Results for 1esl-1-GJB


1esl-1-GJB    : WSYNTSTEAMTYDEASAYCQQRYTHLVAIQNKEEIEYLNSILSYSPSYYWIGIRKVNNVWVWVGTQKPLTEEAKNWAPGEPNNRQKDEDCVEIYIKREKDVGMWNDERCSKKKLALCYTA : MACMBPA
MACMBPA       : KLFVTNGERMPFSEVKALCAGLQATVAAPKNAEENKAIQDVAKD...TAFLGITDEATEGQFMYVTGG.RLTYSNWKKDEPNDHGSGEDCVILLSN.....GLWNDISCTASYIAVCEFP : PIGPSEL
PIGPSEL       : WTYNYSTSAYSWNTSRVFCQRYFTDLVAIQNKKEIAYLNDVIPYYSSYYWIGMRKINNKWTWVGTKKTLTQEAENWAKNEPNNESNNQDCVEMYIKSPLAPGKWNDEPCVKRKRALCYTA : LEM2_BOVIN
LEM2_BOVIN    : WSYHASTEMMTFEEARDYCQKTYTALVAIQNQEEIEYLNSTFSYSPSYYWIGIRKINGTWTWIGTNKSLTKEATNWAPGEPNNKQSDEDCVEIYIKREKDSGKWNDEKCTKQKLALCYKA : LEM3_HUMAN
LEM3_HUMAN    : WTYHYSTKAYSWNISRKYCQNRYTDLVAIQNKNEIDYLNKVLPYYSSYYWIGIRKNNKTWTWVGTKKALTNEAENWADNEPNNKRNNEDCVEIYIKSPSAPGKWNDEHCLKKKHALCYTA : LECH_HUMAN
LECH_HUMAN    : SCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIGP..VNTWMGLH..DQNGPWKWVDGTYETGFKNWRPEQPDDLGGGEDCAHFTDD.....GRWNDDVCQRPYRWVCETE : MMGL_MOUSE
MMGL_MOUSE    : SCYWFSESEKSWPEADKYCRLENSHLVVVNSLEEQNFLQNRLAN..VVSWIGLT..DQNGPWRWVDGTFEKGFKNWAPLQPDNLGGGEDCAHITTG.....GPWNDDVCQRTFRWICEMK : LEM1_BOVIN
LEM1_BOVIN    : WTYHYSKRPMPWEKARAFCRENYTDLVAIQNKGEIEYLNKTLPFSRTYYWIGIRKVEGVWTWVGTNKSLTEEAKNWGAGEPNNRKSKEDCVEIYIKRNKDSGKWNDDACHKAKTALCYTA : D88266
D88266        : DVLFS.DETMNYADAGAYCQSRGMVLVSSAMRDSTMVKAILDFTKDRNYWVGADNEKGAYNFLWNDGV.PTDSDLWSPDEPSNPQSSELCVQIWNR....YNLFDDTGCGNAKRVICEKE : PA2R_RABIT
PA2R_RABIT    : FCYKIVLRSFDHASSGYYCP...PALVTIADRFEQAFITSLISSVVNYFWIALQDQNDTGEYTWKTAGKPVQYTHWNAHQPRSSG...GCVAIRGRNP..IGRWEVKDCVHFKMSLCKQP : LECI_MOUSE
LECI_MOUSE    : SCYWFSRDGLTWAEADQYCQLENAHLLVINSREEQDFVVKHRSQ..FHIWIGLT..DRDGSWKWVDGTYRSNYRNWAFTQPDNQGGGEDCAEILSD.....GHWNDNFCQQVNRWVCEKR : LEM1_MOUSE
LEM1_MOUSE    : WTYHYSEKPMNWENARKFCKQNYTDLVAIQNKREIEYLENTLPKSPYYYWIGIRKIGKMWTWVGTNKTLTKEAENWGAGEPNNKKSKEDCVEIYIKRERDSGKWNDDACHKRKAALCYTA : PGCA_CHICK
PGCA_CHICK    : HCYRHFEERETWMDAESRCREHQAHLSSIITPEEQEFVNSHAQ....YQWIGLSDRAVENDFRWSDGH.SLQFENWRPNQPDN.FAGEDCVVMIWHEQ...GEWNDVPCNYHLPFTCKKG : MACMBPC
MACMBPC       : KFFLTNGEMMTFDKVKALCARFQASVATPRNAAENRAIQNLIKE...EAFLGITDENTEGEFVDLTGN.KLTYTNWNDGEPNNAGSNEDCVLLLKN.....GKWNDIPCSSSHLALCEFP : PSPD_MOUSE
PSPD_MOUSE    : KIFRTADSEKPFEDAQEMCKQAGGQLASPRSATENAAIQQLITAHNKAAFLSMTDVGTEGKFTYPTGE.PLVYSNWAPGEPNNGG.AENCVEIFTN.....GQWNDKACGEQRLVICE.. : S34198
S34198        : KCYYFGEGSKQWIQAKFTCSDLEGRLVSIHSQKEQDFLMQHINK..KESWIGLQDLNMEGEFVWPDGS.PVGYSNWNPGEPN.GGQGEDCVMMRGS.....GQWNDAFCRSYLAWVCEQL : A10871
A10871        : KCYYFGKGTKQWVHARYACDDMEGQLVSIHSPEEQDFLTKHASH..TGSWIGLRNLDLKGEFIWVDGS.HVDYSNWAPGEPT.RSQGEDCVMMRGS.....GRWNDAFCDRKLAWVCDRL : I51921
I51921        : KVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGT.PVNYTNWYRGEPAGRG.KEQCVEMYTD.....GQWNDRNCLYSRLTICDF. : CONG_BOVIN
CONG_BOVIN    : KIFKTAGAVKSYSDAEQLCREAKGQLASPRSSAENEAVTQMVRAQEKNAYLSMNDISTEGRFTYPTGE.ILVYSNWADGEPNNEGQPENCVEIFPD.....GKWNDVPCSKQLLVICE.. : HSLH2MR
HSLH2MR       : SCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNP..FNTWIGLT..DSDGSWKWVDGTYRHNYKNWAVTQPDNLGGSEDCVEVQPD.....GRWNDDFCLQVYRWVCEKR : PSPD_HUMAN
PSPD_HUMAN    : KIFKTAGFVKPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAKNEAAFLSMTDSKTEGKFTYPTGE.SLVYSNWAPGEPNDGG.SEDCVEIFTN.....GKWNDRACGEKRLVVCE.. : A48925
A48925        : HCYRIREEKKIQKYALQACRKEGGDLASIHSIEEFDFIFSQLGYEPNELWIGLNDIKIQMYFEWSDGT.PVTFTKWLPGEPSHNNRQEDCVVMKGKD....GYWADRACEQPLGYICKMV : RATPLA2IR
RATPLA2IR     : .....VLRSFEQASGGYYCP...PALLTITSRFEQAFITSLISSVARYFWIALQDQNNTGEYTWKTMGRPVQYTHWNAHQPSYHG...GCVVLRGGSS..FGRWEVKNCSDFKMSLCKTP : DTNECKMR
DTNECKMR      : ENYHTNKNKMTYNDAVKYCNDRNMGLVKIPNSEVNVNVYNLALKHNLTYWMNGNDIAIGGTWVNTENK.PLVYKNWYTGEPNNWGGNQNCLVAAYHPN...EMWFDIGCDTLNSVICYNA : CL43_BOVIN
CL43_BOVIN    : KIFKTAGAVKSYSDAEQLCREAKGQLASPRSSAENEAVTQLVRAKNKHAYLSMNDISKEGKFTYPTGG.SLDYSNWAPGEPGNEG.PENCLEIYSD.....GNWNDIECREERLVICEF. : PSPD_BOVIN
PSPD_BOVIN    : KIFKTVGSEKTFQDAQQICTQAGGQLPSPRSGAENEALTQLATAQNKAAFLSMSDTRKEGTFIYPTGE.PLVYSNWAPQEPNNGG.SENCVEIFPN.....GKWNDKVCGEQRLVICE.. : MABC_MOUSE
MABC_MOUSE    : KYFVSSVKKMSLDRVKALCSEFQGSVATPRNAEENSAIQKVAKD...IAYLGITDVRVEGSFEDLTGN.RVRYTNWNDGEPNNTGDGEDCVVILGN.....GKWNDVPCSDSFLAICEFS : D73408
D73408        : KAFFTNGKKMPFNEVKTLCAQFQGRVATPMNAEENRALKDLVTE...EAFLGITDQETEGKFVDLTGK.GVTYQNWNDGEPNNASPGEHCVTLLSD.....GTWNDIACSASFLTVCEFS : PSPA_PIG
PSPA_PIG      : KVFSTNGQSVAFWMSLESCVEQVGRIAAPRSPEENEAIASIVKKHNTYAYLGLVEGPTAGDFFYLDGT.PVNYTNWYPGEPRGRG.KEKCVEMYTD.....GQWNDRNCQQYRLAICE.. : PSPA_MOUSE
PSPA_MOUSE    : KVFSTNGQSVNFDTIREMCTRAGGHIAAPRNPEENEAIASITKKYNTYPYLGVIEGQTPGDFHYLDGA.SVNYTNWYPGEPRGRG.KEKCVEMYTD.....GKWNDKGCLQYRLAICEF. : PSPA_CAVPO
PSPA_CAVPO    : KVFATNGQSVDFNAIKETCARAGGDVAAPRNSEENTAISSIVKKYNIYSYLGLTEGHTPGDFHYLDGS.PLNYTNWYPGEPRGRG.KEKCAEMYLD.....GTWNDKNCLQSRLTICEF. : RNU56936
RNU56936      : KCFHVSQTSITWKGSLADCGGKGATLLLVQDQEELRFLRNLTKRIISSFWIGLSY.LSDEKWKWINGS.TLNSDALNITGDTE...KDSCASVSQD......KVLSESCDSDNIWICQKE : LIT2_MOUSE
LIT2_MOUSE    : YCYYLIEDRLTWGEADLFCQMNAGHLVSILSQAESNFVASLVKESGTNVWTGLHDPKSNRRWHWSSGS.LFLFKSWATGAPST.ANRGYCVSLTSN..TAYKKWKDENCEAQYSFVCKFR : LEC3_MEGRO
LEC3_MEGRO    : HCYWASTYQVRWNDAQLACQHPGAYLATIQSQLENAFISETVSN..NRLWIGLND.DLEGHYVWSNGE.ATDFTYWSSNNPNN.WENQDCGVVNYDTVT..GQWDDDDCNKNKNFLCKMP : LECA_PLEWA
LECA_PLEWA    : SYYKYIPNAKSWTDAEFYCQYPGAHLASIHSEDENDFLTEITFKNNSVVWVGGSD.YKDRSFVWTDGS.QWDYQKWRQWEPSNTGGREPCIDFNFVTP...GLWNDEHCDQKFPFICKYT : LECG_CROAT
LECG_CROAT    : LCYKIFNQLKTWEDAEMFCRKPGCHLASFHRYGESLEIAEYISDYHKNVWIGLRDKKKDFSWEWTDRS.CTDYLTWDKNQPDHYQNKEFCVELVSLTG..YRLWNDQVCESKDAFLCQCK : CEW04E123
CEW04E123     : FCYRV.YHGEKFNDAEASCVLLGGHLASIHSLTENTFVNNIASCGIKLAWIGMR..KVGQDWVWTDGT.PSDYFNWAPKQPDN.PKKELCVQTAPDLDKWYENWNNLECNEVMAYICKKA : HYDTYRKIN
HYDTYRKIN     : YCYFIYSIEFDWFKSFSSCQNIGGNLLSIENQEENRFIENDLIKDNDKYWIGLNKWKKNKRFEWSDNT.YTQFFNWITNQPDNNNGIESCVEMNYN.....G.WSDKECKVLNGFICKTK : CELF52E18
CELF52E18     : QLQKF.DAAVTYAGATSACAAQGAELVTIDSFDENDALRKAFDTNALETWIGLKS..LSGAWQWADGS.SATYTNWAPSQPSS...NGLCVQMITDSKYQRGGWKTYGCGKTSSYICEKG : DMU70770
DMU70770      : TCYDFITKGESFDKAQAICKQTGGHLVHDFRGATSSYILSELERRKSLVWIGAQKPITSRTWKWVNGD.VVQKPTWGKDQPNNYNGEQNCVVLDGG.....RNWNDVGCNLDYHFICQHS : PA2R_BOVIN
PA2R_BOVIN    : YSFSTVLESTSFEAAHEFCKKKGSNLLTIKDEAENSFLLEELLAFRSMIWLNAQFDGDNETIKWFDGT.PTDQSNWGIRKPEVHFKPHLCVALRIP....EGVWQLSSCQDKKGFICKME : S48719
S48719        : YSFSTVLDSRSFEDAHEFCKSEGSNLLAIRDAAENSFLLEELLAFGSMVWLNAQFDNNNKTLRWFDGT.PTEQSNWGLRKPDMHLKPHPCVVLRIP....EGIWHFTPCEDKKGFICKME : SSCAP
SSCAP         : HCYRHFPDRATWVDAESQCRKQQSHLSSIVTPEEQEFVNNNAQ....YQWIGLNDKTIEGDFRWSDGH.SLQFESWSPNQPDN.ATGEDCVVMIWHEK...GEWNDVPCNYQLPFTCKKG : MMU56734
MMU56734      : SCYQFFQSTLSWREAWASCEQQGADLLSITEIHEQTYINGLLTG.YSTLWIGLNDLDTSGGWQWSDNS.PLKYLNWESDQPDN..GEENCGVIRTESS...GGWQNHDCSIALPYVCKKK : S58880
S58880        : SCYQFNQEILSWKEAYVSCQNQGADLLSIHSAAELAYITGKED..IALVWLGLNQLYSARGWEWSDFR.PLKFLNWDPGTPVA.IGGSSCARMDTES....GLWQSVSCESQQPYVCKKP : KUCR_RAT
KUCR_RAT      : KFYYF.RDKKSWHEAENFCVSQGAHLASVTSQEEQAFLVQITNAV..DHWIGLTDQGTEGNWRWVDGTFVQSRRFWRKGQPDNNGEREDCVHLQRM.......WNDMACGTAYNWVCKKS : HUMHML2
HUMHML2       : SCYWFSHSGMSWAEAEKYCQLKNAHLVVINSREEQNFVQKYLGS..AYTWMGLS..DPEGAWKWVDGTYATGFQNWKPGQPDDLGGGEDCAHFHPD.....GRWNDDVCQRPYHWVCEAG : AB003431
AB003431      : FCYAFNIEKVNWLVAAASCKVYTARLPEIDSSEKNEFLLKEIAKLNSPSWIGASS.LHHLVWEWVPSLNLNRFSNWQPGEPNDRAPSEHCAVIQNES....GKWVDVSCFLEKRFICEKK : LECH_CHICK
LECH_CHICK    : RCYYFSLSRMSWHKAKAECEEMHSHLIIIDSYAKQNFVMFRTRNE..RFWIGLTDENQEGEWQWVDGTTRSSFTFWKEGEPNNRGFNEDCAHVWTS.....GQWNDVYCTYECYYVCEKP : A46274
A46274        : NCYFM.NSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNRFTWMGLSDLNQEGTWQWVDGSPPSFKQYWNRGEPNNVG.EEDCAEFSGN.....G.WNDDKCNLAKFWICKKS : MANR_HUMAN
MANR_HUMAN    : YQYYF.KEKETMDNARAFCKRNFGDLVSIQSESEKKFLWKYVNR.NDSAYFIGLLISLDKKFAWMDGS.KVDYVSWATGEPN.ANEDENCVTMYSNS....GFWNDINCGYPNAFICQRH : D49514
D49514        : LGYYKHTDPKTWHEAQNICEKEGTHLAVINSEYEAKVLTNMGDFT..WAYVGFHD.YVDGQYVTIFNQ.DAGYAKWHRGEPVP.GSEYNCGCISKED....SSLGVAKCRDKIEFFCEQN : NTC1_RAT

              : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111------- :
OrigSeq       : WSYNTSTEAMTYDEASAYCQQRYTHLVAIQNKEEIEYLNSILSYSPSYYWIGIRKVNNVWVWVGTQKPLTEEAKNWAPGEPNNRQKDEDCVEIYIKREKDVGMWNDERCSKKKLALCYTA :OrigSeq
cons          : -EEEE------HHHHHHHHHH----EEEE--HHHHHHHHHHHHH---EEEEEE-------EEEE-------------------------EEEEEE------------------EEEE--- :cons
dsc           : ------------HHHHHHHH-----EEEE----HHHHHH--------EEEEE-------EEEEE-----HHHHHH--------------EEEEE--------------------EEE--- :dsc
mul           : -EEE-------HHHHHHHHH----HHE------HHHHHHHHH------EEE----------EE--------------------------EEEEE------------------HEEEEE-- :mul
nnssp         : EEEEE------HHHHHHHHHH----EEE---HHHHHHHHHHHHH---EEEEEE--------EEE-------------------------------------------------EEEE--- :nnssp
phd           : -EEEEE-----HHHHHHHHHH----EEEE--HHHHHHHHHHHHH---EEEEEEE------EEEEE------------------------EEEEEE------------------EEEEE-- :phd
pred          : -----------HHHHHHHHHHH---EEE----HHHHHHHHHHHH----EEE--------EEEE--------------------------EEEEEE-------------------EEE--- :pred
zpred         : -E---------HHHHHHHHH----EEEE---HHHHHHHHHH-------EEEEE--------EE-------------------------EEEEEH-------------------HEEEH-- :zpred


access        : EBBEBBEEE-EBEEBEBBBEEEEBEBBBBEEEEEBEBBBEBBEE-BBBBBBBBEEEEEEEEBEBBEEEBEBEBEE--EEEEEEEEEEEBBBBBBEEEEEE-BEB-EEBBEEEBBBBBEEE : access

PHD Rel       : 916642345321487778752166024536626689999996414321567542237785245626876111123679999989999727999835787665567776454451576519 : PHD Rel
Pred Rel      : 006688997567077888888776557657777888898887587767667677899977678889987777877899999999999976888667779999988778887057667000 : Predator Rel


dssp          : -EEEE----E-HHHHHHHHHHH--EE-----HHHHHHHHHH-------EE--EEEE--EEEE----EE-------E-------------EEEE----------EEEE-----EEEEEEE- :dssp
define        : ------EEEEEHHHHHHHHHHHH--EEEEEHHHHHHHHHHHH------EEEE-----EEEEE---EEEE---EEEEE----EEEE---EEEEEE-------EEEE------EEEEEEEEE :define
stride        : -EEEEEEEEE-HHHHHHHHHHH--EE-----HHHHHHHHHH-------EEE-EEEE--EEEE----EE-------E-------------EEEEE--------EEEEE-----EEEEEEE- :stride


Q3 values for 1esl-1-GJB  View SS in Rasmol

	dssp	define	stride
phd	74.17	60.00	73.33
dsc	63.33	60.00	60.83
pred	73.33	65.83	70.83
mul	75.83	60.83	73.33
nnssp	71.67	55.83	67.50
zpred	75.00	63.33	71.67
cons	74.17	61.67	71.67