Results for 1fua-1-AUTO.1


1fua-1-AUTO.1    : MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTGIPYEKLTESHIVFIDGNGKHEEGKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSILNRSIPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVVLEKF : RNU35775
RNU35775         : LTQEQMKKGHDPTGLLALQLGMVTPIPGADTSSYVKGIIIIPRGLPFSEATASALVKVNIIEVVDQGSTDHSGFSPHAAIYSTRPDVKCVIHIHTLATAAVSSMKCGILPISQESLILG..DVAYYDYQGSLDEE.EERIELQKVLGKVLVLRNHGVVALGETLEEAFHYIFNVQMACEIQVQAVAGAHQKWKVGEIEFEGLMRTL : HUMALAD13
HUMALAD13        : MIQEQFKKGKNPTGLLALQLGMVTPVRGSDSIAYDKGFLIVPFGLLYSEVTASSLVKINLQDIVDRGSTNQAGFTLHSAIYAARPDVKCVVHIHTPAGAAVSAMKCGLLPISPEALSLG..EVAYHDYHGILVDE.EEKVLIQKNLGKVLILRNHGLVSVGESVEEAFYYIHNLVVACEIQVRTLASAPPKWQIGEQEFEALMRML : H69309
H69309           : RSFEIMFEEAIKVGKLLAAARLIDGASGNMSFKMADSIYITRSGENLDDLTDSSFVKIKPGEFVKEAS...VDQLIHLKIYEK.TDYNAVLHCHGVFNVVLGNKMDRIEPLDLEGKLYFG.EVEVVEGQF.GSPELAEGIAEVVKRKGVAVVRNHGIYAAGKSLRDAYNKASYVEHSCEILYRSMLLN...........KL..... : LSPLCPRF2
LSPLCPRF2        : EKIKILKRAVFQASMVLVHQGLINSNWGNVSAIDRELIVIKPNGVAINQMSVDDMVMTDLDGKVLGGKWPSSDILTHVVLYQNFKKVQSIAHSHSKYAVAFSQSGRDIPVYGTTHADMFYGPVPCTRQLTERAYEIVETFKERKLNEQGVLVAGHGPYSWGANVEEAVENSTILEEVSGMALHTEILLKARQEIPKCLQNKRYFRK : SGAE_MYCPN
SGAE_MYCPN       : KMINDLKEQVFQTNLLLPKYGLVIHTWGNVSMIAPNRFVIKPSGVSYDKMRAQDMVVVDLDNVLDTNGLPSSDTPTHALMYKHCPDIKAIVHTHSTFATSFAQADKPIPCLGTTHADNFFGPIPCTRALSNGAYEILEHLKNNQVDVAAILVKEHGSFVWSKNGKDAVDRALTLEQVAQMALYTQMINPHMKEANPALQQKHYNRK : ARAD_BACSU
ARAD_BACSU       : .MLETLKKEVLAANLKLQEHQLVTFTWGNVSGIDREKIVIKPSGVEYSDLTADDLVVLNLDGEVVEGSLPSSDTPTHVYLYKAFPNIGGIVHTHSQWATSWAQSGRDIPPLGTTHADYFDSAIPCTREMYIHDYEIAETFQHHNYEQPGVLVNNHGPFCWGTDALNAIHNAVVLETVAEMAYHSIMLNKDVTPINTVLHEKHFYRK : SGBE_HAEIN
SGBE_HAEIN       : .MLAQLKKEVFEANLALPKHHLVTFTWGNVSAIDREKVVIKPSGVDYDVMTENDMVVVDLFGNIVEGNKPSSDTPTHLELYRQFPHIGGIVHTHSRHATIWAQAGLDIIEVGTTHGDYFYGTIPCTRQMTKGNYEIVETFLSRGIEPPAVLVHSHGPFAWGKDANNAVHNAVVLEEVAYMNLFSQQLNPYLSPMQKDLLDKHYLRK : FUCA_HAEIN
FUCA_HAEIN       : MNRAELSQKIIDTCLEMTKLGLNQGTAGNVSVRYKDGMLITPTGMPYHLMKTENIVYVDGNGKHEENKLPSSEWQFHLSVYHTRPEANAVVHNHSIHCAGLSILEKPIPAIHYMVAVSGTDHIPCVPYATFGSHKLASYVATGIKESKAILLAHHGLITCGENLDKALWLAQEVEVLASWYLKLLSTGLEIPLLSKEQMQVVLGKF : YGBL_HAEIN
YGBL_HAEIN       : MTDLAQKELMVQLGRSFYERGYTVGGAGNLSVRLDDNVLVTPTGSSLGRLSVERLSVLDMEGNLLGGDKPSKEAVFHLAMYKKNPECKAIVHLHSTYLTALSCLDNLEPFTPYYVMRVG..KMQVIPYYRPGSPKIAEELSNRALTGKAFLLANHGVVVTGSDLLDAADNTEELEETAKLFFTLQGQ..KIRYLTDTEVKDLENRG : YGBL_ECOLI
YGBL_ECOLI       : KVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGLLATPTGSCLGNLDPQRLSKVAADGEWLSGDKPSKEVLFHLALYRNNPRCKAVVHLHSTWSTALSCLQGLRPFTPYVVMRMG..NVPLVPYYRPGDKRIAQDLAELAADNQAFLLANHGPVVCGESLQEAANNMEELEETAKLIFILGDR..PIRYLTAGEIAELRS.. : C69054
C69054           : MIHLNPVREVVDVSLHIYRTGLVSGI.GNVSARMGDRVFITPTMVPLGEVSLRNVVLVDLNGRVIRGGRPSSELGLHLEVYRARPDVGGIVHTHSPHARAFSIAGVQ.IEKMEGFMGLGRGYIPMVPYHPPGSRELAAECGRVMVDEDAAILENHGVVCAGEGLRDALLLAEFIEESARTQFIAETLK.....S....MKK..... : YE18_METJA
YE18_METJA       : ....MDKKQFIKICRKLYDRKYVVGSGGNVSVKEGDKIYLTPTGSILGFLKEDDIAEMDLDGNVIKGK.PTSEKNLHLMIYRKRNDINAIIHTHSLISTFLSTINKE.IELLTPEGKIFLKKIGYVDYYEAGSLKLAEETAKR..DEDVIILKNHGVVCLGKDLIDAYIKVEVLEEQAKLTLLNLLVK.................. : HSNOS1S28

                 : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------201--- :
OrigSeq          : MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTGIPYEKLTESHIVFIDGNGKHEEGKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSILNRSIPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVVLEKF :OrigSeq
cons             : --HHHHHHHHHHHHHHHHH---E-------EEE----EEEE-------------EEEE----------------HHHHHHH-------EEEEE------HHHH------------------------------HHHHHHHHHHHH---EEEE-----EE----HHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHH--- :cons
dsc              : --HHHHHHHHHHHHHHHHH--EE--------------EEE-------------HHEEE----------------HHHHHHH------EEEEE-------HHHH---------EEEE-----------------HHHHHHHHHHHHHHHHHHHH----EEE--HHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHH--- :dsc
mul              : -HHHHHHHHHHHHHHHH----EE-------EEE----EEEE--------H---HEEEE----H-----------HHHHHHH------HHEEH------HHHH----------------------EEE------HHHHHHHHHHH---HHH-E-----EEE----HHHHHHHHHHHHHHHHHHHHHH-----------HHHHHH--- :mul
nnssp            : HHHHHHHHHHHHHHHHHHH------------EE----EEE--------------EEEE---------------HHHHHHHH-------EEEE-----------------------------------------HHHHHHHHHHHH---EEEEE----EE----HHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHH :nnssp
phd              : --HHHHHHHHHHHHHHHHHH--EE------EEEE---EEEE-------------EEEEE----------------EEEEEEE------EEEEE---HHHHHHHH-----------------------------HHHHHHHHHHH----EEEE-----EE----HHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHH--- :phd
pred             : ---HHHHHHHHHHHHHHH-----------EEEE---EEEEE------------EEEEE---------------HHHHHHHHH-----EEEEEE----EEEE--------------------------------HHHHHHHHHHHHHHHEEEE-----EEEHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHH--- :pred
zpred            : HHHHHHHHHHHHHHHHHH-EEEEE-----EEEE---EEEEEE----EEEHHHHHHEEEHHHHHEE--------HHHHHHHH-----HHEEEEEE---HHHHHH------EEE--EE------EEEEE-------HHHHHHHHHHHHHHHHHEEEEEEEEE-HHHHHHHHHHHHHHHHHHHHHHHH------------HHHHH---- :zpred


access           : EEEEEBEEEBBEBBBBBBEBBBBBBBBBEBBBBBBEEBBB-BEB-BBBEBEBEBBBBBEBEEEBBEEEEEEEEBBBBBBB-EE-EEBEBBBBBBBBBBBBBBBBEEEBBBBBBBBBBBB-E-BBBBEEB-EEBEEBBEEBBE-EEEEEBBBBBE-BBBBBBEEBEEBBEBBBBBEBBBEBBBBBBBBEEEBEEBBEE-BEEBBEEE : access

PHD Rel          : 94468888876444544210312026776214415765884499644322345147983576454799987543324445533667645875122114323321368754444422247787542224578747999999987325733887168962224234899988899999999999876326466421278887643279 : PHD Rel
Pred Rel         : 00777798999888875566556788998777777679908899886666776689087999977788999996577866757999869987777655676657886666785666668887777777788876888999887667677707779660856677888999999999999998977650998676576980008000 : Predator Rel


dssp             : --HHHHHHHHHHHHHHHHH---------EEEEEE--EEEE-E----HHH--HHH-EEE-----E-----E---HHHHHHHHHH-----EEEEE--HHHHHHHHH---E----HHHHHH----E-EE-------HHHHHHHHHHH----EEEE---EEEEEE--HHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHH- :dssp
define           : -HHHHHHHHHHHHHHHHHHHH-----EEEE-----------------------EEEEEE--------EEEE--HHHHHHHHHHHH---EEEEE-HHHHHHHHHHEEEE----HHHHHHH--EEEEEEEE---HHHHHHHHHHHHH-----------EEEE--HHHHHHHHHHHHHHHHHHHHHHHHH---EEEEEHHHHHHHHHHH :define
stride           : --HHHHHHHHHHHHHHHHHH--------EEEEEE--EEEE-E----HHH--HHH-EEE-----E-----E--HHHHHHHHHHH-----EEEEE--HHHHHHHHH---E----HHHHHH----E-EE-------HHHHHHHHHHH----EEEE---EEEEEE--HHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHH- :stride


Q3 values for 1fua-1-AUTO.1  View SS in Rasmol

	dssp	define	stride
phd	77.67	65.05	78.16
dsc	72.33	65.53	70.87
pred	76.21	63.59	75.73
mul	73.30	63.11	72.82
nnssp	77.18	67.48	76.70
zpred	69.42	54.37	68.45
cons	79.61	66.99	79.13