Results for 1hvq-1-AUTO.1


1hvq-1-AUTO.1    : GGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIVSNGIRSCQIQGIKVMLSLGGGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLDGIDFDIEHGSTLYWDDLARYLSAYSKQGKKVYLTAAPQCPFPDRYLGTALNTGLFDYVWVQFYNNPPCQYSSGNINNIINSWNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSSSILDSV : CUSSEQ2
CUSSEQ2          : AGIGIYWGQNGNEGSLASTCATGNYEFVNIAFLSSFGGGQTPVLNLAGHCNPDNNGCTILSNEINSCQSQNVKVLLSIGGGTGSYSLYSADDAKEVANFIWNSYLGGQSDSRPLGDAVLDGVDFDIEFGSDQFWDVLAQELKSFG.....VILSAAPQCPIPDAHLDAAIRTGLFDSVWVQFYNNPSCMYADN.TDDILSSWNQWAA.YPILKLYMGLPAAPEAAPSGFIPVDELISEVLPTIKAYSNYGGVMLWSKAFDN..GYSDAIKDSI : CHIA_PHAAN
CHIA_PHAAN       : GGISVYWGQNGNEGSLADACNTGNYKYVNIAFLFTFGGGQTPQLNLAGHCNPSINNCNVFSDQIKECQSKDIKVLLSLGGASGSYSLTSADDATQVANYIWNNFLGGQSSSRPLGDAILDGVDFDIESGTGEHWDDLARALKGFN....SLLLTAAPQCPIPDAHLDTAIKTGLFDIVWVQFYNNPPCQYSSGNTNDLISSWNQWTS.SQAKQLFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAIIGSV : CHI1_RHIOL
CHI1_RHIOL       : PNVMYYWGQNSAQASLGTYCESGQVDAVLLSFLHVFNVGGTPEINLSSACAGTFPSCPAVGADIKKCQDKGVKVILSLGGAAGVYGFTSDAQGQQFAQTIWNLFG.GSSDTRPFGDAVIDGVDLDIEGGASTGYAAFVNALRQKFSS...FLIGAAPQCPFPDAILGSVLNSASFDYVNVQFYNN.YCSAT..GSSFNFDTWDNWAKPNKNVKIMFTIPGSPTAAGSGYVPMSTLQTIVPSLASEY.SYGGVSVWDAS...NGDFSSQLYSLV : CHIT_YEAST
CHIT_YEAST       : .NIAVYWGQNSAQESLATYCESSDADIFLLSFLNQFPT...LGLNFANACSDTSDHCTQIAEDIETCQSLGKKVLLSLGGASGSYLFSDDSQAETFAQTLWDTFG.TGASERPFDSAVVDGFDFDIENNNEVGYSALATKLRTLFAEG.KYYLSAAPQCPYPDASVGDLLENADIDFAFIQFYNN.YCSVS..G.QFNWDTWLTYAQPNKNIKLFLGLPGSASAAGSGISDTSLLESTIADIASS..SFGGIALWDASQAFGEPYVEILKNLL : CHI1_CANAL
CHI1_CANAL       : .NIAAYWGQNAGQQTLGDYCSSSPASIIILSFLDGFPN...LSLNFANQCSGTSSHCSQIGSDIKSCQQQGKTILLSLGGATGNYGFSSDSEAVQFAGTLWNKFG.GKDSERPFDDAIVDGFDFDIENKDQTGYAALATQLRKYFSTG.KYYLSAAPQCPYPDESVGDLMSQVDLDFAFIQFYNN.YCSLN..Q.QFNWNSWSNYAR..KSIKLYLGLPGSSSSAGSGFVGLSTVQRVVASIKGD..SFGGISIWDIS...GGYLNQLYQALS : CONB_CANEN
CONB_CANEN       : TEIAVYWGQR.EDGLLRDTCKTNNYKIVFISFLDKFGCEIRPELELEGVCGPSGNPCSFLESQIKECQRMGVKVFLALGGPKGTYSACSADYAKDLAEYLHTYFLSERREG.PLGKVALDGIHFDIQKPVELNWDNLLEELYQIKDVYQSFLLSAAPGCLSPDEYLDNAIQTRHFDYIFVRFYNDRSCQYSTGNIQRIRNAWLSWTKYPRDKNLFLELPASQATAPGGYIPPSALIGQVLPYLPDLQRYAGIALWNRQADKETGYSTNIIRYL : SRCHITI1
SRCHITI1         : GGIAIYWGQNNGDGTLTSTCDTGNYEIVVLSFLTTFGCSRTPQWNFAGHCGD.WSPCTKLQPEIQHCQQKGVKVFLSLGGASGSYSLCSPQDAKEVADYLFSNFLTGRYG..PLGSVTLDGIDFDIEGGSNLYWDDLAKELDALRQTN.NFYLSAAPQCPIPDYYLDKAIKTGLFDYVFVQFYNNPPCQYSNGNTGPLLGSWDAWTSVLPNNTVFMGLPASREAAPSGYIPPNVLISEVLPYIKQASNYGGIMLWSRFQDVTNHYSDQIKYYV : CHIA_ARATH
CHIA_ARATH       : GGIAIYWGQNGNEGNLSATCATGRYAYVNVAFLVKFGNGQTPELNLAGHCNPAANTCTHFGSQVKDCQSRGIKVMLSLGGGIGNYSIGSREDAKVIADYLWNNFLGGKSSSRPLGDAVLDGIDFNIELGSPQHWDDLARTLSKFSHRGRKIYLTGAPQCPFPDRLMGSALNTKRFDYVWIQFYNNPPCSYSSGNTQNLFDSWNKWTTSIAAQKFFLGLPAAPEAADSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSSSILASV : S57475
S57475           : GGIAIYWGQNGNEGTLSEACDTGRYTHVNIAFLNKFGNGQTPEMNLAGHCNPATNSCTKFSAQIKYCQSKNIKVLLSIGGGIGTYTLASVEDAGTVSTFLWNTFLGGHSSTRPLGDAELDGIDFDIEQGSTQNYDHLARFLKAYSKKGKKVYLGAAPQCPIPDRFLGTALDTGLFDFVWVQFYNNPPCQYADGNVTNLLNSWKRWTSTVPAGKIFLGLPAPPAAAGSGFVPADVLTSKILPVIKKSRKYGGVMLWSRFFDVQNGYSTSIIGSV : JC4053
JC4053           : GGIAIYWGQNGGEGTLRDTCNSGLYSYVNIGFLSTFGNGQTPQLNLAGHCDPSSGGCKQLSNSIKQCQSQGIKVMLSIGGGGGSYSIASADEGRNVANYLWDNFLGGQSSNRPLGDAILDGIDFDIEQG.TDNYVTLAKTLSQHGQQSGRVYLTAAPQCPFPDHWLNKGLKTGLFDFVWVQFYNNPQCNFDAGNPQGFKDAWNQWTSQIPAQKFFVGLPASRAAAGNGFVPSQTLINQVLPFVKGSGKYGGVMLWDRFNDKNSGYSTRIKGSV : CHIB_TOBAC
CHIB_TOBAC       : GDIVVYWGQDVGEGKLIDTCNSGLYNIVNIAFLSSFGNFQTPKLNLAGHCEPSSGGCQQLTKSIRHCQSIGIKIMLSIGGGTPTYTLSSVDDARQVADYLWNNFLGGQSSFRPLGDAVLDGIDFDIELG.QPHYIALARRLSEHGQQ.GKLYLTAAPQCPFPDKLLNGALQTGLFDYVWVQFYNNPECEFMS.NSENFKRRWNQWTS.IPAKKLYIGLPAAKTAAGNGYIPKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSSAIRGAV : CHIA_CICAR
CHIA_CICAR       : AGIAVYWGQNGNEGSLQDACNTNNYQFVNIAFLSTFGNGQNPQINLAGHCDPSTNGCTKFSPEIQACQAKGIKVLLSLGGGAGSYSLNSAEEATTLANYLWNNFLGGTSTSRPLGDAVLDGIDFDIESGGQ.HYDELAKALNGFS...QQVYLSAAPQCPYPDAHLDSAIQTGLFDYVWVQFYNNPQCQYSNGNINNLVNAWNQWTS.SQAKQVFLGVPASDAAAPSGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFNDAQSGYSNAIKGSV : PSTCHIT
PSTCHIT          : AGIAVYWGQNGGEGSLADTCNTGNYEFVNIAFLSTFGSGQTPQLNLAGHCDPSSNGCTGFSSEIQTCQNRGIKVLLSLGGSAGTYSLNSADDATQLANYLWDNFLGGQSGSRPLGDAVLDGVDFDIESGGSNHYDDLARALNSLSS..QKVYLSAAPQCIIPDQHLDAAIQTGLFDYVWVQFYNNPSCQYSNGGTTNLINSWNQWIT.VPASLVFMGLPASDAAAPSGFVSTDVLTSQVLPVIKQSSKYGGVMLWDRFNDVQTGYSAAIIGSI : CHIE_BETVU
CHIE_BETVU       : SQIVIYWGQNGDEGSLADTCNSGNYGTVILAFVATFGNGQTPALNLAGHCDP.ATNCNSLSSDIKTCQQAGIKVLLSIGGGAGGYSLSSTDDANTFADYLWNTYLGGQSSTRPLGDAVLDGIDFDIESGDGRFWDDLARALAGHNNG.QKVYLSAAPQCPLPDASLSTAIATGLFDYVWVQFYNNPPCQYDT.SADNLLSSWNQWT.TVQANQIFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD..SGYSSAIKSSV : CHIA_TOBAC
CHIA_TOBAC       : GDIVIYWGQNGNEGSLADTCATNNYAIVNIAFLVVFGNGQNPVLNLAGHCDPNAGACTGLSNDIRACQNQGIKVMLSLGGGAGSYFLSSADDARNVANYLWNNYLGGQSNTRPLGDAVLDGIDFDIEGGTTQHWDELAKTLSQFSQ..QRVYLTAAPQCPFPDTWLNGALSTGLFDYVWVQFYNNPPCQYSGGSADNLKNYWNQWN.AIQAGKIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD..NGYSSAIKANV : AB003195
AB003195         : GDIAIYWGQNGNEGTLAQTCATGNYRFVIVAFLPVFGKGQTPVLNLAGHCDPASNGCTGVGADIKSCQSLGIKVMFSIGGGVGNYGLSSRDDAKQVAAYLWNNYLGGTSPSRPLGDAVMDGIDFDIESGGGMYWDDLAKVPQGVLAAGQEGVPDGGATVPFPDASLGVALSTGLFDYVWVQFYNNPPCQYSSSGVGNLASAWKQWT.SIPAGRVFLGLPVAAEAAGSGFVETSDLVSKVLPVVKKSPKYGGIMLWSRYYDGLTGYSDKVKSSV : S82314
S82314           : GNIAVYWGQNGNEGSLADACNSGLYAYVNIAFLTTFGNGQTPVLNLAGHCDPGSGSCTGQSSDIQTCQSLGIKVLLSIGGASGSYGLSSTDDANSVADYLWDNFLGGSGSSRPLGAAVLDGIDFDIENGQSAHYDDLANALKGKG.....VLLTAAPQCPYPDASLGPALQTGQFDNVWIQFYNNPGCAYANGDDTNLVNAWNTWTSSITAGSFILGVPASPQAAGSG.TSTPALTGTVIPAIRGIGNYGGIMVWDRFNDVQNNYSSQVKGSV : S60371
S60371           : KNIAVYWGQNSAQQRLSFYCNDANINVIDIAFLNGITPPMTNFANAGDRCTPFDNQCPEIEADIKTCQANGKTILLSLGGSYTQGGWSSTGAAQSAADQVWAMFGPGSSVHRPFGSAVVDGFDFDFEATT.NNLAAFGAQLKSRTNAAGKYYFSAAPQCFFPDAAVGALINAVPMDWIQIQFYNN.PCGVSGFQNNYNYQTWENWAKPNPNVKLLVGIPAGPG.AGRGYVSGSQLTS.VFQYSKGFSTFAGAMMWDMSQLYNTGFETQVVNAL : CHI3_CANAL
CHI3_CANAL       : .NVAVYWGQNSGQQRLSYYCDSDAVDIVILSFMHQFPSP..IQLNFANACEGTTAQCQTIAEDIKYCQNKGKTILLSLGGAAGSYGFSDDATAKQFAHTLWDLFGNLATNDRPFYDAVLDGFDFDIENNWSTGYPALATELRTLFQKDSKYYLGAAPQCPYPDASVGPLLKQSEIDFVFIQFYNN.YCNLG..SSSFNWDTWLNYAEPNKNIKLFVGVPASSRAAGSGNDPSAVSQYLTSDILNS..YFGGISMWDVSAGWNGNFVENMKAIV : CHI2_CANAL
CHI2_CANAL       : .QVALYWGQNGAQERLAQYCQETDVDIVLLSFLNLFPDP..LNVNFANQCGNTESHCSQIGADIKTCQSLGKTVLLSLGGGVGDYGFSDVASATKFADTLWNKFG.GEDPERPFDDAVVDGFDFDIEHGGATGYPELATALRGKFAKDSKYFLSAAPQCPYPDASLGDLLSKVPLDFAFIQFYNN.YCSIN..G.QFNYDTWSKFADPNKNIKLFVGVPATSNIAG..YVDTSKLSSAIEEIKCD..HFAGVSLWDASGAWGENFVVQVKNVL : CHI1_RHINI
CHI1_RHINI       : VNVMYYWGQNSAQGSLVSYCQSGQVDVIILSFLNKFNMGGLPEINLASACEQTFPHCPTVGSDIKTCQSNGVKVLLSLGGAAGSYGFSSDSEGQTFAETIWNLFG.GTSDTRPFDDAVIDGIDLDIEGGSSTGYAAFVTALRSKG.....FLIGAAPQCPFPDAILGSVIDAVGLDFVNVQFYNN.VCSVAS.GSSFNFDVWNDWAKPNKNIKVMLTVPGSSTAAGSGYASIAELGPIVSSVISQY.SFGGVSVWDAS...NNGFHSELYSIV : CHI2_COCIM
CHI2_COCIM       : .NLAVYWGQGAGQNRLSYFCEKTSFDIIVVGFINVFPDQGPPGSNFGNQCADSYYGCYQIKEDLPKCKALGKTILLSLGGVHDFYEVKSEESALNFADFLWGAFG.TG..PRPFGEASVDGFDFDIEKGSNFGYSIMVRRLRELFLQDLNYYISAAPQCIMPDKYLSHAISNSAFDFIFIQFYNNPSCSAKRWSVTYTVDDWVKYIRGNPLAKLFIGLPASKSAAAKEYLTPGEATKIVSTYMAKYPTFGGMMVWEATAS.GLPYADIMKEVL : D87895
D87895           : .NIAVYYGQGVNQPRLAEFCAETSYDIINIGFINSFPEQNPPGSDFGNQCWADFVHCPNIAEDIPKCQAAGKKVFLSLGGATPTYWFDTIDASTKLADFLWGASGQVADKPRPFGNAVVDGFDFDIEFFGSKGY.AHDQAFPQRFGEVDQFYISAAPQCSIPDEQLSVAIKNAVIDFFWVQFYNTPGCSARNFNG.FNYDSWVEVIKANPNANSTLGLPASGAAANLGYLTPEEVKPLVKKYMDKYPTFGGVMLWEATQA.GVGYNEKIREIL : JN0858
JN0858           : PAVTGYWQNFNNGATVQKISDVSAYDIIAVAFADATTTPGAVTFNLDSAGLGG.YTVDQFKADVRAKQAAGKKVIISVGGEKGTVSVNSSASATNFANSVYSVMR..........EYGFDGVDIDLENGLPTYMTQALRALSAKAG...PMILTMAPQTIDMQSTQGGYFQTALLTVVNMQYYNSGGCDGKVYQGTVDFLTALACIQGLAPSQVGLGLPASTRAAGGGYVSPSVVNAALDCLTKATNDLRGAMTWSTNWDAGNAWSNSVGAHV : SMACHITIN
SMACHITIN        : G.FWHNWAAGASQGQFANMNLTAEYNVVAVAFMKGQGIPTFKPYNLSDAEFR.........RQVGVLNSQGRAVLISLGGADAHIELKTGDE.....DKLKDEII......RLVEVYGFDGLDIDLEQAAANNKTVLPAALKKVKDHYGKFIISMAPEFPYLNGTYLDYINALEYDFIAPQYYNQGVDELNAWNNYYLTESLVTGTRKIPAAKFVIGLPSNNDAAATGVIDKQAVYNAFARLDAKN.SIKGLMTWSINWDNKTRYAPLIQGGV : OAU94791

                 : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131-------141-------151-------161-------171-------181-------191-------201-------211-------221-------231-------241-------251-------261-------271 :
OrigSeq          : GGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIVSNGIRSCQIQGIKVMLSLGGGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLDGIDFDIEHGSTLYWDDLARYLSAYSKQGKKVYLTAAPQCPFPDRYLGTALNTGLFDYVWVQFYNNPPCQYSSGNINNIINSWNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSSSILDSV :OrigSeq
cons             : --EEEEE-----------------EEEEEEEEE------------------------------HHHHHH---EEEEEE-----EEE----HHHHHHHHHHHHH---------------E----EE--------HHHHHHHHHHHH----EEEEE---------HHHHHHHHH----EEEEEEE---------------HHHHHHHH------EEEEE------------------HHHEHHHH--------EEEE------------------ :cons
dsc              : ---EEEE-------------------EEEEEE-----------EEE------------------HHHHH--EEEEEEE-----EEEEE--HHHHHHHHHHHHH---------HHHHHHH---EEEEE-----HHHHHHHHHHHHH-----EEE---------HHHHHHHHHH-----EEEEE----------------HHHHHHHH-----EEEEEE----------------EEHHHEEHHHH------EEEEE------------EE---- :dsc
mul              : --EEEEE-------------------EEEEHHH-------------------------------HH-----EEEEEEE---------------HHHHHH-------------------------E---------HHHHHHHHHH---------------------HHHHHHH--H-EEEEE-------------------------------EEEE------------------HHHHEHEE---------EEEE--------------E-EE :mul
nnssp            : --EEEEE-------------------EEEEEEE------------------------------HHHHH----EEEEEE-------------HHHHHHHHHH--------------------------------HHHHHHHHHHHH----EEEE-----------------------EEEEEE------------------------------EEEEE----------------HHHHHHHHHH--------EEEE-------------HHHHH :nnssp
phd              : --EEEEEE----------------EEEEEEEEEEE--------------------------HHHHHHHH---EEEEEE-----EEE----HHHHHHHHHHHHHH--------------E----EE--------HHHHHHHHHHH-----EEEEE---------HHHHHHHHH----EEEEEEE--------------HHHHHHHHH------EEEE-E------------------EEEHHH---------EEEEEE---------------- :phd
pred             : ---EEE------------------EEEEEEEE-------------------------------HHHHH---EEEEEE--------------HHHHHHHHHHHH--------------------EEE-------HHHHHHHHHHHH----EEEEE----------------------EEEEEEE------------------------------EEE-----------------------------------EEEE------------------ :pred
zpred            : -EEEEEE--------EEEE------EEEEEEEE----------EEE-----------------EHHHH---EEEEEEEE----EEEEE---HHHHHHHEEE--------------EEEEEEEHEEEH-------HHHHHHHHH-------EEEEEE--EEEE--EE-HEEEEEEEEEEEEEE------EE----------------------EEEEEE------------EEEEEEEEEEEEE------EEEEEEE-----------EEEEEE :zpred


access           : EEBBBBBBEE-EEE-BBEBBEEEEBBBBBBBBBBBBEEEE-BEBEBBE-BEEEEEEBEEBEEEBEEBEEEBBEBBBBBEEBBBBBBBBBEEEBEEBBEBBBBBBBEEEEEE-EBBEBBBEBBEBEBEEBEEEBBBBBBEBBEE-BEEBBEBBBBBBEEBE-EE-BBBEBBEEBBBEBBBBBB-EEEEBBBEEEEBEBBBEBBEEBBEE-EBBEBBBBBEBBEEBBBEE-BBBEBBBBEBBEBBEEBEEBBBBBBBB-B-E-EEEBBBBBEEBE : access

PHD Rel          : 958997626685211111124761468999998516899975336677777766666544222477751576599995687642551463457999999999973897588875522222531331378743159999999985137844877316778874212356775233214899986488634567885311334545312675424773113676523779876522112311112356646534888724457665201022569 : PHD Rel
Pred Rel         : 000557889999976555578997768888665679999998877799999999987777677858685666990900899997776767768888888777669999999999865777788008899996768899999988677906687789900999997665586666656899000999977789999865567677556889985677689899889999878986565835655789997866075677777999877776000 : Predator Rel


dssp             : -EEEEEE---HHH--HHHHHH---EEEEEEEEEEEEE--EEEEE--------HHHHHHHHHHHHHHHHH---EEEEEEE-----E----HHHHHHHHHHHHHHH----------------EEEEE--------HHHHHHHHHHH-------EEEE--E--------HHHH------EEEEE----HHH--E--E-HHHHHHHHHHHHH----EEEEEEE--HHH-------HHHHHHH-HHHH-----EEEEEEE-HHHHHHH-HHHHHHHH- :dssp
define           : -EEEEEEE------HHHHHHHH---EEEEEE---------EEEEEE-----------HHHHHHHHHHHHHEEEEEEEEE----EEEE-HHHHHHHHHHHHHHHH-EEEEE-----EEEEEEEEEEEEE----HHHHHHHHHHHHHHHEEEEEEEEEE--------HHHHHHH--EEEEEEE-------------HHHHHHHHHHHHHHH---EEEE----------EEEEEHHHHHHHHHHHHHHH----EEEE-HHHHHHHHHHHHHHH--- :define
stride           : -EEEEEE--------HHHHHHH--EEEEEEEEEEEE------EE--------HHH---HHHHHHHHHHHH--EEEEEEE-----E----HHHHHHHHHHHHHHH----------------EEEEE--------HHHHHHHHHHHHH-----EEEE--E-------HHHHHH-----EEEEE---------E--EHHHHHHHHHHHHHH----EEEEEEE------------HHHHHHHHHHHHH----EEEEEEE-HHHHHHH-HHHHHH--- :stride


Q3 values for 1hvq-1-AUTO.1  View SS in Rasmol

	dssp	define	stride
phd	67.77	62.64	72.89
dsc	60.07	63.37	66.67
pred	59.71	53.85	63.74
mul	57.88	52.38	62.64
nnssp	64.47	55.68	67.77
zpred	52.38	54.58	56.04
cons	67.40	63.37	73.26