Results for 1htrp-1-AS


1htrp-1-AS    : AVVKVPLKKFKSIRETMKEKGLLGEFLRTHKYDPAWKYRFGDL : OAU94795
OAU94795      : CIVKMPLRRVKTMRKNPSGKNMMNNFLKEHAYRLSQISFRG.. : I47176
I47176        : GITRVPLRKGKSLRKELKERGLLEDFLQKQPYALSSKYSSFSE : PBASPPRO
PBASPPRO      : ALVRVPLKRVPSIRSQLRSEGLLQEFLKENPDMFGRRYSQC.P : PEPA_HUMAN
PEPA_HUMAN    : IMYKVPLIRKKSLRRTLSERGLLKDFLKKHNLNPARKYFPQTL : PEP3_RABIT
PEP3_RABIT    : IIHKVPLVRKKSLRKNLIEKGLLKDYLKTHTPNLATKYLPKSV : CATE_MOUSE
CATE_MOUSE    : ALHRVPLRRHQSLRKKLRAQGQLSEFWRSHNLDMTRLSESCVY : NRL_2PSG1
NRL_2PSG1     : .LVKVPLVRKKSLRQNLIKDGKLKDFLKTHKHNPASKYFP.LI : PEPC_MACFU
PEPC_MACFU    : AVVKVPLKKFKSIRETMKEKGLLGEFLRTHKYDPAWKYHFGDL : PAG_HORSE
PAG_HORSE     : CLVTIPLVKIKSLRENLREKDMLKEYLEKYPFRLTHKLLHKDS : A60516
A60516        : LPSKIPLRKMKSLRQRLEEEGLXEXKLKXH.HNAGTX...... : CHYM_FELCA
CHYM_FELCA    : EITRVPLHKGKSLRKALKEHGLLEBFDK.....VSNEPLADEY : JT0399
JT0399        : ....IPLYKGNTLRKALKEHGLLGDFLKKHQVELSRKRSHSNE : PL0006
PL0006        : EITRIPLYKGKPLRKALKPXGLLEDFLQG...EVASVPLTNEY : PEPE_CHICK
PEPE_CHICK    : GITRLPLERGKKLREILREKGLLHHFLQHHRYDIGTKFPHAVL : PEPA_BOVIN
PEPA_BOVIN    : SVVKIPLVKKKSLRQNLIENGKLKEFMRTHKYNLGSKYIR.LV : PEPA_CHICK
PEPA_CHICK    : SIHRVPLKKGKSLRKQLKDHGLLEDFLKKHPYNPASKYHP.TE : PEPA_URSTH
PEPA_URSTH    : FIIKVPLVKKKSLRKNLKEHGLLKDFLKKHSPNPASKYFP.VM : PC4360
PC4360        : .LYKVPLVKKKSLRQNLIENGLLKDFLAKHNVNPASKYFPTEL : CATE_RABIT
CATE_RABIT    : TLDRVPLRRQPSLRKKLRAQGQLSEFWKAHKVDMVQYTETCME : OAU94789
OAU94789      : CIVKVPLRRLKTMRKTLSGNNILNNVLKEYPYRLPQISFRD.. : AF036953
AF036953      : CLVTIPLTRVKSMRENLREKDRLKDFLENHPYNLAYKFVDSDL : PEPF_RABIT
PEPF_RABIT    : CLVTIPLMKVKSMRENLRENDILLDYLEKHPYRPTYKLLSGDP : PAG2_PIG
PAG2_PIG      : CLVMIPLTKVKSVRESLREKGLLKNFLKEHPYNMIQNLLSKVQ : PAG1_PIG
PAG1_PIG      : CLVIIPLTKVKSIRENLREKDLLLNFLKEHPYNMIQKFGLKSP : PAG2_BOVIN
PAG2_BOVIN    : CIVILPLKKMKTLRETLREKNLLNNFLEEQAYRLSKN...D.. : OAU94791
OAU94791      : CIVEIPLMKVNVMQETLNEKSLLNNFLKKYPYRLAQNSTRN.. : CATD_BOVIN
CATD_BOVIN    : .VIRIPLHKFTSIRRTMSEAGXVXXLIAKG...PISKYATGEP : S68032
S68032        : .MERIILRKGKSIREAMEEQGVLEKFLKNRKIDPAAKYHFNND : A23457
A23457        : .LVKIPLKKFKSIREIMKEKGLLZBFLRTYKHNPAEKYRFGDF : PC4361
PC4361        : KVTKVTLKKFKSIRENLREQGLLEDFLKTNHYDPAQKYHFGDF : PEPC_PIG
PEPC_PIG      : SVIKVPLKKLKSIRQAMKEKGLLEEFLKTHKYDPAQRYRIGDI : PEPC_RAT
PEPC_RAT      : SLLRVPLRKMKSIRETMKEQGVLKDFLKTHKYDPGQKYHFGDY : B43356
B43356        : TQIKVPLKKIKSIREVLREKGLLGDFLKNHKPQHARKFFRNDF : PEP1_THUTO
PEP1_THUTO    : .LLQVPLEKGQSAREYLQEQGLWEQYRLKYPYNPMAKFDP.SF : PEP2_THUTO
PEP2_THUTO    : .FHKLPLIKGKTAREELQERGLWEDYRKQYPYHPMAKF....Y : PEP3_THUTO
PEP3_THUTO    : ..INVPLTRHKSMRESLREKGIELPYQDPAKYRPEFATANYAD : A39314
A39314        : GIIKVPLKKFKSMREVMRDHGIKAPVVD.....PATKYYNN.F : D88205

              : 1---------11--------21--------31--------41- :
OrigSeq       : AVVKVPLKKFKSIRETMKEKGLLGEFLRTHKYDPAWKYRFGDL :OrigSeq
cons          : --EEE-HHHHHHHHHHHHH--HHHHHHHH-------------- :cons
dsc           : -----HHHHHHHHHHHHHHHHHHHHHHH-------HH------ :dsc
mul           : -EEEEHHHHHHHHHHHHHHHHHHHHHHHH-------------- :mul
nnssp         : EEEEE-HHHHHHHHHHHHH--HHHHHHHH-------------- :nnssp
phd           : --EEE-----HHHHHHHHH--HHHHHHHH-------------- :phd
pred          : --------HHHHHHHHHHH---HHHHHHH-------------- :pred
zpred         : EEEEEHHHHHHHHHHHHHHHHHHHHHHH--------------- :zpred

access        : EBBEBBBEEBEEBEEEBEEEEBBEEBBEE-E-EBBEE-BEEEE : access

PHD Rel       : 9245267862499999974245899996347887633335999 : PHD Rel
Pred Rel      : 0076998867779999098677577888099999999999000 : Predator Rel

dssp          : --EEEEEEE---HHHHHHH---HHHHH------HHHHH----- :dssp
define        : -----------HHHHHHHHHH-HHHHHHHH---HHHHHH---- :define
stride        : --EEEEEEE---HHHHHHHH-HHHHHHH-----HHHHH----- :stride

Q3 values for 1htrp-1-AS  View SS in Rasmol

	dssp	define	stride
phd	67.44	67.44	69.77
dsc	60.47	69.77	67.44
pred	60.47	72.09	58.14
mul	58.14	58.14	65.12
nnssp	60.47	53.49	62.79
zpred	58.14	53.49	65.12
cons	65.12	58.14	67.44