Results for 1cgu-2-GJB


1cgu-2-GJB    : NPAIAYGSTQQRWINNDVYVYERKFGKSVAVVAVNRNLSTSASITGLSTSLPTGSYTDVLGGVLNGNNITSTNGSINNFTLAAGATAVWQYTTAET : CDG2_BACMA
CDG2_BACMA    : NPALAYGSTTQRWVNSDVYVYERKFGSNVALVAVNRSSTTAYPISGALTALPNGTYTDVLGGLLNGNSITVNGGTVSNFTLAAGGTAVWQYTTTES : CDGT_BACSP
CDGT_BACSP    : NPAIAYGTTQERWINNDVLIYERKFGNNVAVIAVNRNVNTSASITGLVTSLPAGSYTDVLGGLLNGNNLTVSGGSASIFTLAAGGTAVWQYTTAVT : CDGT_BACLI
CDGT_BACLI    : NPAIAYGSTQQRWINNDVYIYERKFGKSVAVVAVNRNLTTPTSITNLNTSLPSGTYTDVLGGVLNGNNITSSGGNISSFTLAAGATAVWQYTASET : CDGT_BACS2
CDGT_BACS2    : NSALGYGTTTERWLNEDIYIYERTFGNSIVLTAVN.SSNSNQTITNLNTSLPQGNYTDELQQRLDGNTITVANGAVNSFQLRANSVAVWQVSNPST : CDGT_BACOH
CDGT_BACOH    : NPALGYGNTSERWINSDVYIYERSFGDSVVLTAVN.SGDTSYTINNLNTSLPQGQYTDELQQLLDGNEITVSNGAVDSFQLSANGVSVWQITEEHA : AMY_BACCI
AMY_BACCI     : NPAIAYGTTQQRWINNDVYIYERKFGNNVAVVAINKNLTSSYSIAGLNTSLPSGTYTDVLANSLSGNSITVSSGAVNTFTLQAGGEASG....... : AMY_THETU
AMY_THETU     : NPAIAYGTTQQRWINNDVYIYERKFGNNVALVAINRNLSTSYNITGLYTALPAGTYTDVLGGLLNGNSISVSDGSVTPFTLSAGEVAVWQYVSSSN : A18991
A18991        : NRAIAYGDTTERWINEDVFIYERSFNGEYALIAVNRSLNHSYQISSLVTDMPSQLYEDELSGLLDGQSITVQNGSIQPFLLAPGEVSVWQYSNQNV : AMYM_BACST
AMYM_BACST    : NAAIQYGTTTQRWINNDVYIYERKFFNDVVLVAINRNTQSSYSISGLQTALPNGSYADYLSGLLGGNGISVSNGSVASFTLAPGAVSVWQYSTSAS : CDGT_BACST
CDGT_BACST    : NPALAYGDTEQRWINGDVYVYERQFGKDVVLVAVNRSSSSNYSITGLFTALPAGTYTDQLGGLLDGNTIQVSNGSVNAFDLGPGEVGVWAYSATES : CELF12F32

              : 401-------411-------421-------431-------441-------451-------461-------471-------481-------491--- :
OrigSeq       : NPAIAYGSTQQRWINNDVYVYERKFGKSVAVVAVNRNLSTSASITGLSTSLPTGSYTDVLGGVLNGNNITSTNGSINNFTLAAGATAVWQYTTAET :OrigSeq
cons          : --EE------EEEE---EEEEEE-----EEEEEEE------EEEEE-EE-------HHHHHH-----EEEEE---EEEEEE----EEEEEEE---- :cons
dsc           : ----------EEEE--EEEEEE------EEEEEEE-----EEEEEEEEEEE---EEEEEEEEEE---EEEEE---EEEEEEE---EEEEEEE---- :dsc
mul           : -----------------EEEE-------EEEEEE---------------------------H------E---------EE-------EEEE----- :mul
nnssp         : --EE--------EE---EEEEE------EEEEEE-------EEE------------------------EEE----EEEEEE----EEEEEE----- :nnssp
phd           : --EEEE---EEEEE---EEEEEEE---EEEEEEEE------EEEEE-EE-------HHHHHH-----EEEEE-----EEEE----EEEEEEEEE-- :phd
pred          : ----------EEE----EEEEEE-----EEEEEE----------------------------------EEE-----EEEEE----EEEEE------ :pred
zpred         : -EEEEEE--EEEE----EEEEEE-----EEEEEEE------EEEEEEEE-----EEEEEEEE-----EEEEE----EEEE------EEEE------ :zpred


access        : EEBBBEB-EEE-BBEBEBBBBE-EBEEEBBBBBBBEEBEEBBBBBBBBBBBEEEE-BEBBBBBBEEEEBBBBEEBBBBBBBBBEEBBBBBBBEEEE : access

PHD Rel       : 934885753137514656899980274599999954789805855311127884411476740489848991795423585158159999775349 : PHD Rel
Pred Rel      : 007777877565568968980857799609900069979977766676678990975765666899970008799777666806769906666000 : Predator Rel


dssp          : -HHHHH-EEEEEEEE--EEEEEEEE--EEEEEEEE------EEE---E-----EEE------------EEEE--EE--EEE----EEEEEE----- :dssp
define        : HHHHHEEEEEE------EEEEEEE----EEEEEE-----EEEEEEEEEEE---EEEEE------EEEEE----EEEEE------EEEEEE--EEEE :define
stride        : -HHHHH-EEEEEEEE--EEEEEEEE--EEEEEEEE------EEE--EE-----EEE------------EEEE--EE--EEE----EEEEEE----- :stride


Q3 values for 1cgu-2-GJB  View SS in Rasmol

	dssp	define	stride
phd	70.83	54.17	69.79
dsc	62.50	53.12	63.54
pred	71.88	52.08	70.83
mul	63.54	47.92	62.50
nnssp	75.00	53.12	73.96
zpred	66.67	62.50	67.71
cons	69.79	52.08	68.75