Results for 1cgu-3-GJB


1cgu-3-GJB    : TPTIGHVGPVMGKPGNVVTIDGRGFGSTKGTVYFGTTAVTGAAITSWEDTQIKVTIPSVAAGNYAVKVAASGVNSNAYNNFTIL : CDGT_BACSP
CDGT_BACSP    : APTIGHVGPMMAKPGAAVTIDGRGFGATKGTVYFGTTAVTGANITAWEDTQIKVKIPAVAGGVYNIKIASAGTSSNVHDNFEVL : CDGT_BACLI
CDGT_BACLI    : TPTIGHVGPVMGKPGNVVTIDGRGFGSAKGTVYFGTTAVTGSAITSWEDTQIKVTIPPVAGGDYAVKVAANGVNSNAYNDFTIL : CDGT_BACS0
CDGT_BACS0    : TPIIGNVGPMMAKPGVTITIDGRGFGSGKGTVYFGTTAVTGADIVAWEDTQIQVKIPAVPGGIYDIRVAAAGAASNIYDNFEVL : A40633
A40633        : APTIGVSGPINVTSGQVVNVDAQASDLDNDPLTYSWVAAPGLALSANNTAAVAVTAPSVAQQSYDLTVTNDGALSTTKTIVVVV : CDGT_BACS2
CDGT_BACS2    : SPLIGQVGPMMGKAGNTITVSGEGFGDERGSVLFDSTSSE...IISWSNTKISVKVPNVAGGYYDLSVVAANIKSPTYKEFEVL : CDG1_BACMA
CDG1_BACMA    : SPAIGNVGPTMGQPGNIVTIDGRGFGGTAGTVYFGTTAVTGSGIVSWEDTQIKAVIPKVAAGKTGVSVKSSGTASNTFKSFNVL : CDGT_BACOH
CDGT_BACOH    : SPLIGHVGPMMGKHGNTVTITGEGFGDNEGSVLFDSDFSD...VLSWSDTKIEVSVPDVTAGHYDISVVAGDSQSPTYDKFEVL : CDG2_BACMA
CDG2_BACMA    : SPIIGNVGPTMGKPGNTITIDGRGFGTTKNKVTFGTTAVTGANIVSWEDTEIKVKVPNVAAGNTAVTVTAAGTTSAAFNNFNVL : AMY_THETU
AMY_THETU     : SPLIGHVGPTMTKAGQTITIDGRGFGTTSGQVLFGSTAGT...IVSWDDTEVKVKVPSVTPGKYNISLKSSGATSNTYNNINIL : CDGT_BACST
CDGT_BACST    : TPIIGHVGPMMGQVGHQVTIDGEGFGTNTGTVKFGTTAAN...VVSWSNNQIVVAVPNVSPGKYNITVQSSGQTSAAYDNFEVL : AMYM_BACST
AMYM_BACST    : APQIGSVAPNMGIPGNVVTIDGKGFGTTQGTVTFGGVTAT...VKSWTSNRIEVYVPNMAAGLTDVKVTG.GVSSNLYS.YNIL : A18991
A18991        : APEIGQIGPPIGKPGDEVRIDGSGFGSSTGDVSFAGSTMN...VLSWNDDTIIAELPEHNGGKNSVTVTNSGESSNGYP.FELL : S24600

              : 497-------507-------517-------527-------537-------547-------557-------567-------577- :
OrigSeq       : TPTIGHVGPVMGKPGNVVTIDGRGFGSTKGTVYFGTTAVTGAAITSWEDTQIKVTIPSVAAGNYAVKVAASGVNSNAYNNFTIL :OrigSeq
cons          : ------E---------EEEEE--------EEEEEEEEEE---EEEEE---EEEEEEE------EEEEEEE----------EEE- :cons
dsc           : ------EEEEE-----EEEEEEE----EEEEEEEEEEE----EEEE----EEEEEEE------EEEEEEE----------EEE- :dsc
mul           : ---E------------EEEE-----------EEEE---E----E-------EEEEE--------EEEE-------------EEE :mul
nnssp         : ----------------EEEEE---------EEEEEEE------EEEE---EEEEEE------EEEEEEEE----------EEEE :nnssp
phd           : --EEEEE--------EEEEEE--------EEEEEEEEEE---EEEEEE-EEEEEEEE------EEEEEEE--------EEEEE- :phd
pred          : ----------------EEEEE----------EEE----EEE-EEEE----EEEEEE--------EEEEE--------------- :pred
zpred         : EEEEEEEEEEE----EEEEEEE--------EEEEEE--------E-HHH--EEEEEEE-----EEEEEEE----------EEEE :zpred


access        : EEBBB-BBEBBBEEEBBBBBEBEBBEE-EBBBBBBBBBBEBBBBBBBEEBEBEBEBBEBBBEE-BBBBBBEEBBBEB-EBBEBB : access

PHD Rel       : 937767515545678289996121357641699998631674699861416999885377671589997337654431244539 : PHD Rel
Pred Rel      : 008800899999999700098889998997799878677776777667765990068998998769097799999989887000 : Predator Rel


dssp          : --EEEEEE--EE----EEEEEEE-------EEEE--EEE----EEEEE--EEEEE------EEEEEEEEE--EEEEEEEEEEE- :dssp
define        : EEEE-EEEE------EEEEEEEE------EEEE--EEEEE----------EEEEEEEE---EEEEEEEE--EEEEEEEEEEEE- :define
stride        : --EEEEEE--EE---EEEEEEEE-------EEEE--EEEEHHHEEEEE--EEEEEE-----EEEEEEEEE--EEEEEEEEEEE- :stride


Q3 values for 1cgu-3-GJB  View SS in Rasmol

	dssp	define	stride
phd	75.00	66.67	73.81
dsc	66.67	63.10	63.10
pred	59.52	53.57	59.52
mul	58.33	54.76	53.57
nnssp	69.05	58.33	64.29
zpred	61.90	65.48	59.52
cons	69.05	63.10	65.48