Results for 1gpc-1-AS


1gpc-1-AS    : GFSSEDKGEWKLKLDNAGNGQAVIRFLPSKNDEQAPFAILVNHGFKKNGKWYIETCSSTHGDYDSCPVCQYISKNDLYNTDNKEYSLVKRKTSYWANILVVKDPAAPENEGKVFKYRFGKKIWDKINAMIAVDVEMGETPVDVTCPWEGANFVLKVKQVSGFSNYDESKFLNQSAIPNIDDESFQKELFEQMVDLSEMTSKDKFKSFEELNTKFGQVM : VHED_BPT4
VHED_BPT4    : GFSSEDKGEWKLKLDNAGNGQAVIRFLPSKNDEQAPFAILVNHGFKKNGKWYIETCSSTHGDYDSCPVCQYISKNDLYNTDNKEYSLVKRKTSYWANILVVKDPAAPENEGKVFKYRFGKKIWDKINAMIAVDVEMGETPVDVTCPWEGANFVLKVKQVSGFSNYDESKFLNQSAIPNIDDESFQKELFEQMVDLSEMTSKDKFKSFEELNTKFGQVM : VHED_BPT6
VHED_BPT6    : GFSSEDKGEWKLKLDNAGNGQAVIRFLPSKNDEQAPFAILVNHGFKKNGKWYIETCSSTHGDYDSCPVCQYISKNDLYNTDNKEYSLVKRKTSYWANILVVKDPAAPENEGKVFKYRFGKKIWDKINAMIAVDVEMGETPVDVTCPWEGANFVLKVKQVSGFSNYDESKFLNQSAIPNIDDESFQKELFEQMVDLSEMTSKDKFKSFEELSTKFSQVM : VHED_BPT2
VHED_BPT2    : GFSSEDKGEWKLKLDNAGNGQAVIRFLPSKNDEQAPFAILVNHGFKKNGKWYIENCSSTHGDYDSCPVCQYISKNDLYNTDNKEYGLVKRKTSYWANILVVKDPAAPENEGKVFKYRFGKKIWDKINAMIAVDVEMGETPVDVTCPWEGANFVLKVKQVSGFSNYDESKFLNQSAIPNIDDESFQKELFEQMVDLSEMTSKDKFKSFEELSTKFSQVM : PLAP_MOUSE

             : 22--------32--------42--------52--------62--------72--------82--------92--------102-------112-------122-------132-------142-------152-------162-------172-------182-------192-------202-------212-------222-------232----- :
OrigSeq      : GFSSEDKGEWKLKLDNAGNGQAVIRFLPSKNDEQAPFAILVNHGFKKNGKWYIETCSSTHGDYDSCPVCQYISKNDLYNTDNKEYSLVKRKTSYWANILVVKDPAAPENEGKVFKYRFGKKIWDKINAMIAVDVEMGETPVDVTCPWEGANFVLKVKQVSGFSNYDESKFLNQSAIPNIDDESFQKELFEQMVDLSEMTSKDKFKSFEELNTKFGQVM :OrigSeq
cons         : ---------EEEEE-------EEEEE----------EEEEEE--------EEEEE-------------EEEEE-----------EEEEEE----EEEEEEEE----------EEEEE---HHHHHHHHHEEEEEE------EEE-------EEEEEEEE----------------------HHHHHHHHHHHHHHHH------HHHHHHHH----E-- :cons
dsc          : ---------EEEEE-------EEEEEE---------EEEEEE--------EEEEEE------------EEEE------------EEEE------EEEEEEE----------EEEEEE---HHHHHHEEEEEEEEE------EEE-------EEEEEEEE----------------------HHHHHHHHHHHHHHHH----------HH--------- :dsc
mul          : ---------HHHH---------------------H-----HHH--------EEE-------------EEEEEE-----------HHHHH------EEEEEEE---H-----HHHHHHH-HHHHHHHHHHHHH--H-----EEEEE----------E------------HHHH------------HHHHHHHHHHHHHH-----HHHHHHHH-H----- :mul
nnssp        : ---------EEEEE-------EEEEE----------EEEEE---------EEEEE-------------EEEE------------EEEE-----EEEEEEEE-----------EEEEE---HHHHHHHHHHHEE-------EEEE-------EEEEEE------------------------HHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH :nnssp
phd          : --------EEEEEE-------EEEEE----------EEEEEE--------EEEEE-------------EEEEE-----------EEEEEE----EEEEEEEE----------EEEEE----HHHHHHHHEEEEEE----------------EEEEEEEEE-----HHHHHH----------HHHHHHHHHHHHHHHH-----HHHHHHHHH----E-- :phd
pred         : ----------EEEE------EEEEEEE--------EEEEEEE-------EEEEEEE------------EEEEE-----------EEEEEEEEE-EEEEEEEE---------EEEEEEEHHHHHHHHHHHHHHHHH---EEEEEE-------EEEEEEE-----------------------HHHHHHHHHHHHHHHHH------HHHHH--------- :pred
zpred        : ----HHHHHHHHHH------EEEEEE------HHHHHHHHHHH-------EEEE-----------EEEEEEEE---------HHHHHHHEE---HEEEEEEE---HHHHHHHHHHHH---HHHHHHHHHHHHHHHH-----EEEE--HHHHHHHHEEEEEEE-----HHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE :zpred


access       : E-EEEEEEEBEBEBEEEEEBEBBBEBBEEEEEEEBBBBBBBEEBBEEEBEBBBEBBBEE-EE-EBBBBBEBBBEEEB-EEEEEE-BBBEEEEB-BBBBBBBEEEE-EEEEEEBBE--BBEEBBEEBBBBBBBBBEBEE--BEBBBEBEBBEBBBEBEEBBEBEE-EEBEBBBEEBBEEBEEEEBEEEBBEEBBEBBEB-BEEEBEBBEEBBEEBBEBB : access

PHD Rel      : 99985543167875247886099996248894335268878446521892699874446899998872599973554779995145875124314599989535787766627887444424897843257787257797641243213436899999742457035564202356797847899999999851453135112457878741321119 : PHD Rel
Pred Rel     : 00990077007000007990690090880900006500009079909097890087999999990998788889999789907708790650005060006799099007008770577757858800700967750090770799988750979078689988977966557608890007899999999989458576099687688997667000 : Predator Rel


dssp         : ----HHH-E----------EEEEEEE-----------EEEEEEEEEE--EEEEEE-HHHH------HHHHHHHH--HHHH-HHHHHHH--EEEEEEEEEEEE----HHH---EEEEEE-HHHHHHHH------HHH------------E--EEEEEEEE--EEE----EE---E-------HHHHHHHHHH---HHHHH-------HHHHHHHHHHH- :dssp
define       : -------EEEEEEEE------EEEEEEEE------EEEEEEEEE----EEEEEEE----------HHHHHHHHHHH----HHHHHHHHEEEEEEEEEEE--------------EEEEEHHHHHHHHHHH-------EEEEEE-----EEEEEEEEEEE---EEEE---EEEE--------HHHHHHHHHHHH-HHHHHH------HHHHHHHHHHHHH :define
stride       : ----HHH-E----------EEEEEEE----------EEEEEEEEEEE--EEEEEE-HHHH------HHHHHHHHH-HHHH-HHHHHHH--EEEEEEEEEEEE----HHH--EEEEEEE-HHHHHHHHHHH---HHH---------------EEEEEEEE--EEE----EE-----------HHHHHHHHHH---HHHHH-------HHHHHHHHHHH- :stride


Q3 values for 1gpc-1-AS  View SS in Rasmol

	dssp	define	stride
phd	59.63	61.47	61.01
dsc	59.63	60.09	61.01
pred	61.47	67.43	64.22
mul	50.46	50.92	51.83
nnssp	62.84	67.89	64.68
zpred	53.21	49.54	54.59
cons	61.01	63.30	62.39