Results for 1hnf-1-AS


1hnf-1-AS    : TNALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQE : CD2_MOUSE
CD2_MOUSE    : .DNETIWGVLGHGITLNIPNFQMTDDIDEVRWVRR..GTLVAEFKRKKPPFLISETYEVLANGSLKIKKMMRNDSGTYNVMVYGTNGMTRLEKDLDVRILE : CD2_HUMAN
CD2_HUMAN    : TNALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQE : CD2_HORSE
CD2_HORSE    : KKNITILGALERDINLDIPAFQMSEHVEDIQWSKG..KTKIAKFKNGSMTFQKDKTYEVLKNGTLKIKHLERIHEGTYKVDAYDSDGKNVLEETFHLSLLE : CD2_RAT
CD2_RAT      : .DSGTVWGALGHGINLNIPNFQMTDDIDEVRWERG..STLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTNGTRILDKALDLRILE : HPRT_PLAFG

             : 4---------14--------24--------34--------44--------54--------64--------74--------84--------94--------1 :
OrigSeq      : TNALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQE :OrigSeq
cons         : ----HHHHHH---------------HHHHHHHHH---HHHHHHHHHHH---H---HHHHHH---EEEE---------EEEEEE----HHHHHHHHHHH--- :cons
dsc          : ----HHHHHHH--------------HHHHHHHHH---HHHHHHHHHHHHHHHH--HHHHHHH---EEE---------EEEEEE----HHHHHHHHHHH--- :dsc
mul          : --------------EE-----HH-HHHHHHHHH------HHHHHH---H-HHH---HHHHH----HHHHH-------EEEEEE------HHHHHHHHHHHH :mul
nnssp        : HHHHHHHHHH---------------------------HHHHHHHHHHH-------HHHHHH----EE----------EEEEEE----HHHHHHHHHHHHHH :nnssp
phd          : ----EEEE------E---------HHHHHHHHHH---HHHHHHHHH-----E--HHHHHHH---EEEE---------EEEEEE-----HHHHHH------- :phd
pred         : ---------------------------HHHHHH----HHHHHHHHHHHHHHHH---EEEE----EEEEE--------EEEEE------HHHHHHHHHH--- :pred
zpred        : ----EEEEE----EEEEE--EEE--HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE------EEEEEE------HHHHHHHHHHHH :zpred


access       : EEEBEBBBBBBEBBBBEBBBBEBBEEBEEBEBEEEEEEEBBBEBEEEEEEBEEEEBBEBBEEBEBEBEEBEEEEEEBBEBBBBBEEBEEBBEEBBEBEBBE : access

PHD Rel      : 99741221344441114765543214667878624982699876611575212335432115841563123367882799995389721466543411159 : PHD Rel
Pred Rel     : 00777775668897888676900777768775769970660999997067757770585009066888655909996688080899975788087776000 : Predator Rel


dssp         : ---EEEEEE----EEE----------EEEEEEEEHHH--EEEEE-HHH-EEE----EEE-----EEE----HHH-EEEEEEEEE----EEEEEEEEEEEE- :dssp
define       : -EEEEEEE-----EEEEE----------EEEEEE--------------EEEEE---EEEE--EEEEEEE------EEEEEEE--------EEEEEEEEEE- :define
stride       : ---EEEEEE--E-EEE----------EEEEEEEEHHH-EEEEEE-HHH-EEE----EEE-----EEE--E-HHH-EEEEEEEEE----EEEEEEEEEEEE- :stride


Q3 values for 1hnf-1-AS  View SS in Rasmol

	dssp	define	stride
phd	45.54	45.54	43.56
dsc	36.63	33.66	34.65
pred	45.54	49.50	43.56
mul	34.65	39.60	32.67
nnssp	38.61	35.64	36.63
zpred	33.66	37.62	33.66
cons	41.58	36.63	39.60