Results for 1ctm-2-DOMAK


1ctm-2-DOMAK    : VYNATAGGIISKILRKEKGGYEITIVDASNERQVIDIIPRGLELLVSEGESIKLDQPLTS : CYF_PINTH
CYF_PINTH       : VYSASATGRVSKILRKEKGGYEITIDNTSDGGQVVDIVPPGPELLISEGELIKVDQPLTN : CRPETA
CRPETA          : IYNASAAGKIVAITALSEKGFEVSIEKANGE.VVVDKIPAGPDLIVKEGQTVQADQPLTN : CYF_CYAPA
CYF_CYAPA       : IYNASVNGRISEITKLENGGYEITITTKNGE.SKIETIPAGPSLVVKKGQTIKADQPLTI : PLPETAGCG1
PLPETAGCG1      : VYNASAAGVITAIAKAED.SARVKIRTEDGT.TIVDKIPAGPELIVSEGEEVAAGAALTN : CYF_NOSSP
CYF_NOSSP       : LYNASATGTIAKIAKEEDEKYQVNIQPESGD.VVVDTVPAGPELIVSEGQAVKAGDALTN : CYF_SYNP2
CYF_SYNP2       : QFKASATGTITNIAVNEAA.TDITISTEAG..EVIDTIPAGPEVIVSEGQAIAAGEALTN : CYF_SYNY3
CYF_SYNY3       : AFKAPNAGTISEVNALEAG.YQLILTTADG..TETVDIPAGPELIVSAGQTVEAGEFLTN : CYF_ODOSI
CYF_ODOSI       : SFGAVQAGQISEITTSEKGESNITIINSDGV.KTSQIIPAGLTLTVKQGDSVKVDQSLNI : CYF_PORPU
CYF_PORPU       : LISASASGKINKIEALEKG.FIVHITSTKDS.EVNQSIPAGVELKVREGETIQLDQAISK : YGG8_YEAST

                : 170-------180-------190-------200-------210-------220------- :
OrigSeq         : VYNATAGGIISKILRKEKGGYEITIVDASNERQVIDIIPRGLELLVSEGESIKLDQPLTS :OrigSeq
cons            : --------EEEHHHH-----EEEEEE------EEEEE-----EEEEE---EEEE------ :cons
dsc             : --------EEEHHHHHH---EEEEEEE-----EEEEE-----EEEEE----EEE------ :dsc
mul             : ---------EEHHHHH-----EEEEE-------EEEE-----EEEE------H------- :mul
nnssp           : EEE------HHHHHH------EEEEE-------EEEE------EEE----EEE------H :nnssp
phd             : --------EEEEEEE-----EEEEEE-----EEEEEEE----EEEEE---EEEE------ :phd
pred            : ---------HHHHHHHH----EEEEE------EEEEE-----EEEEE------------- :pred
zpred           : EEEHHHHHHEEEHHHHH---HHEEEE-------EEEEE---HEEEHHHHHHHHHHHHHE- :zpred

access          : E-EBBBEBEBBEBBEEEEEEBEBBBBEEEEEEEBBBBBEEBBEBBBEEEEBBEBEEEBEE : access

PHD Rel         : 954332871664773157881799984898728888527898699816871442246789 : PHD Rel
Pred Rel        : 009887966757778807897880008899976887889099598968976557999000 : Predator Rel

dssp            : --E----EEEEEEEE-----EEEEEEE----EEEEEEE-----E------EE----E-E- :dssp
define          : EEEE-------EEEE-----EEEEEE----EEEEEEEE---EEEE--------------- :define
stride          : --EE---EEEEEEEE-----EEEEEEEHHH-EEEEEEE-----E-----EEE---EE-E- :stride

Q3 values for 1ctm-2-DOMAK  View SS in Rasmol

	dssp	define	stride
phd	81.67	75.00	71.67
dsc	68.33	61.67	58.33
pred	61.67	68.33	51.67
mul	65.00	68.33	55.00
nnssp	65.00	68.33	55.00
zpred	43.33	45.00	38.33
cons	71.67	65.00	61.67