Results for 1edd-1-DOMAK


1edd-1-DOMAK    : MINAIRTPDQRFSNLDQYPFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAETE : HYES_MOUSE
HYES_MOUSE      : VGMIKPEPQIYLDTLKAKPNEVVFLDDFGVKPGIRLHFVEMG...SGPALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFYPERVRAVASLNTPFMPPDIPVFNYQLYFQEPGVAEAELEKNMFFRASDETGFIAVHKATEIGGILVNTPEDPNLKITTEEEIEFYIQQFKKTGFGPLYRNTERNWKWSCKGLVPALMVTAEKDIVLRP.EMSKNMEKWIPFLKRGHIEDCGHWTQIEKPTEVNQILIKWLQTE : MUS121A
MUS121A         : AYLHIPPPQ..SPALHSWKTSGKFFTYK....GLRIFYQDVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPRP.HQYSIFEQASIVESLLRHLGLRRINLLSHDYGDIVAQELLYRYKNRSGRLTIKSLCLSNGGIFPETHRPLLLQKLLKDGGVLSPILTRLMN.FFVFSR.....GLTPVFGPYTRPTEELWDWAVIRNNDGNLVIDSLQYI.QRKKFRRRWVGALAIPIHFIYGPLDPINPYPEFLELYRKTLPRSTVSILDHISHYPQLEDPMGFLNAYMGFINSF : CEK07C55
CEK07C55        : VEHVYPEPE......CLKNWNHKFVQLK....NIRMHYVEEGP.ADGDVLLMVHGFPEFWYSWRFQLEHFKHT.HRCIAIDMRGYNTTDRPSGISDYNLTHLVEDIRQFIEILELKRVTLAAHDWGAIVCWRVAMLHSNLIDRLVICNVYNMSKERNKSWYIYLFQSQYIPEIAMRSNKMLEAMFRGSKAGIR....NSENFTDEDMLAWKVFS.QPGGTTGPLNYYRDLFAP..AIPRKLQIVQP....KVLILWGDEDAFLD..KKGAELSVQFCRDCRVQMIGASHWVQQDQPQLVNVYMEQFMNED : S75207
S75207          : .MKISEQT...........LEVGQFHWF.....YRQIQPPQP..TNNPPVMLLHGLPSQSLCWTGVMPLLAEKGLTAIAPDWLGFGFSDILDKDFAYTTAAYEQALGEFFQSLELAKIFLVVQGFLATAGIEYALNHPDQIERLAILNTPVVPPVSLPWPMRQWT.IPLVGDMVTQDPLIIDRTLEGGSGFV.....ISDEKLDIYRKPWLTSAAGRALMAVTKNLPTTNA.LTKIGDRLRTEWQK....PTCFIWGTADKWLS.VEPIEQLVQGVNHLELIKLSEAKHYPQEHFPQEVGTALQTFFRKQ : MTCY33913
MTCY33913       : .MDVLRTPDSRFEHLVGYPFAPHYVDVTADTQPLRMHYVDEGPG.DGPPIVLLHGEPTWSYLYRTMIPPLSAAGHRVLAPDLIGFGRSDKPTRIEDYTYLRHVEWVTSWFENLDLHDVTLFVQDWGSLIGLRIAAEHGDRIARLVVANGFLPAAQRTPLPFYVWR.....AFARYSPVLPAGRLVNFGTVHR.....VPAGVRAGYDAPFPDKTYQAGARAFPRLVPTSPDDPAVPANRAAWEALGRWDKPFLAIFGYRDPILGQADGPLIKHIPGAAGQPHARIKASHFIQEDSGTELAERMLSWQQAT : RERDHLA
RERDHLA         : MSEIGTGF..........PFDPHYVEVL....GERMHYVDVGPR.DGTPVLFLHGNPTSSYLWRNIIPHVAPS.HRCIAPDLIGMGKSDKPD..LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMETWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRP.....LTEVEMDHYREPFLPVD.REPLWRFPNELPIAGEANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPP.AEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPAL : LINB_PSEPA
LINB_PSEPA      : .MSLGAKP..........FGEKKFIEIK....GRRMAYIDEG...TGDPILFQHGNPTSSYLWRNIMPHCAGL.GRLIACDLIGMGDSDKLDPPERYAYAEHRDYLDALWEALDLDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEEWADFPEQDRDLFQAFR.SQAGEELVLQDNVFVEQVLPGLILRP.....LSEAEMAAYREPFLAAEARRPTLSWPRQIPIAGTADVVAIARDYAGWLSESPIPKLFINAEPGALTT..GRMRDFCRTWPNQTEITV.AGAHFIQEDSPDEIGAAIAAFVRRL : MTCY22721
MTCY22721       : MTAFGVEP..........YGQPKYLEIA....GKRMAYIDEG...KGDAIVFQHGNPTSSYLWRNIMPHLEGL.GRLVACDLIGMGASDKLSPPDRYSYGEQRDFLFALWDALDLDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMETWADWPPAVRGVFQGFR.SPQGEPMALEHNIFVERVLPGAILRQ.....LSDEEMNHYRRPFVGGEDRRPTLSWPRNLPIDGEAEVVALVNEYRSWLEETDMPKLFINAEPGAIIT..GRIRDYVRSWPNQTEITV.PGVHFVQEDSPEEIGAAIAQFVRRL : PPY126552
PPY126552       : ...MSQTP............DSRFVSVD....GVRLHYYEDGP.DERPPVIFTHGGPSGWSNFRLSAVAFSAR.YRCYFLDFPQFGQSDMVP.VDGPVFSWHARKLLGFMDALGIRQAHLVNQSFGGCVAIRFAADHPERVATLQLIAQPVERGITQPLPLFSKHAATLMSDYYLADGGPSPAKMAALIRRY.......ELHDDHRLDEENRLRYASANPGFLKLLDIPGAG...QWENLLPVFSRVVA.PTQVFWGLHDWFGG..VDVPMLMLNFADARLYVMGKAAHHVQTECPDEF........... : PSU83881
PSU83881        : MASATLDTS........RPEIANSFVIG....GSSTNYHDVG...EGDPVLLVHGGPTAWANWRLNIPVLAQD.FRVIAPDMFGFGYSDSKG..RIEDKQVWVDQLASFLDGLGIDKISMVGNSFGGGITLAFMIAHPDRVERAVLMGAGLNFPI.TPALDKVWGYVPSVEAMRESLKYLAWDHSRLTEDLI.......QSRYVASARPEAEPYHTFGGADRQANVAMLAS.....REEDIAAIAH....ETLILHGIADQVIP..LDSTVRLATLMQRADLHLFECGHWVQIERMASFNRMVAEFFKHG : MTCY1A119
MTCY1A119       : SIDFTPDPQL.......YPFESRWFDSS....RGRIHYVDEG...TGPPILLCHGNPTWSFLYRDIIVALRDR.FRCVAPDYLGFGLSERPSG.FGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWF.WPALAMKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEHR.....PSSAVMAHYRAVQPNAAARRGVAEMPKQILAARP.LLARLAREVPATLG..TKPTLLIWGMKDVAFRPKTIIPRLSATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERFG.. : MTCY22G812
MTCY22G812      : AGRGERES.....TWRTTMAEPHWIDVKG..PNGDLKALTWGP.AGAPVALCLHGFPDTAYGWRKVAPRLAESGWHVVAPFMRGYAPSSIPAD.GSYHVGALMHDALRVRSAAGGERDVIIGHDWGAIAATGLAAMPDSPFAKAVIMSPLGRVPELLRELPHQLLRSWYILYFQLPWLPVVPLLWRRWSPGY.....HAEEDLRHVDAAIGPEGRRAALGPYRATMRNTRA...ADYADLNRLWTEAPKLPVLYLHGHDDGCAT..SAFTHWTARLPAGSEVAVVHAGHFLQLEQPDKIAELIVAFIGSP : STU02495
STU02495        : .....MEK...........IEHKMVAVN....GLNMHIAELG...QGPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPIPSKFSIFHLVGDVVALLEAIAPDKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSNSNMNPIYGEDYYICRFQVPGEIEAEFAPIGVLKKMLTYRDPAPFYFP.KGKGLEAIADAPIVSTWLEEELDYYANKFEQTGFGALYRALSINSELTAPWTVPTKFIVGEFDLAYHMRGAKEYIHNGVPLLEEVVVLGAAHFVNQERPHEISKHIYDFIQKF : BSZ939342
BSZ939342       : MEAVSPIR..........RFTVDGVNVY......YEHYQNPG....RQTLVCVHGFLSSAFSFRKVIPLLRDK.YDIIALDLPPFGQSEKSR.TFIYTYQNLAKLVIGILEHLQVKQAVLVGHSMGGQISLSAALQKPELFSKVVLLCGYLKRSHIIFGTHIPYF..HLYIKRWLSKEGVMKNLLNVVHDKS....LIDEEMIDGYGRPFQDEQIFKAMTRFIRHREGDLE...PEQLKKMN...K....PALLIWGEEDRIVP.MEIGKRLHADLPNSVLYSLGQTGHLVPEERPELISEHIADFIK.. : B64506

                : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------201-------211-------221-------231-------241-------251-------261-------271-------281-------291-------301------- :
OrigSeq         : MINAIRTPDQRFSNLDQYPFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAETE :OrigSeq
cons            : -----------------------EEE---------EEEE---------EEEEE-------HHHHHHHHHHHH---EEEEE------------------HHHHHHHHHHHHHHH---EEEEEE-----HHHHHHHH------HHEEEEE----------------E---------------E------HHHHHHH----------------------HHHHH------------HHHHHHHHHHHH------EEEEE------------------------EEEE------------HHHHHHHHHHH--- :cons
dsc             : -----------------------EEE--------EEEEEE--------EEEEE------HHHHHHHHHHHHH-----EE-------------------HHHHHHHHHHHHHHHHHHHHEEE-----------------HHHHHHHHEEEE-----------EEEE-------EEEEE---------HHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHH-----------HHHHH-------HHHHHH-------------HHHHH-----HHHHHHHHHHHH---HHHHHHHHHHHH--- :dsc
mul             : ------------------------H----------EEEE----------EEEEE-----------E---HH----EEEEE------------------HHHHHHHHHHHHHHH----EEEE---------HHHHHH----HHHHHEH--------------HHHH-----HHHHH----HHHHH-----------------HH--------------------------------HHHH-HH-H-------EEEEE-----H------HHHHHH-------EHHHHHHHHHH-----HHHHHHHHHHH-- :mul
nnssp           : EE--------HHHHH--------------------EEE----------EEEEE---------HHHHHHHHHH---EEEE-------------------HHHHHHHHHHHHHH-----EEEEE------HHHHHHH--------EEEE---------------------------------HHHHHH-HHHHHHH-------------------HHHHHHHH------------HHHHHHHHHHHH------EEEEE-------------------------EEE------------HHHHHHHHHHHHHH :nnssp
phd             : ----------------------EEEEE--------EEEE---------EEEEEE------HHHHHHHHHHH----EEEEE----------------HHHHHHHHHHHHHHHHH---EEEEEEE---HHHHEHHHHH-----EEEEEEE----------------E---------------E-----------------------------------HHHHH------------HHHHHHHHHHHH------EEEEE------------------------EEEE------------HHHHHHHHHHH--- :phd
pred            : ----------------------------------EEEEEE-------EEEEEE------------HHHHHH---EEEEEE------------------HHHHHHHHHHHHHHH----EEEEE-----HHHHHHH-----HHHHHHH----------------------------------------------------HHHHHHHHH--------------------------HHHHHHHHHHHH-------EEEEE-------------------------EEE----------HHHHHHHHHHHH--- :pred
zpred           : -----------------------EEE--------EEEEE---------EEEEEE---------EEEEEEHH----EEEEEEEEEE------------HHHHHHHHHHHHHHHHHHHHEEEEEE----EEEHHHHH---HHHHEEEEEE-----------------------HHHHH---HEEHH---------------HHHHH-------------------------------HHHHHH----------EEEEE-------------HHHE-------EEHHHHHHHEEH----HHHHHHHHHHH--- :zpred


access          : EEEBBEEEEB-BEBB-B-EBEBEBBBB-EE-EEB-BBBBEEEEEEE-BBBBBBEE-EEBBBBB-BBBBBBBEEBBEBBBBEBBEBE-EEEEEEEEBBBBB-BBEBBBBBBEBBEBEEBBBBB-EBBBBBBBBBBBE-EEEBEBBBBBBBBBEBEEBBEEBBBBBBBBEBBBEBBB-EEBBBEBBBEBBBBBB-EBEEBBEBBBEB-E-E-EE-EBEEBBEEBBEEBEBEBEBBBBBBBEBBBEBBEEBEBBBBBBBB-EEBBBEEEEBBEBBBBBBEEBBBBBBBBBBEBBEEE-EEEBBEBBBEBBEEE : access

PHD Rel         : 9985569876653213355542267643789976168954888889973799826886211135776654314853567623367789898985321346899999999998446516998725431333121321512212789872346897777544321101453201112244421111233222344576521211123556655431010133011112335664145688877875146788426784345555689762111111468852324223555324779258999999997159 : PHD Rel
Pred Rel        : 0066890909986678098899976888999987667886899997860999989998765555555888877666706687777999999999055557788899999998567656897779766667877858777787766666678999999888887667877667875566768876668877658788567688888878799877058666709663389798855888888888677799987706677887899786856355788999866778887666999878999097777000 : Predator Rel


dssp            : ---EE---HHHH----------EEE----------EEEEEEE------EEEE-------HHHH---HHHHHHH--EEEEE---------EE--HHH--HHHHHHHHHHHHHHH----EEEEE--HHHHHH---HHH-HHHEEEEEE-------------HHHH--------HHHHHHHHH------HHHHHHHH-----HHHHHHHH-----HHH-HHHHHHHHHHH---HHHHHHHHHHHHHHHH----EEEEEEE-------HHHHHHHHHH-------EEE------HHHHHHHHHHHHHHHHH--- :dssp
define          : ---EEEEE----------EEEEEEEEE-----EEEEEEE-------EEEEEEEEE----------HHHHHHHHEEEEEEEEE-----EEEEE-----HHHHHHHHHHHHHHHHEEEE-EEEE-HHHHHHHHHH------EEEEEEEEE---------HHHHHH-------HHHHHHHHHHH----HHHHHHHHHH---HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH------EEEEEEEE------HHHHHHHHHHHH-EEEE--------------HHHHHHHHHHHHHHHH :define
stride          : ---EEE--HHHH----------EEE----------EEEEEEE------EEEE-------HHHH--HHHHHHHH--EEEEEE-------EEE--HHH--HHHHHHHHHHHHHHH----EEEEE-HHHHHHHH--HHH-HHHEEEEEEE-----------HHHHHH-------HHHHHHHHHH-----HHHHHHHH-----HHHHHHHHH----HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH---EEEEEEE-------HHHHHHHHHH-------EEE------HHHHHHHHHHHHHHHHHH-- :stride


Q3 values for 1edd-1-DOMAK  View SS in Rasmol

	dssp	define	stride
phd	67.10	59.03	64.52
dsc	62.58	54.84	59.68
pred	67.10	60.00	63.87
mul	61.29	53.23	60.00
nnssp	65.48	56.77	64.84
zpred	59.35	55.81	57.42
cons	69.68	60.65	67.42