Results for 1gep-2-AS


1gep-2-AS    : TANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRG : NIR_SPIOL
NIR_SPIOL    : RQNWQIRGVVLPDVPEIIKLESVGLTSLQSGMDNVRNPVRGNLSITNLPRKWNPCVIGSHDLYEHPHINDLAYMPATKNGK.FGFNLLVGGFFSIKR.....CEEAIPLDAWVSAEDVVPVCKAMLEAFRDLGFRGNRQKCRMMWLIDELGMEAFRGEVEKRMPEQVLERASSEDWERR : PEENIRNRT
PEENIRNRT    : RQNFQLRGIRIEDLPEIFRFDQAGLTSIQSGMDNVRNITRGNSSFSNLPRKFNIAIAGCRDNSVHAEINDIAFVPAFKDGT.LGFNILVGGFFSGKR.....CEAAIPLNAWVDPRDVVAVCEAILTVYRNLGLRANRQKARLMWLIDEMGLEPFREAVEKQLGYAFTPAAAKDLWDKR : CYSI_SALTY
CYSI_SALTY   : TANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRG : NIR_SYNP7
NIR_SYNP7    : RQNLQLRGLLLEDTPEFLELHAVGLTSVQSGMDNVRNITQGNSEFTNLPRKFNIAIEGGRDNSIHAEINDLAFTPAYQDGT.LGFNVWVGGFFSSTR.....VAPAIPLNAWV.PADVIRLSRAILEVFRDNGSRGNRQKTRLMWLIDEWGIERFRQVVSEAYG.APLAAAAPEDWEKR : CYSI_THIRO
CYSI_THIRO   : GCGDVNRNVLCNPNPVESALHREVYDWAKRISEHLLPRTEPIYGRTYLPRKFKTAVGVPPHNDVDVYANDLGFAAVADGSRLIGFNVSAGG.TGRNTGIPATFPRLADVLGFVEPERTLAVAEAVVTTQRHFGDRLDRTQARLKYTIERMGLDAFRDEVERRAGIRFAPARPIGFTDQG : YJ9F_YEAST
YJ9F_YEAST   : AAGDVNRNVMVSALPTNAKVHQQIADMGKLISDHFLPKTEPIYGPTYLPRKFKFNIAVPPYNDVDVLSIDVGLVAIVNTQIVEGYNVFVGGGMGTTHNNKKTYPRLGSCLGFVKTEDIIPPLEGIVIVQRDHGDRKDRKHARLKYTVDDMGVEGFKQKVEEYWGKKFEPERPFEFKSNI : S71437
S71437       : ACGDLNRNVLAPAAPYVKKDYLFAQETADNIAALLSPQSEPIYGTQFLPRKFKVAVTVPTDNSVDLLTNDIGVVVVSDNGEPQGFNIYVGGGMGRTHRMESTFARLAEPIGYVPKEDILYAVKAIVVTQREHGRRDDRKYSRMKYLISSWGIEKFRDVVEQYYGKKFEPSRELPEWEFK : S74718
S74718       : ACGDINRNVMAPAAPFRDKEYGYAWDYANKVADLLSPQSEPIYGQQFMPRKFKISVTVPGDNSIDVYTHDISLVVITDHGELRGFNVLAGGGLGRTHNKEETFARAADPIGYVSKDDVYDLVKAIVATQRDYGDRHNRRHARMKYLLADWGVEKFRKQVETYMGKPFQSFKPLPAWRYQ : SIR_SYNP7
SIR_SYNP7    : ACGDVNRNVMAPPAPFRDREYEWARTYANNIADLLTPESEPLYSDRYLPRKFKIAVTVPGDNSIDLFTQDIGLVVIGNRGELEGFNVYVGGGMGRTHNKEETFARLADPLGFVPAADIYAAVQAIVATQRDYGDRSNRRHARMKYLIHDWGIAKFKEAVESVFGKAIAPVRELPPFRYR : GLB1_PARCH

             : 147-------157-------167-------177-------205-------215-------225-------235-------245-------255-------265-------275-------285-------295-------305-------315-------325-------335------ :
OrigSeq      : TANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRG :OrigSeq
cons         : --------E-------HHHHHHHHHHHHHHHHHH------------------EEEEE--------EE----EEEEEE-----EEEEEEE------------HHHHH---------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHH-HHHHHHHHHHHH---------------- :cons
dsc          : -------HH---------HHHHHHHHHHHHHHHH------------------EEEEE---------------EEE-------EEEEEEE------------HHHHHHHH--------HHHHHHHEEHHHHH--HHHHHHHHHHEEHHHHHHHHHHHHHHHHHHH--------------- :dsc
mul          : --------EE------H-HHHHHHHHHHHHHHHHH-----------------EEEEE--------EH-----EEEE--------EEEE---------------HHH-----------HHHHHHHHHEE------------HHEEEEEHHH-HHHHHHHHHHHH---------------- :mul
nnssp        : --------EE-------HHHHHHHHHHHHHHHHHH------------------EEEE---------------EEEE--------EEEEE------------HHHHH---------HHHHHHHHHHHHHHHH-------HHHHHHHHHHHH-HHHHHHHHHHHH---------------- :nnssp
phd          : --------E------HHHHHHHHHHHHHHHHHHH-----------------EEEEEE--------EEE---EEEEEEE--EEEEEEEEE-------------HHHH---------HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHH-HHHHHHHHHHHH---------------- :phd
pred         : --------EEE-----HHHHHHHHHHHHHHHHHHHH----------------EEEEE-------EEE----EEEEEE-------EEEEE------------HHHHH----------HHHHHHHHHHHHHH-------HHHHHHHHHHHH---HHHHHHHHHHH---------------- :pred
zpred        : -----EEEEEE---HHHHHHHHHHHHHHH----------------EEEE-HEEEEEE------EEEEEHHHEEEEEH------EEEEEEE------------EHHHH---EEE--HHHHHHHHHHEEEEE-------HHHHHEEEEEHHHHHHHHHHHHHHHH---------------- :zpred


access       : EEEEEB-BBBBEE-EE-BEB-BEBBEBBEEBBEBB-EEBEEBBBBE-BEEEBEBBBBBBEE-BBEBBBEEBBBBBBBEEBEBBBBBBBBBBBBB-EEEEEEBBBEBBEBBBBBBBEEBBBBBEBBBBBB-E-EEEEEEEEBEBEBBBEEBBBEEBEEEBEE-BEEEB-EBEE-E--EEE : access

PHD Rel      : 97754541114798402466788999999997625678787313333476238999726998544132153369998288156689998384434368822112211444424532279999999999886503683257778786775316789999999955243447787646889 : PHD Rel
Pred Rel     : 00089976995809700789999999999088876068988877760877655999009999966667778668997999877779906799988989966578558888667787688899997777777999777877889979886666589999999866978900098888000 : Predator Rel


dssp         : -----E---EE------HHHHHHHHHHHHHHHHHH----------------E-EEEE---E----HHH--EEEEEEEE--EEEEEEEEE--E------------E--EEEEEEEHHHHHHHHHHHHHHHHHH----------HHHHHHHH-HHHHHHHHHHHH----E--------E-- :dssp
define       : -----EEEEEEE--------HHHHHHHHHHHHHHHH-------------EEEEEEEEE------------EEEEEEE--EEEE-EEEEEEEEEE--------EEEEEEEEEEEEE-HHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHEEEEEE---EEEEEE :define
stride       : -----E---EE------HHHHHHHHHHHHHHHHHH----------------E-EEEE---E----HHH--EEEEEEEE--EEEEEEEEE--E---E--E-----E--EEEEEEEHHHHHHHHHHHHHHHHHH----------HHHHHHHH-HHHHHHHHHHHH----E--------E-- :stride


Q3 values for 1gep-2-AS  View SS in Rasmol

	dssp	define	stride
phd	81.01	66.48	79.89
dsc	69.27	61.45	68.16
pred	75.98	65.36	74.86
mul	73.18	61.45	72.07
nnssp	79.33	66.48	78.21
zpred	64.25	55.87	63.13
cons	78.77	64.80	77.65