Results for 1fbab-1-DOMAK


1fbab-1-DOMAK    : TTYFNYPSKELQDELREIAQKIVAPGKGILAADESGPTMGKRLQDIGVENTEDNRRAYRQLLFSTDPKLAENISGVILFHETLYQKADDGTPFAEILKKKGIILGIKVDKGVVPLFGSEDEVTTQGLDDLAARCAQYKKDGCDFAKWRCVLKIGKNTPSYQSILENANVLARYASICQSQRIVPIVEPEVLPDGDHDLDRAQKVTETVLAAVYKALSDHHVYLEGTLLKPNMVTAGQSAKKNTPEEIALATVQALRRTVPAAVTGVTFLSGGQSEEEATVNLSAINNVPLIRPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLKRAKANGDAAQGKYVAGSAGAGSGSLFVANHAY : AB002267
AB002267         : PHQYPALTPEQKKELHDIAKRIVAPGKGILAADESTGSIAKRLSSIGAENTEENRRFYRQLLFTADEKVNPCIGGVITFHETLYHKTDDGVAFTKVIKDKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRSVLKISEHTPSHLAIIENANVLARYASICQQNGIVPIVEPEVLPDGEHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTLLKPNMVTPGHACTKKPPQEIAMATVTALRRTVPPAVAGITFLSGGQSEEEATVHLNAINQCPLLKPWPLTFSYGRALQASALKAWGGKKENTKKAQDEYIKRALANSLACQGKYVASGDAGAAASLFVSNHAY : ALFC_SPIOL
ALFC_SPIOL       : SVAGVRFTPSGADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLISA.PGLGQYVSGAILFEETLYQSTTDGKKMVDVLIEQGIVPGIKVDKGWLPLPGSNDESWCQGLDGLACRSAAYYQQGARFAKWRTVVSIP.NGPSALAVKEAAWGLARYAAITQDNGLDPILEPEIMLDGEHGIDRTFRVAQQVWAEVFFNLAENNVLLEGSSLKPSMVGPGALSARKPPEQVADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQSPN..PWHVSFSYARALQNTCLKTWVEGQEN.VKAQDFACAK..SNSLAQLGKYTGEGESEERKDMFVKATLT : OVU96178
OVU96178         : ..YSQFLTDAQKDELRKIANQIVTPGKGILAADESTGSMDKKLKPIGLENVEENRRLYRQLLFTAGDEMSKYISGVIMFHETFYQKGDDGTPFVQILQKKGILPGIKVDKGVIPMAGTVGEGTTQGLDDLNSRCAQYKKDGAQFAKWRCVHKIGATTPSHMALVEIAEVLARYASICQQHGLVPIVEPETLPDGEHDVHRCQKVTELVLSYTYKALIDHHVYLEGTLLKPNMCMPGMQFKGQSHEEIARATVTALQRTVPVAVPGIVFLSGGQSEEDATLNLNAINQFPGKKPWALTFSYGRALQASALAAWGGKPENIQAAKEAFLKRAQANSLAQLGKYTGGAGSGAAGNLYIANHAY : ALF_SPIOL
ALF_SPIOL        : ...MTAYRGKYADELIANASYIATPGKVILAADESTGTIGKRFPSINVENVESNRRALRELLFTT.PGALPYLSGVILFEETLYQKTADGKPFVDAMKDGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCAQYYTAGARFAKWRAVLKIGPTEPSPLAILENANGLARYGIICQENGLVPIVEPEILVDGTHDIDRCAEVSERVLAACYKALNDHHVLLEGTSLKPNIVTPG.SESKKTPEVIAEYTVRTLQRTVPQAVPGVMFLSGGQSEEEATLNLNAMNKLETKKPWTLSFSYGRALQQSTLKAWQGKEENVAKAQEVFLARAKGNSEATLGKYQGGAGG.ADASLHVKDYKY : ALF1_ENTJA
ALF1_ENTJA       : SPHFPALTPDQKKELADIAQRIVASGKGILAADESVGTMGKRLTQIGLENTDEHRRFYRQLLFTTDPSIKEHIGGIIFFHETMYQKTDGGVPFVKLVKDNGILVGIKVDKGVVPLAGTNGEGTTQGLDGLAERCAQYKKDGADFAKWRCVLKISPNTPSRLSIVENANVLARYATICQQNGLVPIVEPEILPDGDHDLKTCQYITEKVLAATYKALSDHHVYLEGTLLKPNMVTVGTAAPASRPEQVAMATLTALRRTVPPAVPGITFLSGGQSEEDASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYKPTG.TGAAASLFVANHAY : ALFB_CHICK
ALFB_CHICK       : THQFPALSPEQKKALSDIAQRIVASGKGILAADESVGTMGNRLQRINVENTEENRRAFREILFSSDASISKSIGGVILFHETLYQKDSSGKPFPAIIKEKGMVVGIKLDAGTAPLAGTNGETTIQGLDKLAERCAQYKKDGADFGKWRAVLKISSTTPSQLAIQENANTLARYASICQQNGLVPIVEPEVLPDGDHDLQRCQYVTEKVLAAVYKALNDHHVYLEGTLLKPNMVTAGHSCPKKTPQDVAVATVTTLLRTVPAAVPGICFLSGGQSEEEASLNLNAMNQSPLPKPWKLTFSYGRALQASALAAWLGKSENKKAAQEAFCKRAQINSLACRGQYVTSGKTDTAASLFTASYTY : A01114
A01114           : MNAPKKLPADVAEELATTAQKLVQAGKGILAADESTQTIKKRFDNIKLENTIENRASYRDLLFGT.KGLGKFISGAILFEETLFQKNEAGVPQVNLLHNENIIPGIKVDKGLVNIPCTDEEKSTQCLDGLAERCKEYYKAGARFAKWRTVLVIDKGKPTDLSNHETAWGLARYASICQQNRLVPIVEPEILADGPHSIEVCAVVTQKVLSCVFKALQENGVLLEGALLKPNMVTAGYECTAKTTQDVGFLTVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALGP.HPWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAGG.ENASLYEKKYVY : DMALD1
DMALD1           : TTYFNYPSKELQDELREIAQKIVAPGKGILAADESGPTMGKRLQDIGVENTEDNRRAYRQLLFSTDPKLAENISGVILFHETLYQKADDGTPFAEILKKKGIILGIKVDEGVVPLFGSEDEVTTQGLDDLAARCAQYKKDGCDFAKWRCVLKIGKNTPSYQSILENANVLARYASICQSQRIVPIVEPEVLPDGDHDLDGAQKVTETVLAAVYKALSDHHVYLEGTLLKPNMVTAGQSAKKNTPEEIALTTVQALRRTVPAAVTGVTFLSGGQSEEEATVNLSAINNVPLIRPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLKRAKANGDAAQGKYVAGSAGAGSGSLFVANHAY : A54500
A54500           : LPAYNRLKTPYEAELIETAKKMTAPGKGLLAADESTGSCSKRFAGIGLSNTAEHRRQYRALMLEC.EGFEQYISGVILHDETVYQKAKTGETFPQYLRRRGVVPGIKTDCGLEPLVEGAGEQMTAGLDGYIKRAKKYYAMGCRFCKWRNVYKIQ.GTVSEAVVRFNAETLARYAILSQLCGLVPIVEPEVMIDGTHDIETCQRVSQHVWSEVVSALHRHGVVWEGCLLKPNMVVPGAESGLKTAEQVAEYTVKTLARVIPPALPGVTFLSGGLSEVMASEYLNAMNNCPLPRPWKLTFSYARALQSSAIKRWGGKESGVEAGRRAFMHRAKMNSLAQLGKYNRADDDKDSQSLYVAGNTY : S48639
S48639           : ALAAPSLCAPGDEELIKTAGTVASKGRGILAMDESNATCGKRLDSIGVENTEENRRAYRELLVTA.PGLGQYISGAILFEETLYQSTASGKKFVDVMKEQNIVPGIKVDKGLVPCP.TPTMSWCMGLDGWTS.AAEYYKAGARFAKWRSVVSIP.HGP.SIMLPRLAYGLARYAAIAQNAGLVPIVEPEVLLDGEHDIDRCLEVQEAIWAETFKYMADNKVMLQGILLKPAMVTPGADCKNKGPAKVAEYTLKMLAAR.APPVPGIMFLSGGQSELESTLNLNAMNQSPN..PWHVSFSYARALTNTVLKTWQASPRT.VQAPRLAAQARKANSDAQQGKYDATTEGKEAAGMYEKGKGY : EGRNAALP1
EGRNAALP1        : TWHRPTPAAVAFASASEGAQTFVAPAAGILAADESRPTCGARLKSIGVENTEENVHSSRSCVHRT.WLQRGNILGVIMYEETLYQKDKNGKPFVQIINEAGAVAGVKVDTGIAPLPGADDEGYTMGLDGLRERCQEYYRQGARFAKWRAVLRIDKGLPSDRSILANATGLAQYAAICQECGLVPIVEPEILMDGDHDIETAAAAAERVLVAVYDALATQGVLLEGTLLKPNMVTPGVDSGIKTPETLPIFTC.ALLATVPAAVAGISFLSGGSSEEDASLNLNAINAIPYRKPWALTFSFGRALQASTLKTWGGKDEN........IARLRRCSLSVPSQWPGKYQGSGQASLFVKGYKY : ALF_ARATH
ALF_ARATH        : ...MSAFVSKYEDELIKTAKYIATPGRGILAADESTETIGKRFAGINVENTESNRQAYRELLFTS.PGSYPCLSGVILFEETLYQKTSDGKPFVDLLMENGVIPGIKVDKGLVDLAGTNGETTTQGLDSLGARCQQYYEAGGRFAKWRAFFKIGATEPSVLSIQEDARVLARYAIICQENGLVPIVEPEVLTGGSHDIKKCAAVTETVLAAVFKALNYHHVLLEGTLLKPNMVTPG.SDSPKAPELIAEYTVTALRRTVPPAIPGIVFLSGIQREEQATLNLNAMNKLDVLKPWTLTFSFGGALQQSAIKAWAGKPENVAKAQAKFLTRCKANKDATLGKYTGWASGDSAANLVVIGYRY : ALFB_SPAAU
ALFB_SPAAU       : THQFPSLSPEQKKELSDIAQRIVAPGKGILAADESTGTMGKRFQNINVENIEENRRCFRDILFSTDASIANCVGGIIFFHETLYQKSSNGKLFPQVVKEKGIVVGIKVDKGTAPLMGTDKETTTQGLDGLSERCAQYKKDGCDFAKWRCVLKISDGCPFALAIAENANVLARYASICQMNGLVPIVEPEILPDGDHDLQRCQYATEKVLAAVYKALSDHHVYLEGTLLKPNMVTPGHSCPKKTPQEVAMATVTALRRTVPASVPGICFLSGGQSEEEASIHLNAINQVPLHRPWKLTFSYGRALQASALAAWQGKDANKAATQQVFVTRAKINGLASKGEYKPSGSADQASSLYTASYVY : ALF_SCHMA
ALF_SCHMA        : SRFQPYLTEAQENDLRRIAQAICAPGKGILAADESTATMGKRLQQIGVENNEENRRLYRQLLFSADHKLAENISGVILFEETLHQKSDDGKTLPTLLAERNIIPGIKVDKGVVPLAGTDNETTTQGLDDLASRCAEYWRLGCRFAKWRCVLKISSHTPSYLAMLENANVLARYASICQQNGLVPIVEPEVLPDGDHDLLTAQRVTEQVLAFVYKALADHHVYLEGTLLKPNMVTAGQACKKATPQENALATVRALQRTVPPAVPGITFLSGGQSELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKFEGNMGTTLGDSLFVANHAY : ALF2_CAEEL
ALF2_CAEEL       : GAFKDSLTQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTT.PNLNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGLDKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVEPEVLCDGEHDLARAQKVTEQVLAFVYKALADHHVYLEGTLLKPNMVTPGQSSASKSHEAIGLATVTALRRGVPAAVPGITFLSGGQSELDATANLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGKDENIAAAQKTLLHRSKANGDASLGKYAGEDAAGAAASLFVAKHSY : EFTU_TAXOC

                 : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------201-------211-------221-------231-------242-------252-------262-------272-------282-------292-------302-------312-------322-------332-------342-------354------- :
OrigSeq          : TTYFNYPSKELQDELREIAQKIVAPGKGILAADESGPTMGKRLQDIGVENTEDNRRAYRQLLFSTDPKLAENISGVILFHETLYQKADDGTPFAEILKKKGIILGIKVDKGVVPLFGSEDEVTTQGLDDLAARCAQYKKDGCDFAKWRCVLKIGKNTPSYQSILENANVLARYASICQSQRIVPIVEPEVLPDGDHDLDRAQKVTETVLAAVYKALSDHHVYLEGTLLKPNMVTAGQSAKKNTPEEIALATVQALRRTVPAAVTGVTFLSGGQSEEEATVNLSAINNVPLIRPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLKRAKANGDAAQGKYVAGSAGAGSGSLFVANHAY :OrigSeq
cons             : --------HHHHHHHHHHHHHHHH----EEEE-----HHHHHHHH------HHHHHHHHHHHH-----------EEEEEHHHHHE------HHHHHHHH-----EEEE---------------HHHHHHHHHHHHHHHH---HHHHHHEEEEE------HHHHHHHHHHHHHHHHHHH----EEEE-----------HHHHHHHHHHHHHHHHHHHH---EEE--------------------HHHHHHHHHHHHHH--------EEEE-----HHHHHHHHHHH---------EEEE-HHHHHHHHHHHHH-----HHHHHHHHHHHHHHH--HHH--------------EEEEE---- :cons
dsc              : -------HHHHHHHHHHHHHHHHHH-----HHH--HHHHHHHHHH-----HHHHHHHHHHHHH------------EEEEHHHHHH------HHHHHHHH-----EEE---------------HHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-------HHHHHHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHEEE---------------------HHHHHHHHHHHHH--------EEEE-----HHHHHHHHHHH----------EEE--HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHH---- :dsc
mul              : ----------HHHHHHHHHHHEH-----EEEH------HH---H-------------HH-EEE------------EEEEHHHH---------HHHHH----EEEEE---------------------HHHHHHHHHH-----HHHHHHHHEH--------EEHH---HHHHHHEEEE------EEE----HH------HHHHHHHHHHHHHHHHHHHH--HHHHHHH------------------HHHHHHHHH--H-----EEEEEEE-----HHHHHHHH------------EEEE----HHHHHHHHHHH------HHHHHHHHHHH----H-----------------EEEE---- :mul
nnssp            : --------HHHHHHHHHHHHHHHH----EEE------HHHHHHHHH-----HHHHHHHHHHHH------------EEEEHHHHH-------HHHHHHHH-------------EE---------HHHHHHHHHHHHHHHH----HHHHHHEEE--------HHHHHHHHHHHHHHHHHHH---EEEE-----------HHHHHHHHHHHHHHHHHHHH---EEE--------------------HHHHHHHHHHHHHHH-------EEEE-----HHHHHHHHHHH---------EEEE--HHHHHHHHHHHH-----HHHHHHHHHHHHHHH--------------------EEEE---- :nnssp
phd              : --------HHHHHHHHHHHHHH-----EEEEE-----HHHHHHHH------HHHHHHHHHHHH--------E--EEEEEEEE-EEE------HHHHHH----EEEEEE---E--E----------HHHHHHHHHHHHHH---HHHHEEEEEEE-----HHHHHHHHHHHHHHHHHHHH----EEEEE-EE-------HHHHHHHHHHHHHHHHHHHH---EEEEE-E----EE----------HHHHHHHHHHHHHH--------EEEE----HHHHHHHHHHHH--------EEEEEHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH--HHH--------------EEEEEE--- :phd
pred             : ---------HHHHHHHHHHHHHH-----EEEE-------------------HHHHHHHHHHHHH----------EEEEHHHHHH--------------------EEEE-------------EEE-----HHHHHHHHHH---HHHHHHHEEEE--------HHHHHHHHHHHHHHHHHH---EEE-------------HHHHHHHHHHHHHHHHHHH---EEE---------------------HHHHHHHHHHHHHH-------EEE------HHHHHHHH------------EEEEEHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH--------------------EEE----- :pred
zpred            : ----------HHHHHHHHHHEEE----EEEEHHHHHHHH--EEE------HHHHH--HHEEEE---------EEEEEEHHHHHHH-------EHHHHH---EEEEEEEEEEEEEE--------EEEH---HHHHHH-----HHHHHHHHEEE--------EEHHHHHHHHHHHEEEEE----EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEHHHHHHHEEEEEEE---------HHHHHHHHHEEE-----EEEEEEEE-----HHHHHHHHHHHEE-----EEEEEEE--HHHHHEEHHHH------HHHHHHHHHHH-----HH-EEEE--------HHHHHHH---- :zpred


access           : EEE-EEBEEE-EEEB-EBBEEBBBEBEBBBBBEEBEEEBEEEBEEBEBE--EEE-EBBEEBBBEBEEEBBEBBBBBBBBEE-BEEEEEEEEEBBEBBEEEBBBBBBEBEEEBBEBBEEEEEEBBEBBEEBBEEBEEBEEEEBEBBEB-BBBEB-EE-EE-BBBBEBBEBBBEBBBBBE-EEBBBBB-BEBBEE-EEEBEEB-EBBEEBBBBBBEBBBEBBBBBEB-BBEE-BB-BE-E-EEE-EEEBBEBBBEBB-EEBEEBBEBBBBBBEEEEEEEBEBEBEBBEEBE-EEEBBBBBBBBEBBEBBBBEB-EEEEEEBEEBEEEBBEEBEBEEEB-EEE--EEEEEEEBBEBBBBE-EE : access

PHD Rel          : 988766653578999999876314886267751355224444431376765676999998642168642111123889873122325888742655423761567663774101116887643211125999999976223212211578885788824666678999999999987349914554011136778532345688999999999875333167752114754215787778887367767899988734666775168871896588988887543259999962677436558999999986288722699999988886422234214322575533211144531379 : PHD Rel
Pred Rel         : 000888976689999999988659909650005799777655755566767786099999988889999666565600788585657999985567767668666678977056779999778767777788999987677657776876686899997556676668899099888886876777097709999966587878999999909988776596556600999077779997999678789799880780899990909979999756676866667799989997060556688999999898697787789999999999967777676677899997777676677000 : Predator Rel


dssp             : --------HHHHHHHHHHHHHH-----EEEEE---HHHHHHHHH-------HHHHHHHHHHHH---HHHHH-EEEEEE-HHHH--E-----EHHHHHHH---EEEEE----EEE-------EEE-----HHHHHHHHHH--EEEEEEEEEE--------HHHHHHHHHHHHHHHHHHHH---EEEEEEEE-------HHHHHHHHHHHHHHHHHHHHH----HHH-EE---------------HHHHHHHHHHHHHHH------EEEE------HHHHHHHHHHH---------EEEEEE-HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH------------------------ :dssp
define           : ---EEEEHHHHHHHHHHHHHHHHH---EEEEE--HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH--EEEEEHHHHHH------HHHHHHHHHEEEEEEEEE------------EEEEE--HHHHHHHHHHHHEEEEEEEEEEEEEE----HHHHHHHHHHHHHHHHHHHHHHEEEEEEEE--------HHHHHHHHHHHHHHHHHHHHHHHH-----EEEEEEEEEE----EEEEHHHHHHHHHHHHHHHH-----EEEEEE---HHHHHHHHHHHHHHH-EEEEEEEEE------HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHEEEE-----EEEEEEEEEE-- :define
stride           : --------HHHHHHHHHHHHHHH----EEEEE---HHHHHHHHHH------HHHHHHHHHHHHH--HHHHH-EEEEEE-HHHHH-E-----EHHHHHHHH--EEEEE---EEEE-------EEEE----HHHHHHHHHHH---EEEEEEEEE-------HHHHHHHHHHHHHHHHHHHHH--EEEEEEEEE------HHHHHHHHHHHHHHHHHHHHHH---HHH-EE--E------------HHHHHHHHHHHHHH-------EEEEE-----HHHHHHHHHHHH--------EEEEEE-HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH----------------------- :stride


Q3 values for 1fbab-1-DOMAK  View SS in Rasmol

	dssp	define	stride
phd	80.83	70.00	79.44
dsc	76.11	69.17	76.67
pred	78.33	63.06	76.11
mul	69.44	55.56	67.22
nnssp	80.28	68.06	79.17
zpred	65.28	58.61	65.83
cons	80.56	71.11	80.28