Results for 1gpmd-5-AS


1gpmd-5-AS    : TPAKIIDDAVARIREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDMFGDHFGLNIVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGTIYPDVIEMKMGLVEPLKELFKDEVRKIGLELGLPYDMLYRHPFPGPGLGV : MTCY7832
MTCY7832      : TPANIANALIEQVRTQIGDGHAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGERAQVQRDFVAATGANLVTVDAAETFLEALSGVSAPEGKRKIIGRQFIRAFEGAVRDVLDAEFLVQGTLYPDVVESGFTLVEPLRLLFKDEVRAVGRELGLPEEIVARQPFPGPGLGI : GUAA_YEAST
GUAA_YEAST    : TMENFIDTEINRIRKLVGTAEVIGAVSGGVDSTVASKLMTEAIGDRFHAILVDNGVLRLNEAANVKKTLVEGLGINLMVVDASEEFLSKLKGVTDPEKKRKIIGNTFIHVFEREAEKIKPIQFLLQGTLYPDVIESILKLIEPLRELFKDEVRHLGELLGIPHDLVWRHPFPGPGIAI : GUAA_SYNY3
GUAA_SYNY3    : TTAAFIEESIREVRSQVGDRRVLLALSGGVDSSTLAFLLHRAIGDNLTCMFIDQGFMRKGEPERLVELFDHQFHIPVQYVNARDRFLKQLEGVTDPEEKRRLIGHEFIQVFEEESNRLGPFDYLAQGTLYPDVIESAFKLVEPLRKLFKDEVRKLGRSIGLPEEIVRRHPFPGPGLAI : GUAA_BORBU
GUAA_BORBU    : SLEGNLETIVKKIKLKVGSKKVILGLSGGTDSLVCALLIKKAINENLICVFVNTGLLRKNENK.KILELKHQYDLNIKYIDASTKFLNRLKNISDPEEKRKIIGKEFVDVFEKITLEDQNIEYLAQGTIYSDVIESKLKLLEPLNEFFKDEIIQIGINLGIKKESLYRHPFPGPGLAI : B64441
B64441        : DPKKFIDEAVEEIKQQISDRKAIIALSGGVDSSVAAVLTHKAIGDKLTAVFVDTGLMRKGEREEVEKTFRDKLGLNLIVVDAKDRFLNALKGVTDPEEKRKIIGKLFIDVFEEIAEDIK.AEVLVQGTIAPDWIETQLEVVEPLRELYKDEVRLLAKELGLPDSIVYRQPFPGPGLAV : GUAA_BACSU
GUAA_BACSU    : SMENFIEIEMQKIREQVGDKQVLCGLSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGEREGVMKTFSEGFNMNVIKVDAKDRFLNKLKGVSDPEQKRKIIGNEFIYVFDDEADKLKGIDYLAQGTLYTDIIESGFELIEPLNTLFKDEVRALGTELGIPDEIVWRQPFPGPGLGI : GUAA_HUMAN
GUAA_HUMAN    : TVQNRELECIREIKERVGTSKVLVLLSGGVDSTVCTALLNRALNEQVIAVHIDNGFMRKRESQ.SVEEALKKLGIQVKVINAAHSFYNGTTTLPIPEEKRKIIGDTFVKIANEVIGEMNLEVFLAQGTLRPDLIESAGKVIEPLKDFHKDEVRILGRELGLPEELVSRHPFPGPGLAI : GUAA_CAEEL
GUAA_CAEEL    : TIQNREQSCISEINSIVGDKKVLVMVSGGVDSAVCAALLRRALGNRVTAIHIDNGFMRHEESD.AVEKSLAALDLPIHRYNFGTTFRSSTEHCKDPEMKRKIIGNTFIRVKDVIMKDLNIEYFLAQGTLRPDLIESAGKVVEPLKDFHKDEVRELGKDLGLPESIVQRHPFPGPGLAI : GUAA_DICDI
GUAA_DICDI    : TLDDREQQAITYIKSIVSNKKVLVLVSGGVDSTVCAALISKAIGENVIALHIDNGFMRKDESL.NVEKALSVLGLHLIVVDASQTFYNSTTTIKGPEERRKIIGDTFMRVAENEVKKLGLDVYLAQGTLRPDLIESSGRVVEPLKDYHKDEVRELGKSLGLSDSLVWRQPFPGPGLAI : DNU591121
DNU591121     : FIEIFDEESAQKLRTLNG.......GAGHDYPDVIESLVVKTAKAQVIKSHHNVGGLPEKMNLSLLEPLRMLFKDEVRQLGLALSLPQTMIYRHPPGLGVRILGEVKAEYADLLRQADA.IQALREYDLYDAVSQAFYDFVVALRAVETIDF.MTARWAKLPYDFVSRRIINHVSGIS : G64468
G64468        : LCVKALDKVLGLIMPEKNTNPKDVEHAKMVAENLGIKYIISDIT.DILKAFGAGGYVPTREFDKIADGNLKARIRMCILYYFANKYNLLVAGTSNKSEIYVGYGTKHGDIACDIRPIGN..LFKTEVKKLAKYIGVP.EEELDIKYETLDTILKLYEKGKTPEEI..HKETNIPLETI : GUAA_HAEIN

              : 209-------219-------229-------239-------249-------259-------269-------279-------289-------299-------309-------319-------329-------339-------373-------383-------393-------403----- :
OrigSeq       : TPAKIIDDAVARIREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDMFGDHFGLNIVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGTIYPDVIEMKMGLVEPLKELFKDEVRKIGLELGLPYDMLYRHPFPGPGLGV :OrigSeq
cons          : ---HHHHHHHHHHHHHH---EEEEEE-----HHHHHHHHHHHH---EEEEEEE-------HHHHHHHHHHHHH--EEEEE--HHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH--HHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH-------EE----------- :cons
dsc           : ----HHHHHHHHHHHH----EEEEEE------HHHHHHHHHHH---EEEEEHHHHHHHHHHHHHHHHHHHH-----EEE--HHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH--HHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH-------EE----------- :dsc
mul           : --HHHHHHHHHHHHHHH----EEEE---------HHHHHHHHH---HEEEE------E--HHHHHHHHHHHHH-EEEEEEH---H-HHH---------HHH-HHH-HHHHHHHHHHHHH-HHHHHE-------HHH--HHHHHHHHHHHHHHHHHHHHH----EEEE----------- :mul
nnssp         : -HHHHHHHHHHHHHHHH----EEEEE-----HHHHHHHHHHHH----EEEEE--------HHHHHHHHHHHHH---EEEE---HHHHHHHH------HHHHHHHHHHHHHHHHHHHH---HHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH------EEE---------EE :nnssp
phd           : ---HHHHHHHHHHHHHH---EEEEEE----HHHHHHHHHHHHHHH-EEEEEEE-------HHHHHHHHHHHHH--EEEEEE-HHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH--HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------EE----------- :phd
pred          : ---HHHHHHHHHHHHHH---EEEEEE-----HHHHHHHHHHHH----EEEEE------HHHHHHHHHHHHH----EEEEE---HHHHHHHH------HHHHHHH-----HHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHH------EEEE---------- :pred
zpred         : HHHHHHHHHHHHHHH-----EEEEEEE----EEHHHHHHHHHHHHHEEEEEE------HHHHHHHHHHHHHHHHHEEEEEEHHHHHH--------HHHHHHHEEEEEEHHHHHHHHHHHHHHHHEE---EEEEEHHHHHHHHHHHHHHHHHHHHHHH------HEEEEE-------EE :zpred


access        : EBEEBBEEBBEEBEEEBEEEEBBBBBBEEBEBBBBBBBBBEBBEEEBBBBBBBBBBB-EEEEEEBBEEBBEBBBBBBBBBEBBEEBBEBBEEBEEEEEEEEBBBEBBBEBBEEBBEEBEBBBBBBEBEB-EEBBEBBBEBBEBBEEBBEEEB-EBBEEBEBEEEBBBE-EBEEEE-BE : access

PHD Rel       : 9852689999999998468739987359714799999999996313378897167534632068999999872533677322158777651478948666776435666578987521124455532332589998888778899997999999986559993321022678997689 : PHD Rel
Pred Rel      : 0066678899999998699659907089996878778998987776689986998755588689999886666667687677778778856699900088878665677778888887685666566709660665588808778558988977786550989679700000909000 : Predator Rel


dssp          : -HHHHHHHHHHHHHHHH---EEEEE----HHHHHHHHHHHHHHHHHEEEEEEE-------HHHHHHHHHH-----EEEEEE-HHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH---EEEEE----HHHHH----EEE-------HHHHHHHHHH----HHHH--------HHHH :dssp
define        : HHHHHHHHHHHHHHHHHH-EEEEEEEE-HHHHHHHHHHHHHHH--EEEEEEEE------HHHHHHHHHHH-----EEEEEEHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHH----EEEEE-HHHHHHH--EEEEEE----HHHHHHHHHHHHH-HHHHHHHEEEEE----- :define
stride        : -HHHHHHHHHHHHHHHH---EEEEE----HHHHHHHHHHHHHHHHHEEEEEEE-------HHHHHHHHHHH-----EEEEE-HHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH---EEEEE----HHHHHH---EEE-------HHHHHHHHHHH---HHHHH-------HHHH :stride


Q3 values for 1gpmd-5-AS  View SS in Rasmol

	dssp	define	stride
phd	78.09	67.42	78.09
dsc	68.54	62.92	69.66
pred	67.42	61.24	66.29
mul	65.17	57.87	66.29
nnssp	73.03	64.04	74.16
zpred	63.48	58.99	63.48
cons	75.84	66.85	75.84