Results for 1dfji-1-AUTO.1


1dfji-1-AUTO.1    : MNLDIHCEQLSDARWTELLPLLQQYEVVRLDDCGLTEEHCKDIGSALRANPSLTELCLRTNELGDAGVHLVLQGLQSPTCKIQKLSLQNCSLTEAGCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLEKLQLEYCRLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENCGLTPANCKDLCGIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASGCRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQHVSLMLTQNKHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLASLLLANRSLRELDLSNNCVGDPGVLQLLGSLEQPGCALEQLVLYDTYWTEEVEDRLQALEGSKPGLRVIS : RGP1_MOUSE
RGP1_MOUSE        : EDIAKLAETLAKTQVAGGQLKGKGLKLNTEDAKDVIKEIEELEALRLEGNEARVKKSELKRCHWSDMFTGRLRSEIPPASLGEGLITVELDLSDNADGVGFEALLKSPACLQELKLNNCGMGIGGKILAAALTESSAQGKPLRLVFVALENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDN.TFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEEGMAKVLASLSDDEGEDEDEEEEDEEDEEDEEDDDEEEEEQERGSGEEPTPSRKILDPNSGEPAPVLSTPTDLSTFLSFPPEKLLRLGPVSVLIVQQTDEKVVSAFLKVASVFDDAVLDAIDALMFSSFNSNTFLLLIHMGLLKSEDKIKAIPALAPLNGALE : CEF28C13
CEF28C13          : AATSVRKKTCQDANSSGEDPRIRQCSHARADMDLITGYHEADSQRVIDSSEILTEACQRRQCAPSAAVEKQIGYFHSPDTRQELLSLQMEALEEIFCAILGEMIEFYDSCVRLNLSFNKQIDMGWTTIFRSIR.HAVSLQMLNLRYTNLNDRSIPALCKMARAQPSLTCLHLENTQMSGKNLLVLICALKNNTGLRELYLGDN.GLQPTDGSHIYQLITSNSSLQLLDLRNNSIGDSGVRHICDGLAVEKSSLSAMVLWNNNVTGASMDSLAEALIENTKIETLNIGNNNLGVEGIARLKPALAS.NSHLHRLGLQNCEIILAECIADNIALLRNAGLLALHMKMNTITLLNIDASCVKLSEKDEFERYFREIYCDRNKDDVLKRLTVTFDDDSGVEKKDGNECEGDNGVSSNESKLEKPKERHQRFVLTCTETVHDIHDRLREMSGSNPGMKTIK : SLY12529
SLY12529          : GSLNLSNRSLRDVP.IEVYKDGAPEGENWWETVDLQKLILAEVLKEDLKNPLLTSHNKLTQLPAAIGELPSLKSLDSFNTNIPAEIGSATSLVKMDCSNLKELPSSLGQCAELKASNNLIGSLDDLAYCTKLLKEGNKLTTLLDVVGSSMLSELNASKNLLTGLPIGTLVRLIRLDLHQNRIKSIPSSIKGCSSLVEFFIGSNLLLPSELGELSQLSVLDRSQLTEYPAEACKLRL.SVLDLSNNSGLPAEIGLMTSLRKLVLIGNPMRTIRSTLVTGPTAALLKYLRGRLPAEEAQVMTPSKDNMVAMASRLSITTKELVGMGLIAVPPEVCENTKVDLSKIQELPVTLACSSLEVLILSKIKDWPELKSLPTCLRLDNNPLNKVPLNGFDPRLQILDLSG.CVSDNSLQHLVELYLVPILMLRKLQDLSQNSLHSIPQGFQNLTLLEPSLRSIR : CEK07G5
CEK07G5           : EELVIHLDDGVHKKKINIKCIHPAVHLARQLLSAVKHYFPDYLQSSIDVNPALYPTASPRPCHSFRRTYAALCDFYQPYEVSWDVEKTANKLRDLKLPKLLPIVGVLQYSFTGLICDAVRVSSVIDVVLSVIR.KSQNLKKLQLRSCSLPKDFITLLASAFHNNQCLEYLDLSRNPIDDKKGFTILSSVLPRLNQLKYVNFSECQLSDKSINLLCTGLYNMTQLTELILSANPMKDSGIINLVSISDFSDTGIHLDKLWNGLQIEKLILNGCSLSKKSEGVQYFSMAVNLSHTSMLKAVLLGLAS.NQQLQPFRLDTCEVLDACIGGIRCETLSNQGVLQSLLRRLDIGGSNMNQLKKNNKVINKVLLYSEEGLEELNLSDCGAYLSVLINTTTLKSLDISGNEMGNFGFVDLATSIKFPLSQIQNCLNRTALGADEAEGVLQKMEQMEGGARLAE : ACU89688
ACU89688          : GGSTIMAKPVTEAEQQSVASLGQRKDELQWVAELVKKKAEEYFFSLVKGAAKLLELKEIKSTDSTTLVELVFKTFSVPLCAADDLITIRQSYEDVFCKLVTPESRLRDVEAQATLAKNCGGFSTYQALCDFYGIPANHVKKFNMEFEQVTPNELKALVDTLHFNNYFIGFVARDYRLDKDSMKVLTDMIGVNTKMEELVLSRVEGTASAFEELGQAIAKNNSALTSIDWSNNLIKDAGVAALAAAVASMGHGLTSISLKGGDATKKGTVALCTAFKKNVEMSVLNLAGNRLDVSGLEMLLPAVMRGCTELEKFNISSCGVIKAIIGNNFITDFQNAGLAAEILTDNDFGDIIADGLCHNSSLGDNWTRLIELIECPLHKLDLTDILPFIYSLDTLKELDISGNAMGDKGFLGLKNGLEMPALQVQQVVEYIARNQSPKSKFAQGEDEFTPGMQRIQ : RINI_RAT
RINI_RAT          : MSLDIQCEQLSDARWTELLPLIQQYQVVRLDDCGLTEVRCKDIRSAIQANPALTELSLRTNELGDAGVGLVLQGLQNPTCKIQKLSLQNCSLTEAGCGVLPDVLRSLSTLRELHLNDNPLGDEGLKLLCEGLRDPQCRLEKLQLEYCNLTATSCEPLASVLRVKPDFKELVLSNNDFHEAGIHTLCQGLKDSACQLESLKLENCGITSANCKDLCDVVASKASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAEGCKDLCRVLRAKQSLKELSLAGNELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFCSVLTKNSSLFELQMSSNPLGDSGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVLLANRSLRELDLSNNCMGDNGVLQLLESLKQPSCILQQLVLYDIYWTDEVEDQLRALEEERPSLRIIS : S52797
S52797            : PPCRLCGEASRGRAPSRDEGLLGSRRPRRAAERCAAALMASEAKQMPRAAPTRVETDLKRELHPPATSHEAPGTKRSPSAATSSASSSTSSYKRAPSSAPKPLKRFKRAAKKGARTRQGPGAEEDLYDFVFIVAEKEDGEEMEIEVACGSDPSCLGLPALEASQRSISTLELFTVPLSTEAALTLCHLLSSWVSLESLTLSYN.GLGSNIFRLLDSLRALGQRLRALHLSDLFSPL.PILELTRAIALPLLRVLSIRVDHDNPGVPGNAGPPSHIIGDEEIPENCLEQLEMGPRGPAPLLCSVLKASGSLQQLSLDPQDLVLQTLKEYNLALKRMADCQSEVLFLLQLTLEITFSFCRLFERPAQFLPNSTLKRLPGNRLGNLALADVFSEDSSLCQLDISSNCIKDGGAFGHLRLFQVTREAIRRLRVVSDSWTHPRPSQIMLAPAQNPNLSVTF : C2TA_HUMAN
C2TA_HUMAN        : ALLELGEDAKLPSTLTGLYVLGRAALDSPGALAELAKLAWERHQSTLQEDPADVAKGLVQHPPRAAESELAFPSFLQ..CFLGALWLLSGEIKDKEQYLLTPRKKRPYDNWLEGVPRFLAGLIQPPARCLGALLPSAAASVDRK..QKVLARYLKRLQPGTLRARQLLELLHCAHEAEEAG...IWQHVVQELPGRLSFLGTR..LTPPDAHVLGKALEAAGQDFSLDLRSTGICPSGLGSLVGLSRFRAALSDTVALWE.SLRQHGETKLLQAAEEKFTIEFKAKSLKDVEDLGTQRTRSSSEDTAGELPAVRDLKLELGPVSGPQAFPKLVRSQHLDLDALSENKIGDEGVSQLSATFPQLKSLET.LNLSQNNITDLGAYKLAEALPSLASLLRLSLYNNCICDVGAESLARVLPMVSLRVMDVQKFTAAGAQQLAASLRRCPPTIPFDSRIS : ILVE_SYNY3

                  : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------201-------211-------221-------231-------241-------251-------261-------271-------281-------291-------301-------311-------321-------331-------341-------351-------361-------371-------381-------391-------401-------411-------421-------431-------441-------451--- :
OrigSeq           : MNLDIHCEQLSDARWTELLPLLQQYEVVRLDDCGLTEEHCKDIGSALRANPSLTELCLRTNELGDAGVHLVLQGLQSPTCKIQKLSLQNCSLTEAGCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLEKLQLEYCRLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQLETLRLENCGLTPANCKDLCGIVASQASLRELDLGSNGLGDAGIAELCPGLLSPASRLKTLWLWECDITASGCRDLCRVLQAKETLKELSLAGNKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAACCQHVSLMLTQNKHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSSLASLLLANRSLRELDLSNNCVGDPGVLQLLGSLEQPGCALEQLVLYDTYWTEEVEDRLQALEGSKPGLRVIS :OrigSeq
cons              : ------HH---------HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH---HHHHHH----------EEEEH----------HHHHH---HHHH------------HHHHHHHH-----------HHHHHHH---HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHEEE-------HHHHHHHHHHH-----HHHEEE----------HHHHHHHHHHHHHHHEEE----------HHHHHHHH-------HEEEE---------HHHHHHHHHH----HHHHH------HHHHHHHHHHHH----HHH---------------HHHHHHHH---HHHHH----------HHHHHHH------HHHEEE-------------HHHHHH-----EEEE----------HHHHHHHH---HHHHHHHHHHHH--HHHHHHHHHHH----------- :cons
dsc               : ------HHHHHH-------HHHHHHHHEE----------HHHHHHHHH---HHHHHHHHHH---HHHHHHHHH---------HHHHH---HHHHH--------HHHHHHHHHHH-------HHHHHHHHH-----HHHHHHH------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHH---HHHHHHHH--------------HHHHHHHHHHHHHHHH---------HHHHHHHH-------HHEEE---------HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH-----HHHHH-------------HHHHHHHHHHHHHHHHH---------HHHHHHH--------EEEE------------HHHHHHHHHHHHHHHH----------HHHHHHHH---HHHHHHHHHHHH---HHHHHHHHHHHH--------- :dsc
mul               : ---HH-H----------------------HHHHHHHHHHHHHHHHHH-----HHHHH----------HHH--------------------------------------HHHHH------------HHHHHHHH-----HHHHHHH-H-------HHHHHHHH----HHHHHH---------HHHHHHHH-----HHHHHH------------HHHHHHH------EE------------EEEH---H------HHHHH----------HHHHHHHHHH---HHHHHH--------HHHHHHHHH-----HHHH-H----HHHH-H----HHH-----HHHHHH----------HHHHHHH------------------------EEEEE------HHH------------HHHHHHHHH--HHHHHHHEE------HHHHHHHHH----------- :mul
nnssp             : -HHHHHHH---------HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH--HHHHHH----------HHHHH----------HHHHH---------------------HHHHHH-----------HHHHHHH---------EE-------HHHHHHHHHHHHH-----EEE-------HHHHHHHHHHH--------EEE-------HHHHHHHHHHHHH-----EEE----------HHHHHHHH--------EEE-------HHHHHHHHHHHHH-----EEE-------HHHHHHHHHHH---------EE------------HHHHHHHH-----------------HHHHHHHH------HHHHHH-------------HHHHHH------EEE----------HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--------EEE :nnssp
phd               : -----------------HHH-------HHHHHHHHHHHHHHHHHHHH--------------------EEEE----------HHHHHHHHHHHHH------------HHHHHHHHHHH--------HHHHHHH---HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHEEEEEE--------HHHHHHHHH----EEEEEEE---------HHHHHHHHHHHHHHHEEE----------HHHHHHH--------EEEEEE---------HHHHHHHHH----EHHHH---------HHHHHHHHH----HHH------------------HHHHH---HHHHH-----------HHHHH-------HHHE---------------EEEEEE-----EEEE----------HHHHHHHH---HHHHHHHHHHHH--HHHHHHHHHHH----------- :phd
pred              : --------HHHHHHHHHHHHHHHHHHEEEE----------------------HHHHH---------EEEEEE--------EEE----------------------------------------HHHHHHHHH-----HHHHHHHHHH-------HHHHHHHHHHHHHH------------------------HHHHHHHHH----------HHHHHHHHH------------------HHHHHHHH-----HHHHHHH---------HHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHH--------------------HHHHHH---------------------HHHHHHHHHH-----EEEEE----------HHHHHHHHHHHHHHEEE-----------EEE---------HHHHHHHHHHH-HHHHHHHHHHHHH---------- :pred
zpred             : HHHHHHHHHH------EEE---------HHHHHHHHHHHHHHHHHHH---HHHHHHHHH-------HHHHEE--------HHHHHHHHHHHHHHH---HEEEEE----HHHHH---------EEEEEEEEEHHHHHHHHHHHHHHHHH----HHHHHHHHHHH--HHEEEEHHHHHHH---HHHEEEEE----HHEEEEE-----------HHHHHHHHHHHHEEEEE---------EEEEEEEEHHHHHHHHEEEEHH----------HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH------EEHHHH-------EEEE--------------EEEEEEEEHHHHHHEH---------EEHHHHHHHHHHHHHHHHEEEEE--------HHHHHH-------HHEEE :zpred


access            : EEBEBBBEEBEEEEEEEB-B-BEE-EEBEBBBEEBBE-BBEEBEEBBEEEEEBBEEEEEEE-EEEBBBEBBBEEBEEEEBBBEEBBBBEEEBEEBBBEBBEEBBEB-EEBBEBBBBEEBEBEEBBEBBBBBBBEEEEEBEEBEBEBBEBBEEBBEBBBEBBEBEEBBEBBBBBE-EBEEEEBEBBBEBBEE-BEBBEBBBBEEBEBEEEBBEBBBEBBEBEEEBEBBEBEEEEBEEEBBBBBBBBBBBEBBEBEBBBBBEBEBEEEBBEEBBEBBEEEEEBEBBBBBEEEBEEEBBEBBBBBBBEEEEEBEEBEEEEBEBBBBBBEEBBBEBBEEEEBBBEBBEE-EBEEEBBEEBBEBBEEEEEBBEBBEBBEBEBEEEEBBBBBBBBBEEEEBEEBEBEEEBBBEEBBBBBBEBBEBBBBBBEEBBBBBBEBBEEBEEEBEEBEEEEEEBE-BE : access

PHD Rel           : 985112332333212211111233331256899999999999999752472010123323678642223312136686431133222323455411224432121114775445431588865514544542122011367655222235245689999887422113565421367521021123455314331478861346778411678999987542221241466778855524533422356654313765224455544237899975230121223211467811235656653203102331334443211123246423433133321442245657886641311123566412111112444345689753157775256523452375575673427898651365799999876654131046898764113599763249 : PHD Rel
Pred Rel          : 007666865769090990999999077979799776776688666575579768657568688778656666667897707775565687788777855588877066656666599990777677787886667765857778666886556668888888988887776588989888867765566667668877787889989896668887888666575555999997866858766866076768887775686776666658888898878787778678776668688889888586086567667897865566686776655777787755699867866668779887779666566667998767776888889888677677956999998990706678568878608878878786606779090099990009900000 : Predator Rel


dssp              : -E---E-----HHHHHHHHHHH----EEE-E-----HHHHHHHHHHHH------EEE------HHHHHHHHHHHH--------EEE---------HHHHHHHHHHH-----EEE------HHHHHHHHHHHHH-------EEE-------HHHHHHHHHHHHH-----EEE------HHHHHHHHHHHHH-------EEE-------HHHHHHHHHHHHH-----EEE------HHHHHHHHHHHH--------EEE-------HHHHHHHHHHHHH-----EEE------HHHHHHHHHHHHH-------EEE------EHHHHHHHHHHHHH-----EEE----E-HHHHHHHHHHHHH-------EEE------EHHHHHHHHHHHHH-----EEE----E--HHHHHHHHHHH--------EEE-------HHHHHHHHHHHHH----EEE- :dssp
define            : EEEEE-----HHHHHHHHHHHHHH-EEEEE-----HHHHHHHHHHHHHHH-EEEEEEE-----HHHHHHHHHHHHH----EEEEEEE-----HHHHHHHHHHHHHHH----EEEE-----HHHHHHHHHHHH------EEEEEEEE------HHHHHHHHHHHH---EEEEE-----HHHHHHHHHHHHHHHEEEEEEEEEEE---HHHHHHHHHHHH------EEEEE-----HHHHHHHHHHHHHH-----EEEEEEE---HHHHHHHHHHHHHHH-EEEE--------HHHHHHHHHH-------EEEEEEE-----HHHHHHHHHHHHHHH-EEEEEEE-----HHHHHHHHHHHHHH-EEEEEEEEE-----HHHHHHHHHHHHHHH----EEEE-----HHHHHHHHHHHHHH---EEEEEEE-EEEEEHHHHHHHHHHHHHH-EEEEEE :define
stride            : -EE--E-----HHHHHHHHHHHH---EE--E-----HHHHHHHHHHHHH-----EEE-----HHHHHHHHHHHHH--------EEE------------HHHHHHHH-----EEE-----HHHHHHHHHHHHHH-------EEE-------HHHHHHHHHHHHH-----EEE-----HHHHHHHHHHHHHHH------EEE-------HHHHHHHHHHHHH-----EEE-----HHHHHHHHHHHHHH-------EEE-------HHHHHHHHHHHHH-----EEE-----HHHHHHHHHHHHHH-------EEE-------HHHHHHHHHHHHH-----EEE-----HHHHHHHHHHHHHH-------EEE-------HHHHHHHHHHHHH-----EEE-------HHHHHHHHHHHH-------EEE-------HHHHHHHHHHHHH----EE-- :stride


Q3 values for 1dfji-1-AUTO.1  View SS in Rasmol

	dssp	define	stride
phd	55.04	46.49	54.17
dsc	56.36	50.66	56.58
pred	56.36	48.03	55.70
mul	54.61	43.20	54.61
nnssp	71.49	57.24	71.27
zpred	41.45	39.47	41.45
cons	60.96	50.88	60.53