Results for 1gog-1-AS.1


1gog-1-AS.1    : ASAPIGSAISRNNWAVTCDSAQSGNECNKAIDGNKDTFWHTFYGANGDPKPPHTYTIDMKTTQNVNGLSMLPRQDGNQNGWIGRHEVYLSSDGTNWGSPVASGSWFADSTTKYSNFETRPARYVRLVAITEANGQPWTSIAEINVFQASSYTA : NANH_CLOSE
NANH_CLOSE     : ADIKENVYINQYSEGNRSASATSALTPEKAIDGNTSTLWHTPWAGVDIQINPQSLTLKLGKTRNISSICVTPRQE.GTNGMITDYKIYSGDD......VIAEGKWKSDSSDKYVVFDPISTDNIRIEAISTVGNNKHASIAEVEVYELADTPV : NANH_MICVI
NANH_MICVI     : ITVPAGTTPGRYRVGATLDSEETAREASNVIDGNPSTFWHTEWSRADAPGYPHRISLDLGGTHTISGLQYTRRQN.SANEQVADYEIYTSLNGTTWDGPVASGRFTTSLAPQRAVFPARDARYIRLVALSEQTGHKYAAVAELEVEGQ..... : CELRABGDI

               : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151 :
OrigSeq        : ASAPIGSAISRNNWAVTCDSAQSGNECNKAIDGNKDTFWHTFYGANGDPKPPHTYTIDMKTTQNVNGLSMLPRQDGNQNGWIGRHEVYLSSDGTNWGSPVASGSWFADSTTKYSNFETRPARYVRLVAITEANGQPWTSIAEINVFQASSYTA :OrigSeq
cons           : ----------------------------H--------EEEE------------EEEEE----EEEEEEEEE----------EEEEEEEEE------------EEEE------EEEE------EEEEEEEE--------EEEEEEEEE------ :cons
dsc            : ----------EEEEEEEE----------EEE------EEEEEE----------EEEEEE---EEEEEEEEE---------EEEEEEEEEE--------EEEEEEEEE-----EEEE-------EEEEEEE--------EEEEEEEE------- :dsc
mul            : ------------------------------------------------------EEEE----------EE----------------E------------------------------------EEEEHHH--------HHHHHHHHH------ :mul
nnssp          : -------------------------------------EEE-------------EEEEE---------EEE--------------EEEEEE----------------------EEEE------EEEEEEEE--------EEEEEEEEE------ :nnssp
phd            : --------------------------HHH--------EEEE------------EEEEE----EEEEEEEEEE---------EEEEEEEEE------------EEEE------EEEEE-----EEEEEEEEE------EEEEEEEEEEEE---- :phd
pred           : -------------EEEEE-----------------------------------EEEEE------------------------EEEEEEE-----------------------EEE--------EEEEEEE-------HHHHHHHEEE------ :pred
zpred          : EEEE--EEEE----------HHHHHHHHHEE------EEE-------------EEEEEE---EEEEEEEEEE--------EEEEEEEEE----------EE------------EEEE----HEEEEEEEEH------HHHHHHHHHHH----- :zpred


access         : EEBEBBBBBBEB-BBBEBEBEEBBEEBEEBBEEEEEBBBBBBBB-BEBEE-EEEBBBEBEEE-BBBBBBBBBEEEEEEEEBBBEBEBBBEEEEEE-EBBBBEBEB-BE-BEE-BBBEB-EBEBBBBBBBBEBEEEEBBBBBEBEB-EBBE-EE : access

PHD Rel        : 976423212211143224421033331211469998326411346689999955789648621566426862458997440358999983488887883122664224887212473467626999998726996512578888865414699 : PHD Rel
Pred Rel       : 009888665776650008677797999787599999966667799900009090896789989978866788899999987660668687999998888778880698999786778997677777676556799975577956656099000 : Predator Rel


dssp           : ------EE------EEEE---E--E-HHHHH-------EE---HHH------EEEEEEEEEEEEEEEEEEE----------E-EEEEEEE----------EEEE-------EEEEEEEEEEEEEEEEE--E-------EE-EEEEEE------ :dssp
define         : ------EEEE--EEEEEEE------------------EEEEE----EEEEEEEEEEEEE-EEEEEEEEEEEEE-------EEEEEEEE--------------EEEEE--EEEEEEEEEEE--EEEEEE--------EEEEE--EEEE--EEEE :define
stride         : ------EE------EEEE--------HHHH--------EE---HHH------EEEEEEEEEEEEEEEEEEE----------EEEEEEEEE----------EEEE-------EEEEEEEEEEEEEEEEEEEE-------EE-EEEEEE------ :stride


Q3 values for 1gog-1-AS.1  View SS in Rasmol

	dssp	define	stride
phd	75.16	68.63	79.08
dsc	71.24	69.28	74.51
pred	64.05	58.82	67.97
mul	56.21	49.02	57.52
nnssp	70.59	61.44	73.20
zpred	64.05	54.90	66.01
cons	75.16	69.93	79.08