Results for 1cyx-1-AUTO.1


1cyx-1-AUTO.1    : KPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMHSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGICAEICGPGHSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFM : BACCCOS2
BACCCOS2         : DTVVVNVRANLYWWEFEYPDYGIITSQDLVVPTNEKVYFNLVASDVKHSFWIPAVGGKIDTNTDNKNQFWLVFDQKGVFYGKCAELCGPSHALMDFKVRPLPR.AEFDAWVEKMQKAEPVVTDPVAKQGEEIFNK.RTAPNLAGFADRERIAGILEHN : CYOA_ECOLI
CYOA_ECOLI       : KPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFM : COX2_SYNY3
COX2_SYNY3       : ..LMVDVKGIQYAWIFTYPETGIISG.ELHAPIDRPVQLNMEAGDVIHAFWIPQLRLKQDVIPGRGSTLVFNASTPGQYPVICAELCGAYHGGMKSVFYAHTP.EEYDDWVAANA...PAPTESMAMT.........LPKATTAMTPNEYLAPYAK.. : E69687
E69687           : EPLVVYATSVDWKWVFSYPEQDIETVNYLNIPVDRPILCKISSADSMASLWIPQLGGQKYAMAGMLMDQYLQADKVGTYEGRNANFTGEHFADQEFDVNAVTE.KDFNSWVKKTQNEAKLTKEKYDELMLP.....ENVDELTFSSTHLKYVDHGQDA : A54759
A54759           : RPLPVQVVAMDWKWLFIYPEQGIASVNEMAVPVDRPVEFTLTSTSVMNAFYIPAMAGMIYAMPGMETKLNGVFNHPGEYKGIASHYSGHGFSGMHFKAHATDE.AGFDAWIEKARAS.GGTLDRPRYLELEAPSENVPPMSFAEVDPHLFQRIVNMCV : QOX2_ACEAC
QOX2_ACEAC       : KPLHVEVVALDWKWLFIYPEQGIATVNQLAIPVNTPIDFNITSDSVMNSFFIPRLGSMIYAMAGMQTQLHLLASEPGDYLGESANYSGRGFSDMKFHTLAVSG.DEFNAWVEKVKSS.SEQLDSQTYPKLAAPSE.NPVEYFAHVEPGMFNTIVAKYN : TFCYC13
TFCYC13          : .PLVIDVTAQQWKWTFSYPKQGVTDVSQLVVPEGRTIYFVLRTKDVMHDFWVPAWGEKKDVIPNEVRHLFITPTMLPMLRVQCSLICGNGHPLMRAPVKVVTP.ADFKAWVANNS........................................... : ASCOXABC
ASCOXABC         : ..LVVNVTGLQYAWIFTYPESGITTG.ELHVPIGREVQINMTANDVIHAFWVPEFRLKQDAIPGRQTEMRFTPKTAGDYTLICAELCGPYHGAMRTQVVVEPE.EAFKKWTQEQL...AANSDTLNQA.........VAVNPTDLTPEEFLAPYTK.. : A23711
A23711           : .AMKVEVTGYQFWWDFHYPELGLRNSNELVLPAGVPVELEITSKDVIHSFWVPGLAGKRDAIPGQTTRISFEPKEPGLYYGFCAELCGASHARMLFRVVVLPK.EEFDRFVEAAKASPPVADERGQQVFQQNCAACARSMPPAVIGPELLGAGIVENT : COX2_BACFI
COX2_BACFI       : NTVYIKVTGHQFWWQFDYENEGFTAGQDVYIPVGEKVIFELHAQDVLHSFWVPALGGKIDTVPGITNHMWLEADEPGVFKGKCAELCGPSHALMDFKLIALER.DEYDAWVEGMS.AEEEPTETLANQGRQVFEENAAGPAFTNFGEREVIAGYLENN : BACCCOSII
BACCCOSII        : DVLVVDVTAHLYWWEFEYPGYGVVTSQDLVVPTDERIYFNLIASDVKHSFWVPSAGGKLDTNTDNVNSFWLSFDSKNLFYGKCAELCGPSHALMDFKVQTVSR.AEFDQWIEKMQNVETPTTD.LAQAGEEIFAQ.SIAPNLANFGDRSRIAGILEHT : MTCY49311

                 : 125-------135-------145-------155-------165-------175-------185-------195-------205-------215-------225-------235-------245-------255-------265-------275----- :
OrigSeq          : KPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMHSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGICAEICGPGHSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFM :OrigSeq
cons             : --EEEEEE---EEEEEE-----EEE--EEEE-----EEEEE-------EEEE------EE-------EEEEE----------E-----------EEEEEE----HHHHHHHHHHHH------HHHHHHHHH---------------------HH---- :cons
dsc              : ---EEEEE---EEEEEE----------EEE------EEEEE-------EEEE------EEE-----EEEEEE------EEEEEEEE------EEEEEEEE----HHHHHHEEE---------HHHHHHHH---------EEEE---------HH---- :dsc
mul              : --EEEEEE------EE------------EE------EEEEE-----H-------------H------HHHE----------EEH---------HHHHHHH----HHHHHHHHHH----------------------------------HHHHHH---- :mul
nnssp            : --EEEEEE-----EEE---------------------EEEE--------------------------EEEEE-------------------------------HHHHHHHHHHHHH------HHHHHHHH------------------HHHHHHHHH- :nnssp
phd              : --EEEEEE-EEEEEEEEE----EEEE-EEEE----EEEEEEE-----EEEEE------EE-------EEEEEE---------E-----------EEEEEE----HHHHHHHHHHHH------HHHHHHHHH--------------------------- :phd
pred             : ---EEEEE---EEEEEE-----EEE---EEE-----EEEEE-------EEE---------------------------------------------EEEE----HHHHHHHHHHH------HHHHHHHHHH-----------------HHHHHHH--- :pred
zpred            : -EEEEEEEHHH-EEE--------EEEEEEEEEE--EEEEEHHHHHHEEEEEEH-----EEEEE----EEEE--------EEEEEEEE---HHHHHHHHHH----HHHHHHHHH----------HHHHH--------------------HHHH------ :zpred


access           : EEBBBEBBBBEBBBBBB-EEEBBBBBBEBBBEBE-EBBBEBBBEEBBBBBBBBEBBEEBBBBBE--B-BBBBBEEEE-BEBBBBEBBBEB-BBBEBEBBBBEEEEEBEEBBEEBEEEEE-BEEEBBEBEBEBBEEBBBBEBBBEB-EEBBBBBBBEEE : access

PHD Rel          : 95799883112544552055432421302323874279987325431237652467531211465421565544788621211111435443321567511653258999999841778753225554432344344555435679743331123479 : PHD Rel
Pred Rel         : 00755585556755550799987767777787998656996577765556688888775667797755577678999977755506899988876667776976678799999788999677878988885899997766668896976576666000 : Predator Rel


dssp             : --EEEEEEEE--EEEEEE----EEEE-EEEEE----EEEEEEE----EEEEEHHH-EEEEE-----EEEEE-----EEEEEEE------------EEEEEE--HHHHHHHHHHHH-----E--HHHHHHHH--------EEE--E---HHHHHH---- :dssp
define           : EEEEEEEEEE--EEEEEE----------------EEEEEEEE---EEEEEEE------------EEEEEEEEEE--EEEEEE--EEEE-------EEEEEEEHHHHHHHHHHHHHHHEEEE-HHHHHHHHHEEEEEEEEEEEE----HHHHHHHHH-- :define
stride           : --EEEEEEEE--EEEEEE----EEEE-EEEEE--EEEEEEEEE----EEEEEHHH-EEEEE-----EEEEEEE---EEEEEEE------------EEEEEE--HHHHHHHHHHHHH---EE--HHHHHHHH--------EEE-EE---HHHHHHHHH- :stride


Q3 values for 1cyx-1-AUTO.1  View SS in Rasmol

	dssp	define	stride
phd	76.58	59.49	75.32
dsc	72.15	60.13	67.09
pred	72.78	58.23	67.72
mul	60.76	47.47	54.43
nnssp	64.56	61.39	64.56
zpred	64.56	46.20	59.49
cons	76.58	58.23	72.78