Results for 1gep-3-AS


1gep-3-AS    : AVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD : MBHRDED
MBHRDED      : DIAEKGAAIGLCVRVKICPGTTFCKRGKQDSVGLGLKLDEKYHGMQPSKFKMGVSGCQNSCSEPMIKDIGLMGTAKG.FTLSVGGSAPRPRLGSVVAKDLTEEQALDLVERIIDFYKKYPKP.RRLGEVIDEIGLEKFKEEVG..... : MTCY25329
MTCY25329    : RFTPYRRNLMACSGIEFCKLSFAETRVRAQHLVPELERRLEDINSQDVPITVNINGCPNSCARIQIADIGFKGDGHGGFQVHLGGHLDAGFGRKLRQHKVTSDELGDYIDRVVRNFVKHRSEGERFAQWVIRAEEDDL.......... : YJ9F_YEAST
YJ9F_YEAST   : RLTGNRLSSSSCVGLPTCGLAFAESERFLPDIITQLEDCLEEYGLRHDSIIMRMTGCPNGCSRPWLGELALVGKAPHTYNLMLGGGYLGQRLNKLYKANVKDEEIVDYIKPLFKRYALEREEGEHFGDFCIRVGIIKPTTEGKYFHED : CYSI_THIRO
CYSI_THIRO   : RITPNRLNGMSCVALPTCPLAMAEAERYYPDFLAQVERLTRKHGLAEQEIVTRMTGCPNGCARPYLAELALVGKGPGRYNLMLGGNGRRYRLNRLYRENLDEAAILAEIDTLLGRYAACRQPGERFGDYLIRDGIVRPVVNPAEDFH. : S71437
S71437       : RITPNNQTAMACPAFPLCPLAITEAERGIPSILKRVRAMFEKVGLDDESVVIRVTGCPNGCARPYMAELGLVGDGPNSYQVWLGGTPNLTQIARSFMDKVKVHDLEKVCEPLFYHWKLERQTKESFGEYTTRMGFEKLKELIDTYKGV : SIR_SYNP7
SIR_SYNP7    : LLTGSQRYAMACPALPTCGLAITESERALPGLLVRIRRLLEEQGLPDEHFVVRMTGCPNGCARPYMAELAFVGSAPNTYQLWLGGSPDQTRLARPFIDRLADGDVETQLRPLFVFFKQSRQAGESFGDFCDRVGFDALRQFSESYQHE : S74718
S74718       : RLTANVRYSMACPALPTCGLAVTESERIMPSVNARLRDLLNSLDLPNESIVTRMTGCPNGCARPYMAEIGFVGSAPNSYQVWLGGSPNQERLAAAYTEKMPLEQLESLFEPLFVYFKQSRKGKESFGDFCHRVGFTALREFSHGYTAP : S74718

             : 423-------433-------443-------453-------463-------473-------483-------493-------503-------513-------523-------533-------543-------553-------563----- :
OrigSeq      : AVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD :OrigSeq
cons         : --------------------HHHHHHHHHHHHHHHHHHHHHH------EEEEEE--------HHHHHHHHH-------EEEEE-----HHHHHHHHHH---HHHHHHHHHHHHHHHHH----------EEEE---------------- :cons
dsc          : --------------------HHHHHHHHHHHHHHHHHHHHHH-------EEEEE------------HHEEE-------EEEEE-----HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH--HHHHH-------HH------- :dsc
mul          : --------------------HHHH-------HHHHHHHHHHHH-----HEEEEE-----------HHHHHHH-------EEE---------HHHHHHHHHHHHHHHHHHHHHHHHHH-----------HH-H--HHHH---------- :mul
nnssp        : ---------------------HHHHHHHHHHHHHHHHHHHHH-------EEEEE-------------------------EEEE------HHHHHHHHH---HHHHHHHHHHHHHHHHH------------------------------ :nnssp
phd          : --------------------HHHHHHH--HHHHHHHHHHHHHH-----EEEEEE--------HHHHHHHHHHE-----EEEEE-----HHHHHHHHHH---HHHHHHHHHHHHHHHHH----------EEEEE-EEE----------- :phd
pred         : -------------------HHHHHHHHHH-HHHHHHHHHHHH------EEEEEE--------HHHHHHHH--------EEEE--------HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH--------------------------- :pred
zpred        : EEE------EEEEEEEEEEHHHHHHHH----HEHHHHHHHH-----HHHEEEEE-------EEEEHHHHEEE------EEEEE------EEEE-----HHHHHHHHHHHHHHHHHHH---------HHHHHHH--------------- :zpred


access       : EBEEE-EBBBBBBBBBBBEBBBBEBEE-BEEBBBEBEEBBEEBE-EEEBBBB-BEBBEEEBB-BBBBEBBBBBEBEEEBBBBBEEE-E-E-BBEBBEEEBEEEEB-EBBEEBBE-BEEEEEEEEEBBEBBB-BBBEEBEE-BEE-EEE : access

PHD Rel      : 9985664356212656675313343212137999999999981889870799741697724526998643211589835986469852235677877404525799999999976531234344333122322222211156555799 : PHD Rel
Pred Rel     : 0077778767777899987687997686776888899999977999986680967900099857677656667899977889799999967868887777866878886888888887778777977655555660898999099000 : Predator Rel


dssp         : ---HHHH-EEE-----------------HHHHHHHHHHHHHH---------EEEE--------HHH--EEEEEEE--EEEEEE----------EEEEEEEEHHHHHHHHHHHHHHHHHH------HHHHHHH---------HHHH--- :dssp
define       : EEEHHHHHH-------------------HHHHHHHHHHHHHHHH--------EEEE-------------EEEEE----EEEEEEE----EEEEEE-----HHHHHHHHHHHHHHHHHHH-----HHHHHHHHHH-EEEE--------- :define
stride       : ---HHHHHEEE----------------HHHHHHHHHHHHHHHH--------EEEE--------HHH--EEEEEEE--EEEEEE--------E-EEEEEEEEHHHHHHHHHHHHHHHHHH------HHHHHHHH-----E--------- :stride


Q3 values for 1gep-3-AS  View SS in Rasmol

	dssp	define	stride
phd	60.14	58.11	61.49
dsc	62.16	59.46	62.84
pred	61.49	52.70	62.16
mul	61.49	58.78	62.16
nnssp	64.19	62.16	64.86
zpred	55.41	56.76	56.76
cons	62.84	56.08	63.51