Results for 1cfr-1-GJB


1cfr-1-GJB    : MDIISKSGEGNKYTINSAIAFVAYASHIDINTTEFSKVLSGLRDFINDEAIRLGGKISDGSFNKCNGDWYEWLIGIRAIEFFLESETNFIVVKMPNATSFDVMSIYKSCLSEFIYDLRSKLSLNNVNLITSNPDFSIIDIRGRREELKSMLKDISFSNISLSTISEIDNLYKNFIDYAELEHIKSFLSVKTTFRPDRRLQLAHEGSLMKALYTHLQTRTWTINPTGIRYYAAATSIGNADVIGLKTVATHSITDVKSLPQSAVDEIFKINSVLDVDSCLSHIL : T2CX_CITFR
T2CX_CITFR    : MDIISKSGEGNKYTINSAIAFVAYASHIDINTTEFSKVLSGLRDFINDEAIRLGGKISDGSFNKCNGDWYEWLIGIRAIEFFLESETNFIVVKMPNATSFDVMSIYKSCLSEFIYDLRSKLSLNNVNLITSNPDFSIIDIRGRREELKSMLKDISFSNISLSTISEIDNLYKNFIDYAELEHIKSFLSVKTTFRPDRRLQLAHEGSLMKALYTHLQTRTWTINPTGIRYYAAATSIGNADVIGLKTVATHSITDVKSLPQSAVDEIFKINSVLDVDSCLSHIL : S26180

              : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------201-------211-------221-------231-------241-------251-------261-------271-------281 :
OrigSeq       : MDIISKSGEGNKYTINSAIAFVAYASHIDINTTEFSKVLSGLRDFINDEAIRLGGKISDGSFNKCNGDWYEWLIGIRAIEFFLESETNFIVVKMPNATSFDVMSIYKSCLSEFIYDLRSKLSLNNVNLITSNPDFSIIDIRGRREELKSMLKDISFSNISLSTISEIDNLYKNFIDYAELEHIKSFLSVKTTFRPDRRLQLAHEGSLMKALYTHLQTRTWTINPTGIRYYAAATSIGNADVIGLKTVATHSITDVKSLPQSAVDEIFKINSVLDVDSCLSHIL :OrigSeq
cons          : --EE--------EEEEHHHHHHHH----------HHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHH---EEEEEE-----EHHHHHHHHHHHHHHHHHHHH-----EEEEE-----EEEE---HHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHEEEEEE----HHHHHHHHHHHHHHHHHHHH---EEEE-----EEEEE-------EEEEEEEEEEEE--------HHHHHHHHHH--EE---------- :cons
dsc           : ------------EEE----EEEEE----------HHHHH--HHHHHHHHHHHH-----------------HHHHHHHHHHHHH-----EEEEE------EEEEE------HHHHH-----------EEE------EEEE----HHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHEEEE-----HHHHHHHHHHHHHHHHHH----EEEEEE-----EEEEE--------EEEEEEE--------------HHHHHHEE-------------- :dsc
mul           : HHEEE--------E-EEE--HHHHHH---------------HHHHH----HHH------------------H-----HHHHHHH----EEEEE--------EEEE---EE-HHHHH---------EEEE-----EEEEEE---HHHHHHHHHHH--------EEEEE-------E--HHHHHHHHHHEE---------HHHHHH--HHHHHHHHHH-----------EEEEE--------EEEEEHEEEEEEE-------HHHHHHHHH--E----------- :mul
nnssp         : --EE---------EEEHHHHHHHH--------HHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHH-----EEEEE------HHHHHHHHHHHHHHHHHHHHH-----EEEEE-----EEEEE---HHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHEEEEEE------HHHHH----HHHHHHHHHH---EEE-----EE-----------EE-----------------HHHHHHHHH---EE---HHHHHHH :nnssp
phd           : --EEEE------EEHHHHHHHHHHHHHE-------HHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHH--EEEEEEE------HHHHHHHHHHHHHHHHHHHH-----EEEEE----EEEEE---HHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHH-EEEEE----HHHHHHHHHHHHHHHHHHHH---EEEE-----EEEEHHHH----EEEEEEEEEEEEE-------HHHHHHHHHH--EEE--------- :phd
pred          : -----------EEEEEHHHHHHHH-----------HHHHHHH-------EEEEEEEE------------HHHHHHHHHHHHHHHH---EEEEEE-----EEEEEHHHHHHHHHHHHHHHHH----EEEEE-----EEEEEHHHHHHHHHHHHH------EEEEEEHHHHHHHHHHHHHHHHHHHHHEEEEE-----HHHHHHH--HHHHHHHHHHHHEEEEEE--EEEEEEE-----EEEEEEEEEEEEEE-EEEEE--HHHHHHHHH--------------- :pred
zpred         : HHEEE-------EEEEEEEEHHHHHHH-EEE--HHHEE----EEEEHHHHHHH----------------HEHEH--HHHHHHHHHHHHHHEEEE--HHHHHEEEEH--EEEEEHHHHH-----EEEEEEE----EEEEE---HHHHHHHHHHHHEEE-----EEEEEH-----EEHHHHHHHHHHHHE---------HHHHHHHHHHHHHHHHEEEE---------EEEEEEEEEE--EEEEEEEHEEEEEEEEEE----HHHHHHHHHHEEE-HHHHHHHEE :zpred


access        : EEBBBEBEEE-E-BBEBBBBBBBBBBBBEBEBEEBBEBBBEB-EBBEEEBBEBBBEBBEEBBEEBEEEBBEBBBBBEBBEBBBEBEB-BBBBEBEEBBBBEBBBBBEBBBBEBBBEB-BEBBBEBBEBBBE-EEBBBBEBEE-EEEBEEBBEEBBBBBBBBBBBBEBEEBBEEBBEBBEBEBBEBBBBBEBBB-EEEEBEBBEEEBBBEBBBEBBEE-EBEBEBEBBEBBBBBBBBB-BEBBBBEBBBBBBBEEBEEBEEEBBEEBBEBBBBBEBEBBBBEBB : access

PHD Rel       : 9647426989822235799999986320146222115677689875999999678621166764672599999988999999986272999983697741112357774699999988741147514665599837775351479999999852631333234337999999988899999965222775144845547656478899999997413256857876323311453499502566642466741336361379999953131445242120449 : PHD Rel
Pred Rel      : 0056889099078855677007785060687855685780686577786875656088879888909965587004079007977906500007999876707767898557879998856697876698990006099687669909999650078870766555078877668589989958586666668000069099000099099998960000770000800066886678799006978906685566777568885565665700888996000 : Predator Rel


dssp          : ---EEE-----EEEE-HHHHHHHHHH--------HHHHHHHHHHHHHHHHHHH--E--HHHHHHHHHHHHHHHHHHHHHHHHHH----EEEEE--------HHHHE-HHHHHHHHHHHHHHHH-----------EEEEE----HHHHHHH----------HHHHHHHHHHHHHH---E----EEEEEEE-----HHHHHHHHHHHHHHHHHHHHHHHH---------EEEEEE----HHHHHHH--E-HHHH--------E---EEEE---HHHHHHHHHHH- :dssp
define        : -----------EEEEEHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH--EEEEEEEEE----------HHHHHHHHHHHHHHHHHHEEEEEEEEEE-EEEE---HHHHHHHHHH-------HHHHHHHHHHHHHHHH---------EEEEE----HHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEE---EEEEHHHHH-----HHHHHHH----------EEEEEEHHHHHHHHHHHHH :define
stride        : ---EEE-----EEEE-HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHH--E--HHHHHHHHHHHHHHHHHHHHHHHHHH----EEEEE---HHH--HHHHE-HHHHHHHHHHHHHHHHH----------EEEEE---HHHHHHHHH---------HHHHHHHH-HHHH----E----EEEEEEEE----HHHHHHHHHHHHHHHHHHHHHHHHH--------EEEEEE----HHHHHHHH-E-HHHH--------E---EEEE---HHHHHHHHHHH- :stride


Q3 values for 1cfr-1-GJB  View SS in Rasmol

	dssp	define	stride
phd	65.37	58.66	64.66
dsc	60.42	51.94	57.60
pred	54.77	54.42	53.36
mul	51.94	39.58	50.18
nnssp	63.25	57.60	60.42
zpred	44.52	40.99	46.29
cons	65.72	59.01	64.31