KNL2_BOVIN       : VGCPKPIPVDPDLEEALNHSIAKLNAEHDGTFYFKIDTVKKATVQVVGGLKYSIVFIARETTCSKGSNEEL.TKSCEINIHGQILHCDANVYVVPWEEQTSLMKRPPG : JC2040
JC2040           : GGPMDANMNDQGTRDALQFAVVEHNKKTNDMFVRQVAKVVNAQKQVVSGMKYIFTVQMGRTPCRKGGVEKI.CSVHKDPQMAVPYKCTFEVWSIPWMSGIKMVKNQCE : CYTX_ONCVO
CYTX_ONCVO       : GGWEDRDPKDEEILELLPSILMKVNEQSNDEYHLMPIKLLKVSSQVVAGVKYKMDVQVARSQCKKSSNEKVDLTKCKKLEGHPEKVMTLEVWEKPWENRVEILGTKEV : KNL_HUMAN
KNL_HUMAN        : VGCPRDIPTNPELEETLTHTITKLNAENNATFYFKIDNVKKARVQVVAGKKYFIDFVARETTCSKESNEEL.TESCETKKLGQSLDCNAEVYVVPWEKMISLMKRPPG : CRES_MOUSE
CRES_MOUSE       : NYFGSINISNANVKQCVWFAMKEYNKESEDKYVFLVDKILHAKLQITDRMEYQIDVQISRSNCKKPLNNTENCIPQKKPELEKKMSCSFLVGALPWNGEFNLLSKECK : CYTD_HUMAN
CYTD_HUMAN       : GGIHATDLNDKSVQCALDFAISEYNKVIKDEYYSRPLQVMAAYQQIVGGVNYYFNVKFGRTTCTKSQPNLDNCPFNDQPKLKEEEFCSFQINEVPWEDKISILNYKCR : CYTO_BOVIN
CYTO_BOVIN       : GGLMEADVNEEGVQEALSFAVSEFNKRSNDAYQSRVVRVVRARKQVVSGMNYFLDVELGRTTCTKSQANLDSCPFHNQPHLKREKLCSFQVYVVPWMNTINLVKFSCQ : CYT_CYPCA
CYT_CYPCA        : GGLVDADINDKDVQKALRFAVDHYNGQSNDAFVRKVSKVIKVQQQVAAGMKYIFTVKMEVASCKKGGVKTM.CAVPKNPSIEQVIQCKITVWSQPWLNSLKVTENTCM : CYTS_RAT
CYTS_RAT         : GGIEKSSMEEEGASEALNYAVNEYNEKNSDLYLSRVVEVKDVQKQVVAGTKFFFDVILGKTICLKTQGDLTNCPLNEEADQQEHEFCSFVVHDIPWENYIVLLSSSCH : HSU62800
HSU62800         : GELRDLSPDDPQVQKAAQAAVASYNMGSNSIYYFRDTHIIKAQSQLVAGIKYFLTMEMGSTDCRKTRVDLTTCPLAAGAQ.QEKLRCDFEVLVVPWQNSSQLLKHNCV : CYT_BITAR
CYT_BITAR        : GGLSPRDVTDPDVQEAAAFAVEKYNAGSKNDYYFKERRVVEAQSQVVSGVKYYLMMELLKTTCKKTVGEIQNCNLPPENQ.QEEITCRFEVWSRPWLPSTSLTK.... : AAHNECY
AAHNECY          : GGWQERNPEEKEIQDLLPKVLIKLNQLSNVEYHLMPIKLLKVSSQVVAGLRYKMEIQVAQSECKKSSGEEVNLKTCKRLEGHPDQIITLEAWEKSWENQVKILEKKEV : JC4536
JC4536           : GGWIDANVGDTDVKEAARFATEAQSSRSNSLYHHKLLKIHKARTQVVSGINYEVFIETGTTTCKKSEVPLEDLKRCAVPENGVKHLCQAIVWVQAWIPRTKVTKLECQ : BMU80972
BMU80972         : LSRATYNEDDEEIQEVAEKAMEQVNDQTRYRNLYKLVRVISAQTQVVAGIKYYLTILAAPTTCRKGAV.GMNPMKCTIDSSKPTKQFKIEVWSAPWQNTFKVTLT... : NXL3_BUNMU

                 : 9---------19--------29--------39--------49--------59--------69--------79--------89--------99--------109----- :
OrigSeq          : GAPVPVDENDEGLQRALQFAMAEYNRASNDKYSSRVVRVISAKRQLVSGIKYILQVEIGRTTCPKSSGDLQSCEFHDEPEMAKYTTCTFVVYSIPWLNQIKLLESKCQ :OrigSeq
cons             : ----------HHHHHHHHHHHHHH--------EEHHHHHHHHHHHEHE--EEEEEEEE---------------------------EEEEEEEE------EEEEE---- :cons
dsc              : ----------HHHHHHHHHHHHHH--------HHHHHHHHHHHHHEEE---EEEEEE----------------------------EEEEEEE-------EEE------ :dsc
mul              : ------------HHHHHHHHHHH---------HHHHHHHHHHHHEEEE-EEEEEEEHH---------------------H-HHHHEEEEEEE---------E------ :mul
nnssp            : ----------HHHHHHHHHHHHHH-------EEEHHHHHHHHHHHHH---EEEEEEEE----------------------------EEEEEEE------HHHHH---- :nnssp
phd              : ----------HHHHHHHHHHHHHHH-------EEEHHHHHHHHHHE-EEEEEEEEEEE-------------------------EEEEEEEEEEE----EEEEEE---- :phd
pred             : ----------HHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHH-EEEEEEEE------------------------------EEEEE--------------- :pred
zpred            : ---------HHHHHHHHHHHHHHHH------EHHHHHHHHHHHEEEEEEEEEEEEEHHHH----------------HHHHHHH--HEEEEEE---------------- :zpred


access           : EE-EEBEEEEEEBEEBBEBBBBEB-EEBEEEBBBEBBEBBEB-EEBBBBBEBBBBBEBBEEEBEEE-EEEBEBEB-EEEEEEEEBBBEBEBBBBBBEEBBEBBEEEEE : access

PHD Rel          : 998789999157899999999998436886411221466665554111348899997435423246787688877888667730236899997352211346442599 : PHD Rel
Pred Rel         : 008888990767889999999865677796655677777788777776665586666667867999999787788999767788566556667789987676778000 : Predator Rel


dssp             : ---EE-----HHHHHHHHHH-HHHH------EEEEEEEEEEEEEEE---EEEEEEEEEEEEEEE-----HHHHHHHH------EEEEEEEEEEE----EEEEEEEEE- :dssp
define           : -EEEEEE--HHHHHHHHHHHHHHHHHHH--EEEEE----EEEE-----EEEEEEEEEEEEEE-------HHHHHHHHH----EEEEEEEEEEEE----EEEEEEEEEE :define
stride           : ---EE-----HHHHHHHHHHHHHHHHH----EEEEEEEEEEEEEEE---EEEEEEEEEEEEEEE----HHHHHHHHH-----EEEEEEEEEEEE----EEEEEEEEE- :stride


Q3 values for 1cewi-1-DOMAK  View SS in Rasmol

	dssp	define	stride
phd	69.44	61.11	66.67
dsc	56.48	46.30	53.70
pred	51.85	43.52	49.07
mul	50.93	40.74	49.07
nnssp	58.33	49.07	55.56
zpred	50.93	45.37	49.07
cons	62.96	52.78	60.19