Results for 1gym-1-AUTO.1


1gym-1-AUTO.1    : ASSVNELENWSKWMQPIPDSIPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDDNTIVLHHGPLYLYVTLHEFINEAKQFLKDNPSETIIMSLKKEYEDMKGAEDSFSSTFEKKYFVDPIFLKTEGNIKLGDARGKIVLLKRYSGSNEPGGYNNFYWPDNETFTTTVNQNANVTVQDKYKVSYDEKVKSIKDTMDETMNNSEDLNHLYINFTSLSSGGTAWNSPYYYASYINPEIANYIKQKNPARVGWVIQDYINEKWSPLLYQEVIRANKSLI : PLC_LISMO
PLC_LISMO        : GGKAYSLNNWNKWMSALPDTTNLAALSIPGTHDTMSYNGDITLTKPLAQTQTMSLYQQLEAGIRYIDIR...AKDNLNIYH.GPIFLNASLSGVLETITQFLKKNPKETIIMRLKDEQNS.NDSFDYRIQIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLSEN.HTKKPLVIN..SRK....FGMQFGA.PNQVIQDDYNPSVKTKFKEIVQTAYQASK...ADNKLFLNHISATS...LTFTPRQYAAALNNKVEQFVLNLTSEKVRGLG.ILIMDFPEKQTIKNIIKNNKFN. : PLC_STAAU
PLC_STAAU        : AHASDSLSKSPEWMSKLDDGKHLTEINIPGSHDSGSFTLKDPVKSVWAKTQDKDYLTQMKSGVRFFDIRGRASADNMISVHHGMVYLHHELGKFLDDAKYYLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYYYNNPFYTGSNANPTLKETKGKIVLFNRMGGTYIKSGYGADQWADNATFETKINNGLNLKVQDEYKDYYDKKVEAVKNLLLKLKTDS.NKDNVYVNFLSVASGG.SDLSTYNYASHINPEIAKTIKANGKARTGWLIVDYAGYTWPDDIVSEIIDSNK... : S54403
S54403           : AGKAHSIKNSYRWMSALPDNTKLTSLTIPGTHDTMSYKGNITLTKSLAQTQKMSLFQQLEARIRYIDIR...AKEDLQIYH.GPIYLDASLKGVLETTVNFLKEHPKETIIMRLKDENNHKNDRFDYRIQQYKAFFYTTPKSDSSDKFPTLKELRGKILLLLEN.GTNKPLTIN..YSK....FGMKFAA.ENQVIQDNFNPTIKTKYNEIVQTAHQAFKQSSGENKLYLNHVSATS...LTCTPYQYASTLNAKVDQYVTKLTAVGVRGLG.VFIMDFPPKQTIKSVIKNNKFN. : DHE4_UNKP

                 : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------201-------211-------221-------231-------241-------251-------261-------271-------281-------291--- :
OrigSeq          : ASSVNELENWSKWMQPIPDSIPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDDNTIVLHHGPLYLYVTLHEFINEAKQFLKDNPSETIIMSLKKEYEDMKGAEDSFSSTFEKKYFVDPIFLKTEGNIKLGDARGKIVLLKRYSGSNEPGGYNNFYWPDNETFTTTVNQNANVTVQDKYKVSYDEKVKSIKDTMDETMNNSEDLNHLYINFTSLSSGGTAWNSPYYYASYINPEIANYIKQKNPARVGWVIQDYINEKWSPLLYQEVIRANKSLI :OrigSeq
cons             : ------HHHHHHHHH--------EEEE-----------------E---HHHHHHHHHHHH---EEEEE--------EEEE----EEEEE-HHHHHHHHHHHHH-----EEEEEE----------HHHHHHHHHHH----------------------EEEEEE--------------------EEEEE-----EEEE------HHHHHHHHHHHHHHHH-------EEEEEEEE-------------------HHHHHHHHH-------EEEE---------HHHHHHHHH----- :cons
dsc              : ----HHHHHHHHHHH--------EEEE----------------HHHHHHHHHHHHHHHHHHHHHHHEEE------HHEEE----EEEEE--HHHHHHHHHHHH------EEHHHHH---------HHHHHHHHHH---------------------EEEEE-----------------------EEE------EEE----------HHHHHHHHHHHHH-------EEEEEEEE--------------------HHHHHHH------EEEEEE---------HHHHHHHHHH---- :dsc
mul              : -------------HH-------------------------------HHH-----HHHHHHHHHHEEEE---------EE------EHH---HHHHHHHHHHH-----HHHHHHHH-------H-H-EE-HH-HE-EE-------------HH----HHEEEE-----------------------H-------EEEE------HHHHHHHHHHHHHHHHH-------EEEEEE---------------E-------HHH-H--------EEE-EEE--------EEEEE------- :mul
nnssp            : ------HHHHHHHHHH--------EEE-------------------------HHHHHHHH---EEEE---------EEEE----EEEHHHHHHHHHHHHHHHH-----EEEEEE--------HHHHHHHHHHHHH----------------------EEEEE---------------------EEEEE-----EEEE------HHHHHHHHHHHHHHHHH------EEEEEE---------------------HHHHHHHHH-------EEEE---------HHHHHHHHH----E :nnssp
phd              : ----------HHHHH--------EEEE-----------------E---HHHHHHHHHHHH---EEEEE---------EEE----EEEEE-HHHHHHHHHHHHHH----EEEEEE----------HHHHHHHHHHHHE--------------------EEEEEE--------------------EEEEE------EEE------HHHHHHHHHHHHHHHH-------EEEEEEEEE----------HHHHHHHHHHHHHHHHHH------EEEEEEEEE---HHHHHHHHHH----- :phd
pred             : ----------------------EEEEE----------------------HHHHHHHHHHH---EEEE---------EEEEE---EEEEHHHHHHHHHHHHHHH-----EEEEHHHHHH--------HHHHHHHEEE---------------------EEEEEE--------------------EEEE------EEEEE-------HHHHHHHHHHHHHHH------EEEEE-----------------------HHHHHHHH------EEEEE---------HHHHHHHHHHH--- :pred
zpred            : HHHH---------EE------EEEEEEEE------------EEE--HHHHE---HHHHHH--EEEEEE-------HEEEE---EEEEEHHHHHHHHHHHHHH----HHHHHHHHHHHHH-----HHHHHHH------EE----------HHHHHHHHEEEEE---------EE------------EE------EEEEE-----HHHHHHHHHHHHHHH--------HEEEEEEE--------EE--EEEEEE-HHHHHHHH-----EEEEEEEEEE------HHHEEEEH------ :zpred


access           : EEEBEBBEEBBEBBBEBEEEEEBBBBBBEEE-EEBEBEBEEEBEEBBBEEEEBEBBEBBEBBBEBBEBEBEBBEEBBBBBBBBBBBBBBBBEEBBEEBEEBBEE-EEEBBBBEBEEEEEEEEEB-EBBBEBBEEBB-B-EE-EEEEE-EEBEEBEBEBBBBBE-EEEEEEBBBEBB--EEEEEBBBEB-EEBEBBBEEEBEEEBEEEBEEBBEBBEEB-EEEEEEBEBBBBBBBBBEEEEB-BBB-BBBBBBEEEBBEBBEEE-EBEBEBBBBBBBBE-BEEEBBEEBBEBBEE-B : access

PHD Rel          : 99865556431355247799751366344777665211244311112121346699998705447873333357763453159546654133678999999973799369998316778765522378998753321156435777888513247627999818998875667766777886221454169722224166532267889999999995224668833899999974798333321126676648999999975423431266889743782377999988535699 : PHD Rel
Pred Rel         : 00766755667657889999886999688999997777876765688650575589787876697778567678700789099970605567888990978868900750978976867777777767588875555799788999998668676677008068999077887887077996555877997065670666857606777880979896877799778656776667889999098866668876788779989979656807765667089768877796777000 : Predator Rel


dssp             : ---HHHHH-------------EHHH--EEEE--HHHHH---HHHHHHH------HHHHHH----EEEEEEEE-----EEEEE--EEEEEEHHHHHHHHHHHHHH-----EEEEEEE-----------HHHHHHHH------E-------EHHHH---EEEEEE---------E--------EEEEEE-----EEEEEE-----HHHHHHHHHHHHHHHH-------EEEEEE------------HHHHHHHHHHHHHHHHHHH------EEEE----------HHHHHHHHHHH-- :dssp
define           : --HHHHHHH----------------EEEEEE------EEEEHHHHHHEEEE--HHHHHHHHH-EEEEEEEEE---EEEEE---EEEE--HHHHHHHHHHHHHHHH--EEEEEEEEE----------HHHHHHHHHH-------------HHHHHH-EEEEE------EEEEEEEE------EEEEE----EEEEEE------HHHHHHHHHHHHHHHHHHHH---EEEEEEEEEEEE------HHHHHHHHHHHHHHHHHHHHH-EEEEEEEEEE-------HHHHHHHHHHH--- :define
stride           : ---HHHHH-------------EHHH--EEEE----------HHHHHHH------HHHHHH----EEEEEEEE-----EEEEE--EEEEEEHHHHHHHHHHHHHH-----EEEEEEE-----------HHHHHHHHH-----E-------EHHH----EEEEEE---------E---------EEEEE-----EEEEE------HHHHHHHHHHHHHHHHH------EEEEEE------------HHHHHHHHHHHHHHHHHHH------EEEE----------HHHHHHHH----- :stride


Q3 values for 1gym-1-AUTO.1  View SS in Rasmol

	dssp	define	stride
phd	72.64	66.55	76.35
dsc	68.92	65.54	71.28
pred	72.30	63.18	74.32
mul	61.82	55.07	65.88
nnssp	71.28	64.19	75.00
zpred	62.84	61.15	64.53
cons	72.30	64.86	75.34