Results for 1gog-2-AS.1


1gog-2-AS.1    : PQPGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTTNHFDAQIFTPNYLYNSNGNLA : SAFBFA
SAFBFA         : PWP.LGRVGAGLLLGLSSGLAVAQPIS.EVGRWSSGKVMFFGEFDEGTQSPRLWDPLANTLTP..IPAPPFNIFCAGHSFLEDGRLLITGGHVDSHVGVPDAIIFNWDNVPDMNDKRWYPNNTTLANGDVLVLSGETDGGLFNELPQRYVAATNSWQNLTTAQRKIPYYP..........HMFLAPNNK..LFFSGPWRSSQWLDPDGTGTWFEAPYSHFG.GRS....YGGHVYFD...GKVLPVGGNP......PTETVELIDLNLP..LPTWAYQTP.MSVARRQHNTTFLPDGKVLVTGGSRLEGFNNAEGAVLFPEVWDPETNVWKKLASNNAYRGYHSSSVLLPDGRVLSAGGGISLATETHAFDSSALTEGYRDRAESNVA : NANH_MICVI

               : 154-------164-------174-------184-------194-------204-------214-------224-------234-------244-------254-------264-------274-------284-------294-------304-------314-------324-------334-------344-------354-------364-------374-------384-------394-------404-------414-------424-------434-------444-------454-------464-------474-------484-------494-------504-------514-------524-------534----- :
OrigSeq        : PQPGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTTNHFDAQIFTPNYLYNSNGNLA :OrigSeq
cons           : -----------EEEE-------------EEEEEEE--E-EE-------EEE---------------------EEE---------EEEEE--------------EE------------------EE----EEEEE------EEE----EEE-----EE------------------------EEEEE-----EEE-------EEEE------EEE------------------EEEEEE---EEEEE-------------EEEEEEE--------EEEE----EEEEE---EEEE----EEEE----E-E-------EE-----------EE------EEEEEEEEEEE----EEE-----EEE------------------------- :cons
dsc            : ----------EEEEE-------------EEEEE----EEEEE-----------------------------EEEE---------EEEEE-----EEEE----EEE-----------------EEE---EEEEEE-----EEEE------------EEE-------------HH--HH-----EEEE----EEEE-----EEEEEEE----EEEE------------------EEEEE----EEEEE-------------EEEEEEE--------EEEE---HHHHHH---EEEE----EEEE----EEE-----------------------------EEEEEEEEEE----EEEE----EEEE------------------------ :dsc
mul            : -----------EEE------HHH--------------------------------------E---E------EE-----------EEE----------------------------------------EEEEE-------EE------------------------------------------H-------E------------------------------------------H-----HHE-----------------EEEEE-------------------------E------EEE-------------------------------------------EEEE--------------------------H------------- :mul
nnssp          : -----------------------------EEEE-------------------------------EEEE----EEE---------EEEEE----------------------------------------EEEE--------------EEE-----EE------------------------EEEE------EE--------EEEE----------------------------EEE------EEE----------------EEEEE--------EEE-----EEE----EEEE-----EEEE--------------EE-----------EE-------EE----EEEE-----EE--------------------------------- :nnssp
phd            : -----------EEEE-----EEE-----EEEEEEEEEE-EE-------EEE---------------------EEE---EE----EEEEE--------------EE------------------EE----EEEEEE-----EEE----EEEE-----------------------------EEEEEE-----EEE-------EEE-------EEE------------------EEEEEE---EEEEE-------------EEEEEEE---------EEE----EEEEE---EEEE----EEEE---EE-EE------EEEE--E------EEE-----EEEEEEEEEEE----EEE-----EEE------------------------- :phd
pred           : -----------------HHHHHHH----EEEEEEE------------EEEE------------EEE------------------EEEEE------EEEE------------------------------EEEE------------------------------------------------EEEE------EEE---------------------------------------EEEEE-EEEEEE---------------EEEEEE--------EEEE---EEEEEE--------------------------------------------------EEEEE--EEEE----------------------EEEE-----EEE------ :pred
zpred          : -------EEEEEEEEE--HHHHEE----EEE--------EE------------------------EEE----EEE---------EEEEEE----EEEEEEEEEE--------EEEE------EE--EEEEEEEE--------------EE--------------EEEEE------------HHHH------EEE-------EE--------EEEE-----------------EEEEH----EEEEE------------HHHEEEEE-------EEEEE-----EEEE---EEE----EEEEEE--------------EEEE---HHHHHHE------EEEEEEEEEEEEEEEEEEE-----EEEEEHHHHHH--------------HH :zpred


access         : EEEEBB-BBBBBBBBBBBBBBBBEEBEEEBBBBBBBEBBBBBEBEEEBEBEEBBEEBBE-B-EEBBEBBEBEBBBBBBBBEEEBEBBBBBE-EBEEBBB-EBBBBBB-EBEEBEBBEB-EEEBEBBEBEBBBBBEE-EEEBBEEBBEBBBBBEEEBEEBEEBEBEBBB-BEEEEB--BEBBBBBBE-EEBBBBBBBEEEBBEBB-EEEEEEBEEBBEE-BEEE-BEEBBBBBBBBBEBBEBEBBBBEE-EE-EEEEBEBBBEBBBBE-EEEBEBBBBBBEEBBBB-E-EBBBBBEEBEBBBEBEEE-EB-EEEEBBBBBBEB--EEEEEBEE-BEEBBB-BBBBBBBBBEEBEBBBEEEBBBBBBBEEBBEBBBBBEE--E-BEEEBE : access

PHD Rel        : 9998765666134411445447626988399997533401115899852322358887522676545763332432403437884999759754555543342216899898785665678843159937999413778613149725763244334344444255632288887532231557746887155516755213405699842111446556789997655572588872453578847899999999842489998378999996257569935877516426606993898637411122478886233111158523224259875478971478852599377179973533123234422334443234447899 : PHD Rel
Pred Rel       : 0000089099900805066550788098690000099999589990005887899998085777066989888799777899990000789897606956909999090999986678889676709999009597999798779878778999906699907787866688887679088886778999869979997666067899997566980099999888897799679558666679000099099990806656000879909990098509066695566600000900799699807898889987070780009998666600090609866767800990068699999999899776686670099680000000 : Predator Rel


dssp           : ------EEEEEEE------EEEE------EEEE---------------EEEEEEE----EEEEEEE----------EEEE-----EEEE-------EEEEE----EEEE--------E--EEEE-----EEEE--E---------EEEEE----EEEEE-----HHH-------HHHH-----EEE-HHH-EEE-----EEEEEE-----EEEEEEE-EE--EE----E--EEEEEE----EEEEE--E------E----EEEEE--------EEEE---------E--EEEE-----EEEE--E-E--------E----EEEE----EEEE-----------EEEEE-----EEEEE------------EEEEEE-HHHE-----E- :dssp
define         : E---EEEEEEEEEEE------------EEEEEE-------------EEEEEEE-----EEEEEEEEE--------EEEE----EEEEEEE----EEEEEEE----EEEEEE-------EEEEEEE--EEEEEEEEE-----EEEEEEEEE----EEEEE-------EEEE------------EEEEE--EEEEEE---EEEEEEEEE---EEEEE--------EEEEEEEEEEE------EEEEEE-------EEEEEEE-EEEEEE---EEEE--------EEEEEEEEE-----EEEEEE--------------EEEEEEEE----EEEEEEEEEE-------------EEEEEEEEE------EEEE-EEEEE---------EEE :define
stride         : ------EEEEEEE------EEEE------EEEEEE-E--E--------EEEEEE------EEEEEE----------EEEE----EEEEE-------EEEEE----EEEE--------E--EEEE-----EEEE--E---------EEEEE----EEEE------HHH-------HHHHH---EEEEE---EEEEEE---EEEEEE-----EEEEEEE-EE--EE----E--EEEEEEHHH-EEEEE--E-----EE----EEEEE--------EEEE---------E--EEEE-----EEEE--E-EE-------E----EEEEHHH-EEEE-----------EEEEE-----EEEEE------------EEEEEE-HHHE-----E- :stride


Q3 values for 1gog-2-AS.1  View SS in Rasmol

	dssp	define	stride
phd	63.92	55.15	63.92
dsc	63.92	54.12	63.14
pred	64.43	51.80	63.66
mul	62.63	50.26	59.28
nnssp	68.30	56.44	65.98
zpred	58.51	53.61	57.99
cons	65.46	56.70	64.95