Results for 1gp1a


1gp1a        : RTVYAFSARPLAGGEPFNLSSLRGKVLLIENVASLGTTVRDYTQMNDLQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNCLKYVRPGGGFEPNFMLFEKCEVNGEKAHPLFAFLREVLPTPSDDATALMTDPKFITWSPVCRNDVSWNFEKFLVGPDGVPVRRYSRRFLTIDIEPDIETLLS : GSHE_MACFA
GSHE_MACFA   : GTIYDYEAIALNKNEYVPFKQYVGKHILFVNVATYCGLTAQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPNFQLFEKGDVNGEKEQKVFSFLKHSCPHPS....EILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLK : CEC11E41
CEC11E41     : QSIFDFQIETLQG.EYTDLSQYRGKVILLVNVATFCAYTQQYTDFNPMLEKYQAQGLTLVAFPCNQFYLQEPAENHELMNGLTYVRPGNGWTPELHIYGKIDVNGDNHHPLYEFVKESCPQTVD....KIGKTDELMYNPVRPSDITWNFEKFLIDRNGQPRFRFHPTAWSHVVTPFIEQLLA : GSHC_RAT
GSHC_RAT     : STVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLCTTTRDYTEMNDLQKRLGPRGLVVLGFPCNQFGHQENGKNEEILNSLKYVRPGGGFEPNFTLFEKCEVNGEKAHPLFTFLRNALPAPSDDPTALMTDPKYIIWSPVCRNDISWNFEKFLVGPDGVPVRRYSRRFRTIDIEPDIEALLS : GSHP_BOVIN
GSHP_BOVIN   : GTIYEYGALTIDGEEYIPFKQYAGKYILFVNVASYCGLTGQYVELNALQEELEPFGLVILGFPCNQFGKQEPGENSEILATLKYVRPGGGFTPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTS....ELLGSPDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWYHRTTVNSVKMDILTYMR : GSHH_HUMAN
GSHH_HUMAN   : RSMHEFSAKDIDG.HMVNLDKYRGFVCIVTNVASQCKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNV......KFDMFSKICVNGDDAHPLWKWMKIQ.PKGKG....ILGN............AIKWNFTKFLIDKNGCVVKRYGPMEEP.VIEKDLPHYF. : GSHU_WUCBA
GSHU_WUCBA   : QTVYDFHAQMLNG.AQRSLTEYRNKVLLIVNVATYCAYTMQYRDFNPILGSNSNGTLNILGFPCNQFYLQEPAENHELLNGLKYVRPGHGWEPNMHIFGKLEVNGENDHPLYKFLKERCPPTVP....VIGKRHQLIYDPIGTNDVIWNFEKFLVDKKGRPRYRFHPENWVQAVKPYIDELER : B40464
B40464       : GTVYEYGANTLDGGEYVQFQQYAGKHILFVNVASFCGLTATYPELNTLQEELRPFNVSVLGFPCNQFGKQEPGKNSEILLGLKYVRPGGGFVPNFQLFEKGDVNGDNEQKVFSFLKSSCPPTS....ELLGSPEHLFWDPMKVHDIRWNFEKFLVGPDGAPVMRWFHQTPVRVVQSDIMEYLN : GSHG_HUMAN
GSHG_HUMAN   : KSFYDLSAISLDG.EKVDFNTFRGRAVLIENVRSLCTTTRDFTQLNELQCRF.PRRLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDKLPYPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKRLLK : MCU6031565
MCU6031565   : RSVYAFSARPITGGEPVSLGFLRGRVLLIENVASLXSTVREYTQMNELQRRLGARGLVVLGFPCNQFGHQENAQNAEILPSLKHVRPGNGFEPNFMLFEKCEVNGARAHPLFAFLREALPAPSDDMSTLVSDPQLIAWSPVCRNDVAWNFEKFLVGADGTPVRRYSHRCQTLAVEPDIEALLP : GSHU_DIRIM
GSHU_DIRIM   : QTIYDFHVPTLDG.SEKSLAEYRGKVLLLVNVATYCAYTFQYNDFNPMLENNSNGTLKILAFPCNQFLLQEPAENHELLNGLKYVRPGNGWEPNMHIFGKVEVNGDDHHPLYKFLKEHCPQTVP....IIGDRHQLMYNPIGTNDIIWNFEKFLIDKKGHPRYRFHPSAWVQVIAPFIDELER : PFGPXGN
PFGPXGN      : QSIYDYEVKDLSG.SNVSMSKFKNKVLIIFNSASKCLTKNHVEQFNKLHEKYNARGLEILAFPTSQFLNQEFDNTKDICTFNEKNKI......KYNMFSPIEVNGDNTHPLFKYLKKNCDSMHD....ENGT..........LKSIGWNFGKFLVDKNGEVVNYFSPKTNP.DLEKIIIQLLQ : GPXA_NEIME
GPXA_NEIME   : MGIYDFQMKDAEG.NAVDLSGYRGKVLLIVNTATRCGLTPQYEALQKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFG......KFKIFDKIEVNGANTAPLYAYLKSVKPQDKG...NHLFKDFVLKLAALGEGDIKWNFTKFLVNRDGEVVERFAPSVTP.EIEADIRALL. : D9091381
D9091381     : NTIYGFSANALDG.SPVALRDFEGKVLLIVNTASQCGFTPQYQGLQALYNRFGDRGFTVLGFPCNQFGQQEPGGSGEIKNFCETRYG......TFPLFEKVEVNGPNAHPLFKFLTAASPGMAI...PFLGG..........AEDIKWNFTKFLVDRQGKVVKRYGSIAKP.EIAADIEKLL. : BTUE_ECOLI
BTUE_ECOLI   : DSILTTVVKDIDG.EVTTLEKFAGNVLLIVNVASKCGLTPQYEQLENIQKAWVDRGFMVLGFPCNQFLEQEPGSDEEIKTYCTTTWG......TFPMFSKIEVNGEGRHPLYQKLIAAAPTAVA...PEESGFYARMVSKGRPDDILWNFEKFLVGRDGKVIQRFSPDMTPEPIVMESIKLAL : KGUA_HAEIN

             : 10--------20--------30--------40--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191 :
OrigSeq      : RTVYAFSARPLAGGEPFNLSSLRGKVLLIENVASLGTTVRDYTQMNDLQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNCLKYVRPGGGFEPNFMLFEKCEVNGEKAHPLFAFLREVLPTPSDDATALMTDPKFITWSPVCRNDVSWNFEKFLVGPDGVPVRRYSRRFLTIDIEPDIETLLS :OrigSeq
cons         : --EEEEEE-----------------EEEEEE----------HHHHHHHHHHH----EEEEE--------------HHHH---EE----------EEEE-EEE-------HHHHHHHH----------------------------HHHHHHHHEE-----EEEEE----------HHHHHH-- :cons
dsc          : ---EEEEE---------HHHH---EEEEEE-----------HHHHHHHHHHH----EEEE---------------HHHHHHHH-----------EEEE-EEE-------HHHHHHH-----------------------------HHHHHHHH----------HH----------HHHHH--- :dsc
mul          : -EEEEE------------H-----EEEEEE-------E-----HHHHHHHH-----EEEE----------------HHHH-EEEE---------HHHHHH---------HHHHHHHH-----------HH-----EEE----------HHHH-HH------EE----------EHHHHHHHH- :mul
nnssp        : --EEEE-------------------EEEEEE----------HHHHHHHHHH-----EEEEE----------------------------------EE-------------HHHHHHH-----------------------------------EEE---------------------HHHHHHH :nnssp
phd          : --EEEEEEE----------------EEEEEE-----------HHHHHHHHHH----EEEEE--------------HHHH---EEEE--------EEEEEEEEE------HHHHHHHH-----------------EEEE------HHHHHHHHHHH-----EEEEE--------HHHHHHHH-- :phd
pred         : ------------------------EEEEEEEE---------HHHHHHHHHHHH---EEEEE--------------------EEE-------------------------HHHHHHHH----------------------------------EEEE-----EEEEE------------------ :pred
zpred        : EEEEEEEE---------EHHHHH-EEEEEEEEE---EE------HHHHH------EEEEEEEE-----------HHHHHHHEEEEE--------HHHHHHHHHHH----HHHHHH-------------------------------HHHHHEEEE-----EEEEE--------EHHHHHHHHH :zpred


access       : EEBBBBBBEBBEEEEBBBBEEBEBEBBBBBBBBBBBBBEEEBEEBEEB-EEBEEEBBBBBBBEB-EB-EEEEEEEEEBBEBBEBB-EEEE--B-BEBBBEBEBEEEEE-EBBEBBEEEBEEEEEEBBEBBBEEEBBBBBEB-BEEBB-EBEEBBBEEEE-BBB-BBEEBBBEBBEBBBEEBBE : access

PHD Rel      : 916774453058986321111367289999713344133343147899887267834898146666776888885122133214418999665113667655278886556542321278999997655589632444788742226888888625789716433477864431577887249 : PHD Rel
Pred Rel     : 006556778878998775556576599906566887866560876778888787886999688998878778087757588576009999899967766667899908778877788809999999776769986667999997655777559679999876860977777666688855000 : Predator Rel


dssp         : --HHH-EE-E------EEHHHH---EEEEEEE-----HHHHHHHHHHHHHHHHHH-EEEEEEE-----------HHHHHHHHHH-----------EEE---E-----E-HHHHHHHHH--------------HHH----------------EEEE-----EEEEE-----HHHHHHHHHHHH- :dssp
define       : --------------EEEEE----EEEEE-EEEEEE---------------------------------------------------------------------------------------------------------------------------------------------------- :define
stride       : ------EE-E------EEHHHH---EEEEEEE----HHHHHHHHHHHHHHHHHHH-EEEEEEE-----------HHHHHHHHHHH----------EEE-----------HHHHHHHHH--------------HHH---------------EEEEE-----EEEEE-----HHHHHHHHHHHH- :stride


Q3 values for 1gp1a  View SS in Rasmol

	dssp	define	stride
phd	67.76	52.46	67.21
dsc	70.49	61.20	69.95
pred	71.58	74.32	72.68
mul	63.39	59.56	63.93
nnssp	69.95	72.68	69.40
zpred	67.76	51.91	68.31
cons	73.22	58.47	72.13